Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
U2AF1L4Q8WU68 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
U2AF1L4Q8WU68 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
U2AF1L4Q8WU68 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
U2AF1L4Q8WU68 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
U2AF1L4Q8WU68 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.45■□□□□ 0.86
U2AF1L4Q8WU68 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
U2AF1L4Q8WU68 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
U2AF1L4Q8WU68 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
U2AF1L4Q8WU68 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.44■□□□□ 0.86
U2AF1L4Q8WU68 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.44■□□□□ 0.86
U2AF1L4Q8WU68 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
U2AF1L4Q8WU68 BEX3-201ENST00000361298 921 ntTSL 2 BASIC20.44■□□□□ 0.86
U2AF1L4Q8WU68 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
U2AF1L4Q8WU68 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC20.44■□□□□ 0.86
U2AF1L4Q8WU68 FAM8A3P-201ENST00000427218 844 ntBASIC20.44■□□□□ 0.86
U2AF1L4Q8WU68 CRCP-205ENST00000431089 942 ntTSL 2 BASIC20.44■□□□□ 0.86
U2AF1L4Q8WU68 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.44■□□□□ 0.86
U2AF1L4Q8WU68 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.44■□□□□ 0.86
U2AF1L4Q8WU68 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.44■□□□□ 0.86
U2AF1L4Q8WU68 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC20.44■□□□□ 0.86
U2AF1L4Q8WU68 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
U2AF1L4Q8WU68 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
U2AF1L4Q8WU68 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
U2AF1L4Q8WU68 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
U2AF1L4Q8WU68 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
U2AF1L4Q8WU68 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
U2AF1L4Q8WU68 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
U2AF1L4Q8WU68 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
U2AF1L4Q8WU68 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
U2AF1L4Q8WU68 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
U2AF1L4Q8WU68 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
U2AF1L4Q8WU68 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
U2AF1L4Q8WU68 AP002414.3-201ENST00000589352 1468 ntBASIC20.43■□□□□ 0.86
U2AF1L4Q8WU68 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
U2AF1L4Q8WU68 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
U2AF1L4Q8WU68 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
U2AF1L4Q8WU68 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
U2AF1L4Q8WU68 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.43■□□□□ 0.86
U2AF1L4Q8WU68 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
U2AF1L4Q8WU68 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.43■□□□□ 0.86
U2AF1L4Q8WU68 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
U2AF1L4Q8WU68 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
U2AF1L4Q8WU68 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC20.43■□□□□ 0.86
U2AF1L4Q8WU68 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
U2AF1L4Q8WU68 AC068472.1-201ENST00000474589 881 ntBASIC20.43■□□□□ 0.86
U2AF1L4Q8WU68 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC20.43■□□□□ 0.86
U2AF1L4Q8WU68 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC20.43■□□□□ 0.86
U2AF1L4Q8WU68 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC20.43■□□□□ 0.86
U2AF1L4Q8WU68 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
U2AF1L4Q8WU68 AC011467.2-201ENST00000598425 242 ntBASIC20.43■□□□□ 0.86
U2AF1L4Q8WU68 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC20.43■□□□□ 0.86
U2AF1L4Q8WU68 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
U2AF1L4Q8WU68 FEM1AP3-201ENST00000403722 1741 ntBASIC20.43■□□□□ 0.86
U2AF1L4Q8WU68 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.43■□□□□ 0.86
U2AF1L4Q8WU68 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC20.43■□□□□ 0.86
U2AF1L4Q8WU68 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
U2AF1L4Q8WU68 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
U2AF1L4Q8WU68 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
U2AF1L4Q8WU68 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
U2AF1L4Q8WU68 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
U2AF1L4Q8WU68 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
U2AF1L4Q8WU68 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
U2AF1L4Q8WU68 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC20.43■□□□□ 0.86
U2AF1L4Q8WU68 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
U2AF1L4Q8WU68 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
U2AF1L4Q8WU68 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
U2AF1L4Q8WU68 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.42■□□□□ 0.86
U2AF1L4Q8WU68 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
U2AF1L4Q8WU68 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
U2AF1L4Q8WU68 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
U2AF1L4Q8WU68 PON3-203ENST00000427422 894 ntTSL 3 BASIC20.42■□□□□ 0.86
U2AF1L4Q8WU68 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC20.42■□□□□ 0.86
U2AF1L4Q8WU68 AC244107.1-201ENST00000442033 332 ntBASIC20.42■□□□□ 0.86
U2AF1L4Q8WU68 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
U2AF1L4Q8WU68 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC20.42■□□□□ 0.86
U2AF1L4Q8WU68 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC20.42■□□□□ 0.86
U2AF1L4Q8WU68 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC20.42■□□□□ 0.86
U2AF1L4Q8WU68 SNHG9-202ENST00000564014 471 ntBASIC20.42■□□□□ 0.86
U2AF1L4Q8WU68 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC20.42■□□□□ 0.86
U2AF1L4Q8WU68 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC20.42■□□□□ 0.86
U2AF1L4Q8WU68 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
U2AF1L4Q8WU68 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
U2AF1L4Q8WU68 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
U2AF1L4Q8WU68 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
U2AF1L4Q8WU68 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
U2AF1L4Q8WU68 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
U2AF1L4Q8WU68 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
U2AF1L4Q8WU68 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
U2AF1L4Q8WU68 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
U2AF1L4Q8WU68 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
U2AF1L4Q8WU68 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
U2AF1L4Q8WU68 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
U2AF1L4Q8WU68 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
U2AF1L4Q8WU68 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
U2AF1L4Q8WU68 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC20.42■□□□□ 0.86
U2AF1L4Q8WU68 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.42■□□□□ 0.86
U2AF1L4Q8WU68 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.42■□□□□ 0.86
U2AF1L4Q8WU68 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
U2AF1L4Q8WU68 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms