Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
RPS28P62857 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC10.32□□□□□ -0.76
RPS28P62857 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
RPS28P62857 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
RPS28P62857 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC10.32□□□□□ -0.76
RPS28P62857 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
RPS28P62857 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
RPS28P62857 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
RPS28P62857 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
RPS28P62857 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
RPS28P62857 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
RPS28P62857 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
RPS28P62857 NME9-203ENST00000383180 2133 ntTSL 2 BASIC10.32□□□□□ -0.76
RPS28P62857 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
RPS28P62857 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC10.32□□□□□ -0.76
RPS28P62857 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
RPS28P62857 RPS2-210ENST00000530225 765 ntTSL 2 BASIC10.32□□□□□ -0.76
RPS28P62857 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
RPS28P62857 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
RPS28P62857 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
RPS28P62857 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
RPS28P62857 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
RPS28P62857 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
RPS28P62857 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC10.32□□□□□ -0.76
RPS28P62857 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
RPS28P62857 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
RPS28P62857 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
RPS28P62857 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
RPS28P62857 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
RPS28P62857 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
RPS28P62857 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
RPS28P62857 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC10.32□□□□□ -0.76
RPS28P62857 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
RPS28P62857 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC10.32□□□□□ -0.76
RPS28P62857 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC10.32□□□□□ -0.76
RPS28P62857 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC10.32□□□□□ -0.76
RPS28P62857 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
RPS28P62857 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
RPS28P62857 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
RPS28P62857 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
RPS28P62857 EI24-212ENST00000615917 1407 ntTSL 2 BASIC10.32□□□□□ -0.76
RPS28P62857 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
RPS28P62857 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC10.32□□□□□ -0.76
RPS28P62857 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC10.32□□□□□ -0.76
RPS28P62857 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC10.32□□□□□ -0.76
RPS28P62857 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC10.32□□□□□ -0.76
RPS28P62857 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
RPS28P62857 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
RPS28P62857 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
RPS28P62857 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
RPS28P62857 AMT-221ENST00000538581 2038 ntTSL 2 BASIC10.31□□□□□ -0.76
RPS28P62857 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
RPS28P62857 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
RPS28P62857 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC10.31□□□□□ -0.76
RPS28P62857 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
RPS28P62857 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC10.31□□□□□ -0.76
RPS28P62857 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
RPS28P62857 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC10.31□□□□□ -0.76
RPS28P62857 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
RPS28P62857 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC10.31□□□□□ -0.76
RPS28P62857 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC10.31□□□□□ -0.76
RPS28P62857 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
RPS28P62857 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
RPS28P62857 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
RPS28P62857 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC10.31□□□□□ -0.76
RPS28P62857 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
RPS28P62857 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
RPS28P62857 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC10.31□□□□□ -0.76
RPS28P62857 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
RPS28P62857 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC10.31□□□□□ -0.76
RPS28P62857 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
RPS28P62857 OR7E47P-201ENST00000546390 1422 ntBASIC10.31□□□□□ -0.76
RPS28P62857 DENND3-221ENST00000523308 2959 ntTSL 2 BASIC10.31□□□□□ -0.76
RPS28P62857 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
RPS28P62857 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
RPS28P62857 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
RPS28P62857 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
RPS28P62857 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
RPS28P62857 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
RPS28P62857 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
RPS28P62857 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC10.31□□□□□ -0.76
RPS28P62857 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC10.31□□□□□ -0.76
RPS28P62857 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
RPS28P62857 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
RPS28P62857 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC10.31□□□□□ -0.76
RPS28P62857 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
RPS28P62857 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
RPS28P62857 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC10.3□□□□□ -0.76
RPS28P62857 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
RPS28P62857 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
RPS28P62857 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
RPS28P62857 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC10.3□□□□□ -0.76
RPS28P62857 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC10.3□□□□□ -0.76
RPS28P62857 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
RPS28P62857 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
RPS28P62857 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC10.3□□□□□ -0.76
RPS28P62857 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
RPS28P62857 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC10.3□□□□□ -0.76
RPS28P62857 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
RPS28P62857 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms