Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.06■□□□□ 0.8
ACTN4O43707 KRT18P48-201ENST00000434763 852 ntBASIC20.06■□□□□ 0.8
ACTN4O43707 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.06■□□□□ 0.8
ACTN4O43707 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ACTN4O43707 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ACTN4O43707 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC20.06■□□□□ 0.8
ACTN4O43707 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
ACTN4O43707 AC006011.2-201ENST00000621313 1158 ntBASIC20.06■□□□□ 0.8
ACTN4O43707 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
ACTN4O43707 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC20.06■□□□□ 0.8
ACTN4O43707 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
ACTN4O43707 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ACTN4O43707 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20.06■□□□□ 0.8
ACTN4O43707 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
ACTN4O43707 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ACTN4O43707 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ACTN4O43707 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC20.05■□□□□ 0.8
ACTN4O43707 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ACTN4O43707 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
ACTN4O43707 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ACTN4O43707 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC20.05■□□□□ 0.8
ACTN4O43707 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
ACTN4O43707 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ACTN4O43707 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ACTN4O43707 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
ACTN4O43707 KRT18P57-201ENST00000443599 1254 ntBASIC20.05■□□□□ 0.8
ACTN4O43707 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ACTN4O43707 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.05■□□□□ 0.8
ACTN4O43707 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC20.05■□□□□ 0.8
ACTN4O43707 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC20.05■□□□□ 0.8
ACTN4O43707 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ACTN4O43707 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ACTN4O43707 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ACTN4O43707 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC20.05■□□□□ 0.8
ACTN4O43707 HLA-J-201ENST00000462773 1622 ntBASIC20.05■□□□□ 0.8
ACTN4O43707 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC20.05■□□□□ 0.8
ACTN4O43707 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20.05■□□□□ 0.8
ACTN4O43707 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ACTN4O43707 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ACTN4O43707 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ACTN4O43707 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC20.04■□□□□ 0.8
ACTN4O43707 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
ACTN4O43707 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
ACTN4O43707 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ACTN4O43707 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ACTN4O43707 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ACTN4O43707 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
ACTN4O43707 AC080080.1-201ENST00000625121 2420 ntBASIC20.04■□□□□ 0.8
ACTN4O43707 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
ACTN4O43707 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
ACTN4O43707 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ACTN4O43707 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ACTN4O43707 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ACTN4O43707 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC20.04■□□□□ 0.8
ACTN4O43707 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ACTN4O43707 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
ACTN4O43707 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
ACTN4O43707 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
ACTN4O43707 IGHGP-201ENST00000390555 1178 ntBASIC20.04■□□□□ 0.8
ACTN4O43707 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ACTN4O43707 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC20.04■□□□□ 0.8
ACTN4O43707 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC20.04■□□□□ 0.8
ACTN4O43707 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
ACTN4O43707 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
ACTN4O43707 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.04■□□□□ 0.8
ACTN4O43707 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC20.04■□□□□ 0.8
ACTN4O43707 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.04■□□□□ 0.8
ACTN4O43707 GXYLT1P4-201ENST00000613576 1192 ntBASIC20.04■□□□□ 0.8
ACTN4O43707 HYMAI.1-201ENST00000620949 238 ntBASIC20.04■□□□□ 0.8
ACTN4O43707 AC009154.2-201ENST00000621177 724 ntBASIC20.04■□□□□ 0.8
ACTN4O43707 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC20.04■□□□□ 0.8
ACTN4O43707 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC20.04■□□□□ 0.8
ACTN4O43707 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ACTN4O43707 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ACTN4O43707 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC20.04■□□□□ 0.8
ACTN4O43707 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ACTN4O43707 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
ACTN4O43707 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ACTN4O43707 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ACTN4O43707 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ACTN4O43707 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ACTN4O43707 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ACTN4O43707 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
ACTN4O43707 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ACTN4O43707 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
ACTN4O43707 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ACTN4O43707 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ACTN4O43707 HBZP1-201ENST00000354915 429 ntBASIC20.03■□□□□ 0.8
ACTN4O43707 MIR662-201ENST00000384847 95 ntBASIC20.03■□□□□ 0.8
ACTN4O43707 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ACTN4O43707 DDX43P3-201ENST00000441064 443 ntBASIC20.03■□□□□ 0.8
ACTN4O43707 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ACTN4O43707 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
ACTN4O43707 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.03■□□□□ 0.8
ACTN4O43707 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC20.03■□□□□ 0.8
ACTN4O43707 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ACTN4O43707 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.03■□□□□ 0.8
ACTN4O43707 AC116407.2-201ENST00000613639 860 ntBASIC20.03■□□□□ 0.8
ACTN4O43707 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ACTN4O43707 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms