Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
CHKB-CPT1BH3BT56 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC9.93□□□□□ -0.82
CHKB-CPT1BH3BT56 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC9.93□□□□□ -0.82
CHKB-CPT1BH3BT56 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
CHKB-CPT1BH3BT56 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
CHKB-CPT1BH3BT56 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC9.93□□□□□ -0.82
CHKB-CPT1BH3BT56 CACNA1C-219ENST00000399649 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
CHKB-CPT1BH3BT56 AKAP13-202ENST00000394510 9128 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
CHKB-CPT1BH3BT56 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
CHKB-CPT1BH3BT56 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
CHKB-CPT1BH3BT56 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
CHKB-CPT1BH3BT56 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
CHKB-CPT1BH3BT56 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC9.93□□□□□ -0.82
CHKB-CPT1BH3BT56 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
CHKB-CPT1BH3BT56 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
CHKB-CPT1BH3BT56 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
CHKB-CPT1BH3BT56 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
CHKB-CPT1BH3BT56 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
CHKB-CPT1BH3BT56 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
CHKB-CPT1BH3BT56 NR3C2-203ENST00000358102 5893 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
CHKB-CPT1BH3BT56 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
CHKB-CPT1BH3BT56 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
CHKB-CPT1BH3BT56 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
CHKB-CPT1BH3BT56 TG-201ENST00000220616 8450 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
CHKB-CPT1BH3BT56 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
CHKB-CPT1BH3BT56 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC9.93□□□□□ -0.82
CHKB-CPT1BH3BT56 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC9.93□□□□□ -0.82
CHKB-CPT1BH3BT56 CNTNAP3P2-201ENST00000617175 3861 ntBASIC9.93□□□□□ -0.82
CHKB-CPT1BH3BT56 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
CHKB-CPT1BH3BT56 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
CHKB-CPT1BH3BT56 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
CHKB-CPT1BH3BT56 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC9.93□□□□□ -0.82
CHKB-CPT1BH3BT56 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
CHKB-CPT1BH3BT56 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC9.93□□□□□ -0.82
CHKB-CPT1BH3BT56 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
CHKB-CPT1BH3BT56 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
CHKB-CPT1BH3BT56 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
CHKB-CPT1BH3BT56 CACUL1-201ENST00000369151 11311 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
CHKB-CPT1BH3BT56 NUMA1-205ENST00000393695 7343 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
CHKB-CPT1BH3BT56 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
CHKB-CPT1BH3BT56 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC9.92□□□□□ -0.82
CHKB-CPT1BH3BT56 MYO7A-201ENST00000409619 7106 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
CHKB-CPT1BH3BT56 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
CHKB-CPT1BH3BT56 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC9.92□□□□□ -0.82
CHKB-CPT1BH3BT56 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC9.92□□□□□ -0.82
CHKB-CPT1BH3BT56 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC9.92□□□□□ -0.82
CHKB-CPT1BH3BT56 EXOC8-201ENST00000366645 5100 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
CHKB-CPT1BH3BT56 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC9.92□□□□□ -0.82
CHKB-CPT1BH3BT56 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
CHKB-CPT1BH3BT56 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
CHKB-CPT1BH3BT56 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC9.92□□□□□ -0.82
CHKB-CPT1BH3BT56 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC9.92□□□□□ -0.82
CHKB-CPT1BH3BT56 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC9.92□□□□□ -0.82
CHKB-CPT1BH3BT56 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC9.92□□□□□ -0.82
CHKB-CPT1BH3BT56 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC9.92□□□□□ -0.82
CHKB-CPT1BH3BT56 STRC-213ENST00000541030 5305 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
CHKB-CPT1BH3BT56 LRRC15-201ENST00000347624 5883 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
CHKB-CPT1BH3BT56 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC9.92□□□□□ -0.82
CHKB-CPT1BH3BT56 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC9.92□□□□□ -0.82
CHKB-CPT1BH3BT56 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
CHKB-CPT1BH3BT56 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
CHKB-CPT1BH3BT56 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC9.92□□□□□ -0.82
CHKB-CPT1BH3BT56 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
CHKB-CPT1BH3BT56 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
CHKB-CPT1BH3BT56 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC9.92□□□□□ -0.82
CHKB-CPT1BH3BT56 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC9.92□□□□□ -0.82
CHKB-CPT1BH3BT56 TMEM120B-204ENST00000449592 7461 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
CHKB-CPT1BH3BT56 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
CHKB-CPT1BH3BT56 CLTA-206ENST00000466396 695 ntTSL 2 BASIC9.92□□□□□ -0.82
CHKB-CPT1BH3BT56 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC9.92□□□□□ -0.82
CHKB-CPT1BH3BT56 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC9.92□□□□□ -0.82
CHKB-CPT1BH3BT56 AL117332.1-201ENST00000622628 974 ntBASIC9.92□□□□□ -0.82
CHKB-CPT1BH3BT56 AC129492.7-201ENST00000622992 756 ntBASIC9.92□□□□□ -0.82
CHKB-CPT1BH3BT56 NARF-204ENST00000390006 1766 ntTSL 2 BASIC9.92□□□□□ -0.82
CHKB-CPT1BH3BT56 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
CHKB-CPT1BH3BT56 GCK-209ENST00000616242 2260 ntTSL 5 BASIC9.92□□□□□ -0.82
CHKB-CPT1BH3BT56 C15orf40-201ENST00000304177 11244 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
CHKB-CPT1BH3BT56 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC9.92□□□□□ -0.82
CHKB-CPT1BH3BT56 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC9.92□□□□□ -0.82
CHKB-CPT1BH3BT56 ANO7L1-203ENST00000602586 1720 ntBASIC9.92□□□□□ -0.82
CHKB-CPT1BH3BT56 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
CHKB-CPT1BH3BT56 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
CHKB-CPT1BH3BT56 NUMA1-234ENST00000620566 7012 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
CHKB-CPT1BH3BT56 TEX21P-204ENST00000641479 1693 ntBASIC9.92□□□□□ -0.82
CHKB-CPT1BH3BT56 MYO7A-205ENST00000458637 7336 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
CHKB-CPT1BH3BT56 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
CHKB-CPT1BH3BT56 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
CHKB-CPT1BH3BT56 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
CHKB-CPT1BH3BT56 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC9.92□□□□□ -0.82
CHKB-CPT1BH3BT56 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC9.92□□□□□ -0.82
CHKB-CPT1BH3BT56 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
CHKB-CPT1BH3BT56 AP002414.2-201ENST00000591780 3365 ntBASIC9.92□□□□□ -0.82
CHKB-CPT1BH3BT56 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
CHKB-CPT1BH3BT56 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC9.92□□□□□ -0.82
CHKB-CPT1BH3BT56 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
CHKB-CPT1BH3BT56 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
CHKB-CPT1BH3BT56 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
CHKB-CPT1BH3BT56 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
CHKB-CPT1BH3BT56 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
CHKB-CPT1BH3BT56 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms