Protein–RNA interactions for Protein: Q9BQJ4

TMEM47, Transmembrane protein 47, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47Q9BQJ4 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TMEM47Q9BQJ4 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TMEM47Q9BQJ4 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
TMEM47Q9BQJ4 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
TMEM47Q9BQJ4 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
TMEM47Q9BQJ4 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
TMEM47Q9BQJ4 ADM-208ENST00000534464 1640 ntTSL 2 BASIC20.78■□□□□ 0.92
TMEM47Q9BQJ4 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
TMEM47Q9BQJ4 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TMEM47Q9BQJ4 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TMEM47Q9BQJ4 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
TMEM47Q9BQJ4 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.77■□□□□ 0.92
TMEM47Q9BQJ4 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TMEM47Q9BQJ4 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.77■□□□□ 0.92
TMEM47Q9BQJ4 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.77■□□□□ 0.92
TMEM47Q9BQJ4 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TMEM47Q9BQJ4 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TMEM47Q9BQJ4 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC20.77■□□□□ 0.92
TMEM47Q9BQJ4 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TMEM47Q9BQJ4 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
TMEM47Q9BQJ4 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
TMEM47Q9BQJ4 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TMEM47Q9BQJ4 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
TMEM47Q9BQJ4 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TMEM47Q9BQJ4 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC20.77■□□□□ 0.92
TMEM47Q9BQJ4 CTNS-203ENST00000399306 803 ntTSL 3 BASIC20.77■□□□□ 0.92
TMEM47Q9BQJ4 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
TMEM47Q9BQJ4 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC20.77■□□□□ 0.92
TMEM47Q9BQJ4 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
TMEM47Q9BQJ4 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TMEM47Q9BQJ4 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.77■□□□□ 0.92
TMEM47Q9BQJ4 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TMEM47Q9BQJ4 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
TMEM47Q9BQJ4 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TMEM47Q9BQJ4 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.77■□□□□ 0.91
TMEM47Q9BQJ4 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
TMEM47Q9BQJ4 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TMEM47Q9BQJ4 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.76■□□□□ 0.91
TMEM47Q9BQJ4 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM47Q9BQJ4 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC20.76■□□□□ 0.91
TMEM47Q9BQJ4 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC20.76■□□□□ 0.91
TMEM47Q9BQJ4 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM47Q9BQJ4 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC20.76■□□□□ 0.91
TMEM47Q9BQJ4 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM47Q9BQJ4 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM47Q9BQJ4 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.76■□□□□ 0.91
TMEM47Q9BQJ4 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM47Q9BQJ4 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.76■□□□□ 0.91
TMEM47Q9BQJ4 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM47Q9BQJ4 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM47Q9BQJ4 COX5BP2-201ENST00000392354 334 ntBASIC20.76■□□□□ 0.91
TMEM47Q9BQJ4 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM47Q9BQJ4 RBSN-204ENST00000449050 903 ntTSL 2 BASIC20.76■□□□□ 0.91
TMEM47Q9BQJ4 PON3-205ENST00000451904 1053 ntTSL 3 BASIC20.76■□□□□ 0.91
TMEM47Q9BQJ4 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20.76■□□□□ 0.91
TMEM47Q9BQJ4 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC20.76■□□□□ 0.91
TMEM47Q9BQJ4 AC106795.1-205ENST00000512851 1056 ntBASIC20.76■□□□□ 0.91
TMEM47Q9BQJ4 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM47Q9BQJ4 AL160237.2-201ENST00000556165 472 ntBASIC20.76■□□□□ 0.91
TMEM47Q9BQJ4 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC20.76■□□□□ 0.91
TMEM47Q9BQJ4 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM47Q9BQJ4 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC20.76■□□□□ 0.91
TMEM47Q9BQJ4 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC20.76■□□□□ 0.91
TMEM47Q9BQJ4 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.76■□□□□ 0.91
TMEM47Q9BQJ4 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM47Q9BQJ4 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM47Q9BQJ4 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM47Q9BQJ4 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
TMEM47Q9BQJ4 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.76■□□□□ 0.91
TMEM47Q9BQJ4 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM47Q9BQJ4 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.76■□□□□ 0.91
TMEM47Q9BQJ4 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TMEM47Q9BQJ4 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC20.76■□□□□ 0.91
TMEM47Q9BQJ4 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.76■□□□□ 0.91
TMEM47Q9BQJ4 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TMEM47Q9BQJ4 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TMEM47Q9BQJ4 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC20.75■□□□□ 0.91
TMEM47Q9BQJ4 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TMEM47Q9BQJ4 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.75■□□□□ 0.91
TMEM47Q9BQJ4 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC20.75■□□□□ 0.91
TMEM47Q9BQJ4 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.75■□□□□ 0.91
TMEM47Q9BQJ4 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TMEM47Q9BQJ4 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TMEM47Q9BQJ4 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TMEM47Q9BQJ4 CD9-202ENST00000382515 1229 ntTSL 5 BASIC20.75■□□□□ 0.91
TMEM47Q9BQJ4 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TMEM47Q9BQJ4 ABCD1P5-201ENST00000445663 754 ntBASIC20.75■□□□□ 0.91
TMEM47Q9BQJ4 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20.75■□□□□ 0.91
TMEM47Q9BQJ4 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20.75■□□□□ 0.91
TMEM47Q9BQJ4 AC009078.2-202ENST00000463353 338 ntBASIC20.75■□□□□ 0.91
TMEM47Q9BQJ4 AC122714.2-201ENST00000502787 707 ntBASIC20.75■□□□□ 0.91
TMEM47Q9BQJ4 VPS51-217ENST00000639871 243 ntTSL 5 BASIC20.75■□□□□ 0.91
TMEM47Q9BQJ4 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TMEM47Q9BQJ4 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TMEM47Q9BQJ4 AP005117.1-201ENST00000584346 1413 ntBASIC20.75■□□□□ 0.91
TMEM47Q9BQJ4 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC20.75■□□□□ 0.91
TMEM47Q9BQJ4 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TMEM47Q9BQJ4 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC20.75■□□□□ 0.91
TMEM47Q9BQJ4 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TMEM47Q9BQJ4 CD276-201ENST00000318424 2738 ntTSL 5 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms