Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 PIGG-203ENST00000453061 3218 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.175e-7■■□□□ 14.4
MATR3P43243 FBXO34-203ENST00000554940 577 ntTSL 413.99□□□□□ -0.175e-7■■□□□ 14.4
MATR3P43243 ACAD11-207ENST00000489991 574 ntTSL 413.94□□□□□ -0.185e-7■■□□□ 14.4
MATR3P43243 STRN-201ENST00000263918 8168 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.185e-7■■□□□ 14.4
MATR3P43243 FBXO34-202ENST00000440021 2831 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.215e-7■■□□□ 14.4
MATR3P43243 PIGG-201ENST00000310340 3203 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.215e-7■■□□□ 14.4
MATR3P43243 SIRT5-204ENST00000397350 4382 ntTSL 1 (best) BASIC13.34□□□□□ -0.272e-6■■□□□ 14.4
MATR3P43243 DCAF5-206ENST00000554681 759 ntTSL 213.28□□□□□ -0.285e-7■■□□□ 14.4
MATR3P43243 TRIM25-205ENST00000572021 1555 ntTSL 1 (best)13.05□□□□□ -0.325e-7■■□□□ 14.4
MATR3P43243 DCAF5-207ENST00000556111 728 ntTSL 312.7□□□□□ -0.385e-7■■□□□ 14.4
MATR3P43243 DCAF5-202ENST00000389997 2837 ntTSL 1 (best) BASIC12.59□□□□□ -0.395e-7■■□□□ 14.4
MATR3P43243 PPARA-208ENST00000481567 567 ntTSL 1 (best)12.59□□□□□ -0.395e-7■■□□□ 14.4
MATR3P43243 RPS6KB1-201ENST00000225577 5375 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.66e-7■■□□□ 14.4
MATR3P43243 SETD5-201ENST00000302463 4786 ntTSL 1 (best) BASIC11.05□□□□□ -0.645e-7■■□□□ 14.4
MATR3P43243 PEX3-202ENST00000367592 784 ntTSL 510.89□□□□□ -0.675e-7■■□□□ 14.4
MATR3P43243 RAB21-201ENST00000261263 15546 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.695e-7■■□□□ 14.4
MATR3P43243 SIRT5-202ENST00000379250 3727 ntTSL 1 (best)10.69□□□□□ -0.72e-6■■□□□ 14.4
MATR3P43243 SIRT5-201ENST00000359782 3797 ntTSL 2 BASIC10.47□□□□□ -0.732e-6■■□□□ 14.4
MATR3P43243 PPARA-210ENST00000493286 1564 ntTSL 1 (best)10.45□□□□□ -0.745e-7■■□□□ 14.4
MATR3P43243 ARID4A-201ENST00000348476 5562 ntTSL 5 BASIC10.45□□□□□ -0.744e-6■■□□□ 14.4
MATR3P43243 ELOVL2-201ENST00000354666 3997 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.785e-7■■□□□ 14.4
MATR3P43243 SETD5-208ENST00000421188 1323 ntTSL 510.19□□□□□ -0.785e-7■■□□□ 14.4
MATR3P43243 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC10.17□□□□□ -0.785e-7■■□□□ 14.4
MATR3P43243 PPARA-209ENST00000484619 278 ntTSL 1 (best)9.96□□□□□ -0.825e-7■■□□□ 14.4
MATR3P43243 PHIP-201ENST00000275034 10460 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.855e-7■■□□□ 14.4
MATR3P43243 SIRT5-205ENST00000606117 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.892e-6■■□□□ 14.4
MATR3P43243 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC9.4□□□□□ -0.95e-7■■□□□ 14.4
MATR3P43243 RC3H1-203ENST00000367696 11261 ntAPPRIS P3 TSL 5 BASIC9.38□□□□□ -0.915e-7■■□□□ 14.4
MATR3P43243 PPARA-203ENST00000407236 9995 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.945e-7■■□□□ 14.4
MATR3P43243 SAMD4A-211ENST00000557013 3637 ntTSL 1 (best)9.13□□□□□ -0.955e-7■■□□□ 14.4
MATR3P43243 PPARA-201ENST00000262735 9965 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.985e-7■■□□□ 14.4
MATR3P43243 FBXO34-206ENST00000557647 434 ntTSL 38.88□□□□□ -0.995e-7■■□□□ 14.4
MATR3P43243 DCAF5-208ENST00000556847 2791 ntTSL 5 BASIC8.84□□□□□ -0.995e-7■■□□□ 14.4
MATR3P43243 SETD5-206ENST00000413704 3428 ntTSL 28.23□□□□□ -1.095e-7■■□□□ 14.4
MATR3P43243 SETD5-225ENST00000488236 1320 ntTSL 58.12□□□□□ -1.115e-7■■□□□ 14.4
MATR3P43243 SETD5-202ENST00000399686 3362 ntTSL 58.01□□□□□ -1.135e-7■■□□□ 14.4
MATR3P43243 SETD5-228ENST00000493918 4861 ntTSL 1 (best)7.89□□□□□ -1.155e-7■■□□□ 14.4
MATR3P43243 SETD5-217ENST00000466242 4038 ntTSL 27.18□□□□□ -1.265e-7■■□□□ 14.4
MATR3P43243 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC7.09□□□□□ -1.274e-6■■□□□ 14.4
MATR3P43243 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.394e-8■■□□□ 14.4
MATR3P43243 SETD5-220ENST00000476740 584 ntTSL 36.16□□□□□ -1.425e-7■■□□□ 14.4
MATR3P43243 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.455e-7■■□□□ 14.4
MATR3P43243 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.95□□□□□ -1.464e-8■■□□□ 14.4
MATR3P43243 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.525e-7■■□□□ 14.4
MATR3P43243 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.56□□□□□ -1.525e-7■■□□□ 14.4
MATR3P43243 TRIM25-208ENST00000574234 471 ntTSL 25.31□□□□□ -1.565e-7■■□□□ 14.4
MATR3P43243 RNF220-207ENST00000470498 594 ntTSL 35.11□□□□□ -1.592e-8■■□□□ 14.4
MATR3P43243 ARID4A-204ENST00000417477 2537 ntTSL 1 (best)4.54□□□□□ -1.684e-6■■□□□ 14.4
MATR3P43243 STRN-203ENST00000495595 1026 ntTSL 1 (best)4.34□□□□□ -1.715e-7■■□□□ 14.4
MATR3P43243 SIRT5-206ENST00000606427 571 ntTSL 43.63□□□□□ -1.832e-6■■□□□ 14.4
MATR3P43243 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.855e-7■■□□□ 14.4
MATR3P43243 SETD5-222ENST00000478961 672 ntTSL 22.07□□□□□ -2.085e-7■■□□□ 14.4
MATR3P43243 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.772e-7■■□□□ 14.4
MATR3P43243 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC30.29■■■□□ 2.442e-7■■□□□ 14.4
MATR3P43243 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC29.95■■■□□ 2.392e-7■■□□□ 14.4
MATR3P43243 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC29.2■■■□□ 2.272e-7■■□□□ 14.4
MATR3P43243 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC28.25■■■□□ 2.112e-7■■□□□ 14.4
MATR3P43243 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.12e-7■■□□□ 14.4
MATR3P43243 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC25.87■■□□□ 1.732e-7■■□□□ 14.4
MATR3P43243 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.94■□□□□ 0.32e-7■■□□□ 14.4
MATR3P43243 HOXB3-206ENST00000471459 565 ntTSL 416.35■□□□□ 0.212e-7■■□□□ 14.4
MATR3P43243 GNGT1-205ENST00000455502 1943 ntTSL 2 BASIC10.46□□□□□ -0.732e-7■■□□□ 14.4
MATR3P43243 AL713998.1-201ENST00000412872 1605 ntTSL 1 (best) BASIC12.15□□□□□ -0.465e-20■■□□□ 14.4
MATR3P43243 KANSL1-225ENST00000639356 1717 ntTSL 519.79■□□□□ 0.766e-7■■□□□ 14.4
MATR3P43243 KANSL1-209ENST00000574655 1681 ntTSL 517.76■□□□□ 0.436e-7■■□□□ 14.4
MATR3P43243 KANSL1-222ENST00000639099 1724 ntTSL 517.3■□□□□ 0.366e-7■■□□□ 14.4
MATR3P43243 PDE3B-203ENST00000525439 693 ntTSL 32.67□□□□□ -1.982e-6■■□□□ 14.4
MATR3P43243 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.255e-7■■□□□ 14.4
MATR3P43243 AC023509.3-202ENST00000591834 1609 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.165e-7■■□□□ 14.4
MATR3P43243 ATF7-202ENST00000456903 5218 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.595e-7■■□□□ 14.4
MATR3P43243 ATF7-201ENST00000420353 6680 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.645e-7■■□□□ 14.4
MATR3P43243 ATF7-207ENST00000551087 576 ntTSL 48.99□□□□□ -0.975e-7■■□□□ 14.4
MATR3P43243 SCFD1-213ENST00000554776 583 ntTSL 53.08□□□□□ -1.922e-6■■□□□ 14.4
MATR3P43243 TCF7L2-202ENST00000346198 667 ntTSL 37.45□□□□□ -1.222e-6■■□□□ 14.3
MATR3P43243 PPFIA1-225ENST00000638133 814 ntTSL 316.36■□□□□ 0.213e-7■■□□□ 14.3
MATR3P43243 PPFIA1-219ENST00000531657 3036 ntTSL 210.76□□□□□ -0.693e-7■■□□□ 14.3
MATR3P43243 PPFIA1-206ENST00000526262 4537 ntTSL 1 (best)9.96□□□□□ -0.813e-7■■□□□ 14.3
MATR3P43243 PPFIA1-215ENST00000530548 3774 ntTSL 28.75□□□□□ -1.013e-7■■□□□ 14.3
MATR3P43243 PPFIA1-204ENST00000525922 358 ntTSL 38.56□□□□□ -1.043e-7■■□□□ 14.3
MATR3P43243 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.083e-8■■□□□ 14.3
MATR3P43243 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC7.35□□□□□ -1.233e-8■■□□□ 14.3
MATR3P43243 OGT-210ENST00000488174 7243 ntTSL 57.13□□□□□ -1.273e-8■■□□□ 14.3
MATR3P43243 OGT-208ENST00000472270 689 ntTSL 27.09□□□□□ -1.273e-8■■□□□ 14.3
MATR3P43243 OGT-211ENST00000498566 601 ntTSL 34.5□□□□□ -1.693e-8■■□□□ 14.3
MATR3P43243 LTN1-203ENST00000389195 2714 ntTSL 1 (best) BASIC11.08□□□□□ -0.645e-9■■□□□ 14.3
MATR3P43243 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC6.06□□□□□ -1.445e-9■■□□□ 14.3
MATR3P43243 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.82□□□□□ -1.485e-9■■□□□ 14.3
MATR3P43243 REV1-209ENST00000473819 1352 ntTSL 24.43□□□□□ -1.75e-9■■□□□ 14.3
MATR3P43243 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.42□□□□□ -1.75e-9■■□□□ 14.3
MATR3P43243 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.915e-9■■□□□ 14.3
MATR3P43243 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.788e-7■■□□□ 14.3
MATR3P43243 CRIM1-203ENST00000426856 667 ntTSL 316.56■□□□□ 0.248e-7■■□□□ 14.3
MATR3P43243 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.226e-7■■□□□ 14.3
MATR3P43243 RHEB-205ENST00000478470 1153 ntTSL 527.3■■□□□ 1.966e-7■■□□□ 14.3
MATR3P43243 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.956e-7■■□□□ 14.3
MATR3P43243 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC26.05■■□□□ 1.766e-7■■□□□ 14.3
MATR3P43243 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC25.91■■□□□ 1.746e-7■■□□□ 14.3
MATR3P43243 RHEB-204ENST00000472642 900 ntTSL 3 BASIC22.27■■□□□ 1.166e-7■■□□□ 14.3
MATR3P43243 SSX2IP-207ENST00000481102 2457 ntTSL 521.76■■□□□ 1.076e-7■■□□□ 14.3
MATR3P43243 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.835e-6■■□□□ 14.3
Retrieved 100 of 16,209 protein–RNA pairs in 76.6 ms