Protein–RNA interactions for Protein: O76009

KRT33A, Keratin, type I cuticular Ha3-I, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT33AO76009 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT33AO76009 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT33AO76009 AC134043.2-201ENST00000624206 2238 ntBASIC16.23■□□□□ 0.19
KRT33AO76009 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
KRT33AO76009 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT33AO76009 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
KRT33AO76009 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT33AO76009 SIRPAP1-201ENST00000448467 1770 ntBASIC16.23■□□□□ 0.19
KRT33AO76009 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT33AO76009 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
KRT33AO76009 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
KRT33AO76009 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT33AO76009 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT33AO76009 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT33AO76009 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
KRT33AO76009 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT33AO76009 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.22■□□□□ 0.19
KRT33AO76009 GMCL1P1-201ENST00000463439 1581 ntBASIC16.22■□□□□ 0.19
KRT33AO76009 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.22■□□□□ 0.19
KRT33AO76009 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
KRT33AO76009 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT33AO76009 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT33AO76009 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
KRT33AO76009 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.22■□□□□ 0.19
KRT33AO76009 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.22■□□□□ 0.19
KRT33AO76009 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT33AO76009 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT33AO76009 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT33AO76009 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.22■□□□□ 0.19
KRT33AO76009 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT33AO76009 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT33AO76009 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT33AO76009 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT33AO76009 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
KRT33AO76009 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
KRT33AO76009 SPDYE15P-201ENST00000424157 909 ntBASIC16.22■□□□□ 0.19
KRT33AO76009 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.22■□□□□ 0.19
KRT33AO76009 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.22■□□□□ 0.19
KRT33AO76009 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT33AO76009 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.22■□□□□ 0.19
KRT33AO76009 AC008687.5-201ENST00000593746 558 ntBASIC16.22■□□□□ 0.19
KRT33AO76009 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.22■□□□□ 0.19
KRT33AO76009 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.22■□□□□ 0.19
KRT33AO76009 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.22■□□□□ 0.19
KRT33AO76009 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.22■□□□□ 0.19
KRT33AO76009 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
KRT33AO76009 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
KRT33AO76009 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
KRT33AO76009 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
KRT33AO76009 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
KRT33AO76009 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.22■□□□□ 0.19
KRT33AO76009 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
KRT33AO76009 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
KRT33AO76009 FER1L4-210ENST00000615531 5998 ntBASIC16.21■□□□□ 0.19
KRT33AO76009 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.21■□□□□ 0.19
KRT33AO76009 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT33AO76009 FLJ16779-201ENST00000612722 7638 ntBASIC16.21■□□□□ 0.19
KRT33AO76009 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT33AO76009 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
KRT33AO76009 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
KRT33AO76009 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
KRT33AO76009 LINC01311-201ENST00000565162 1445 ntBASIC16.21■□□□□ 0.19
KRT33AO76009 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT33AO76009 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT33AO76009 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT33AO76009 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
KRT33AO76009 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
KRT33AO76009 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
KRT33AO76009 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT33AO76009 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.21■□□□□ 0.19
KRT33AO76009 PVRIG2P-201ENST00000435460 978 ntBASIC16.21■□□□□ 0.19
KRT33AO76009 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.21■□□□□ 0.19
KRT33AO76009 AL671277.2-201ENST00000458060 996 ntBASIC16.21■□□□□ 0.19
KRT33AO76009 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.21■□□□□ 0.19
KRT33AO76009 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.21■□□□□ 0.19
KRT33AO76009 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.21■□□□□ 0.19
KRT33AO76009 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.21■□□□□ 0.19
KRT33AO76009 NTF6B-201ENST00000591913 560 ntBASIC16.21■□□□□ 0.19
KRT33AO76009 AL136038.4-201ENST00000603606 1261 ntBASIC16.21■□□□□ 0.19
KRT33AO76009 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.21■□□□□ 0.19
KRT33AO76009 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.21■□□□□ 0.19
KRT33AO76009 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
KRT33AO76009 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
KRT33AO76009 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT33AO76009 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT33AO76009 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
KRT33AO76009 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.21■□□□□ 0.18
KRT33AO76009 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
KRT33AO76009 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
KRT33AO76009 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT33AO76009 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT33AO76009 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.2■□□□□ 0.18
KRT33AO76009 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT33AO76009 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT33AO76009 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT33AO76009 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT33AO76009 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
KRT33AO76009 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT33AO76009 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT33AO76009 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms