Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TTC9CQ8N5M4 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TTC9CQ8N5M4 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
TTC9CQ8N5M4 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TTC9CQ8N5M4 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC14.17□□□□□ -0.14
TTC9CQ8N5M4 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TTC9CQ8N5M4 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
TTC9CQ8N5M4 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
TTC9CQ8N5M4 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
TTC9CQ8N5M4 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC14.17□□□□□ -0.14
TTC9CQ8N5M4 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC14.17□□□□□ -0.14
TTC9CQ8N5M4 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TTC9CQ8N5M4 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC14.16□□□□□ -0.14
TTC9CQ8N5M4 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TTC9CQ8N5M4 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC14.16□□□□□ -0.14
TTC9CQ8N5M4 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC14.16□□□□□ -0.14
TTC9CQ8N5M4 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TTC9CQ8N5M4 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
TTC9CQ8N5M4 LINC01311-201ENST00000565162 1445 ntBASIC14.16□□□□□ -0.14
TTC9CQ8N5M4 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC14.16□□□□□ -0.14
TTC9CQ8N5M4 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TTC9CQ8N5M4 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TTC9CQ8N5M4 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC14.16□□□□□ -0.14
TTC9CQ8N5M4 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
TTC9CQ8N5M4 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
TTC9CQ8N5M4 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TTC9CQ8N5M4 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TTC9CQ8N5M4 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC14.16□□□□□ -0.14
TTC9CQ8N5M4 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TTC9CQ8N5M4 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TTC9CQ8N5M4 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
TTC9CQ8N5M4 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
TTC9CQ8N5M4 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TTC9CQ8N5M4 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TTC9CQ8N5M4 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TTC9CQ8N5M4 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
TTC9CQ8N5M4 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TTC9CQ8N5M4 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC14.16□□□□□ -0.14
TTC9CQ8N5M4 DDT-203ENST00000403754 569 ntTSL 3 BASIC14.16□□□□□ -0.14
TTC9CQ8N5M4 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TTC9CQ8N5M4 TMPOP1-202ENST00000424642 1267 ntBASIC14.16□□□□□ -0.14
TTC9CQ8N5M4 DDT-206ENST00000430101 573 ntTSL 2 BASIC14.16□□□□□ -0.14
TTC9CQ8N5M4 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC14.16□□□□□ -0.14
TTC9CQ8N5M4 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC14.16□□□□□ -0.14
TTC9CQ8N5M4 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC14.16□□□□□ -0.14
TTC9CQ8N5M4 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC14.16□□□□□ -0.14
TTC9CQ8N5M4 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TTC9CQ8N5M4 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
TTC9CQ8N5M4 AC134043.2-201ENST00000624206 2238 ntBASIC14.16□□□□□ -0.14
TTC9CQ8N5M4 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TTC9CQ8N5M4 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TTC9CQ8N5M4 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
TTC9CQ8N5M4 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TTC9CQ8N5M4 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TTC9CQ8N5M4 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TTC9CQ8N5M4 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
TTC9CQ8N5M4 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TTC9CQ8N5M4 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
TTC9CQ8N5M4 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TTC9CQ8N5M4 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
TTC9CQ8N5M4 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TTC9CQ8N5M4 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TTC9CQ8N5M4 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TTC9CQ8N5M4 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
TTC9CQ8N5M4 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TTC9CQ8N5M4 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC14.15□□□□□ -0.14
TTC9CQ8N5M4 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TTC9CQ8N5M4 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC14.15□□□□□ -0.14
TTC9CQ8N5M4 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TTC9CQ8N5M4 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TTC9CQ8N5M4 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TTC9CQ8N5M4 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC14.15□□□□□ -0.14
TTC9CQ8N5M4 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TTC9CQ8N5M4 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC14.15□□□□□ -0.14
TTC9CQ8N5M4 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TTC9CQ8N5M4 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TTC9CQ8N5M4 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TTC9CQ8N5M4 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TTC9CQ8N5M4 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TTC9CQ8N5M4 GNE-204ENST00000539208 2190 ntTSL 2 BASIC14.15□□□□□ -0.14
TTC9CQ8N5M4 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TTC9CQ8N5M4 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
TTC9CQ8N5M4 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TTC9CQ8N5M4 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TTC9CQ8N5M4 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC14.15□□□□□ -0.14
TTC9CQ8N5M4 IGHGP-201ENST00000390555 1178 ntBASIC14.15□□□□□ -0.14
TTC9CQ8N5M4 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TTC9CQ8N5M4 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC14.15□□□□□ -0.14
TTC9CQ8N5M4 DUX4L26-201ENST00000489078 1255 ntBASIC14.15□□□□□ -0.14
TTC9CQ8N5M4 AC022616.7-201ENST00000525383 220 ntBASIC14.15□□□□□ -0.14
TTC9CQ8N5M4 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC14.15□□□□□ -0.14
TTC9CQ8N5M4 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC14.15□□□□□ -0.14
TTC9CQ8N5M4 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC14.15□□□□□ -0.14
TTC9CQ8N5M4 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC14.15□□□□□ -0.14
TTC9CQ8N5M4 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC14.15□□□□□ -0.14
TTC9CQ8N5M4 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC14.15□□□□□ -0.14
TTC9CQ8N5M4 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC14.15□□□□□ -0.14
TTC9CQ8N5M4 AC116407.2-201ENST00000613639 860 ntBASIC14.15□□□□□ -0.14
TTC9CQ8N5M4 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC14.15□□□□□ -0.14
TTC9CQ8N5M4 AC004263.2-201ENST00000617183 678 ntBASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms