RNA–Protein interactions for RNA: ENST00000471459.1

HOXB3-206, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-206ENST00000471459 NISCHQ9Y2I1 1504 aa36.34■■■■□ 3.41
HOXB3-206ENST00000471459 CCDC180Q9P1Z9 1646 aa32.37■■■□□ 2.77
HOXB3-206ENST00000471459 ABCC9O60706 1549 aa32.12■■■□□ 2.73
HOXB3-206ENST00000471459 DCAF8L2P0C7V8 631 aa30.79■■■□□ 2.52
HOXB3-206ENST00000471459 RB1CC1Q8TDY2 1594 aa30.74■■■□□ 2.51
HOXB3-206ENST00000471459 NACADO15069 1562 aa30.62■■■□□ 2.49
HOXB3-206ENST00000471459 MYO15BQ96JP2 1530 aa30.31■■■□□ 2.44
HOXB3-206ENST00000471459 ZCCHC6Q5VYS8 1495 aaKnown RBP30.16■■■□□ 2.42
HOXB3-206ENST00000471459 PABPN1Q86U42 306 aaKnown RBP eCLIP30.05■■■□□ 2.4
HOXB3-206ENST00000471459 DCAF1Q9Y4B6 1507 aa30.04■■■□□ 2.4
HOXB3-206ENST00000471459 UNC13AQ9UPW8 1703 aa29.79■■■□□ 2.36
HOXB3-206ENST00000471459 DNAJC5BQ9UF47 199 aa29.78■■■□□ 2.36
HOXB3-206ENST00000471459 BICRAQ9NZM4 1560 aa29.69■■■□□ 2.34
HOXB3-206ENST00000471459 SCRIBQ14160 1630 aa29.55■■■□□ 2.32
HOXB3-206ENST00000471459 SHROOM4Q9ULL8 1493 aa29.47■■■□□ 2.31
HOXB3-206ENST00000471459 EIF4G1Q04637 1599 aaKnown RBP29.01■■■□□ 2.23
HOXB3-206ENST00000471459 CC2D2AQ9P2K1 1620 aa28.96■■■□□ 2.23
HOXB3-206ENST00000471459 CECR2Q9BXF3 1484 aa28.91■■■□□ 2.22
HOXB3-206ENST00000471459 NCAPD3P42695 1498 aa28.28■■■□□ 2.12
HOXB3-206ENST00000471459 ATAD2BQ9ULI0 1458 aa28.22■■■□□ 2.11
HOXB3-206ENST00000471459 BAZ1AQ9NRL2 1556 aaPredicted RBP28.22■■■□□ 2.11
HOXB3-206ENST00000471459 SMARCA4P51532 1647 aa28.21■■■□□ 2.11
HOXB3-206ENST00000471459 SMARCA2P51531 1590 aa28.19■■■□□ 2.1
HOXB3-206ENST00000471459 HMGXB3Q12766 1538 aa28.04■■■□□ 2.08
HOXB3-206ENST00000471459 BAZ1BQ9UIG0 1483 aaKnown RBP28.01■■■□□ 2.07
HOXB3-206ENST00000471459 MROH2BQ7Z745 1585 aa27.98■■■□□ 2.07
HOXB3-206ENST00000471459 PEG3Q9GZU2 1588 aa27.94■■■□□ 2.06
HOXB3-206ENST00000471459 ERCC6Q03468 1493 aa27.8■■■□□ 2.04
HOXB3-206ENST00000471459 NESP48681 1621 aa27.64■■■□□ 2.02
HOXB3-206ENST00000471459 WIZO95785 1651 aa27.62■■■□□ 2.01
HOXB3-206ENST00000471459 RSF1Q96T23 1441 aaPredicted RBP27.59■■■□□ 2.01
HOXB3-206ENST00000471459 CUX2O14529 1486 aa27.55■■■□□ 2
HOXB3-206ENST00000471459 LAMC3Q9Y6N6 1575 aa27.55■■■□□ 2
HOXB3-206ENST00000471459 PDS5BQ9NTI5 1447 aa27.5■■□□□ 1.99
HOXB3-206ENST00000471459 CADPSQ9ULU8 1353 aa27.49■■□□□ 1.99
HOXB3-206ENST00000471459 TOP2AP11388 1531 aaKnown RBP27.35■■□□□ 1.97
HOXB3-206ENST00000471459 KIF21AQ7Z4S6 1674 aa27.21■■□□□ 1.95
HOXB3-206ENST00000471459 THOC2Q8NI27 1593 aaKnown RBP27.2■■□□□ 1.94
HOXB3-206ENST00000471459 CFTRP13569 1480 aa27.19■■□□□ 1.94
HOXB3-206ENST00000471459 DNAJC5Q9H3Z4 198 aa27.19■■□□□ 1.94
HOXB3-206ENST00000471459 MRC2Q9UBG0 1479 aa27.15■■□□□ 1.94
HOXB3-206ENST00000471459 FANCD2Q9BXW9 1451 aa27.13■■□□□ 1.93
HOXB3-206ENST00000471459 CEP164Q9UPV0 1460 aa27.13■■□□□ 1.93
HOXB3-206ENST00000471459 CCDC88BA6NC98 1476 aa27.08■■□□□ 1.93
HOXB3-206ENST00000471459 WDR62O43379 1518 aa27■■□□□ 1.91
HOXB3-206ENST00000471459 SUPT5HO00267 1087 aaKnown RBP26.83■■□□□ 1.89
HOXB3-206ENST00000471459 URB2Q14146 1524 aaKnown RBP26.81■■□□□ 1.88
HOXB3-206ENST00000471459 PRDM2Q13029 1718 aa26.76■■□□□ 1.88
HOXB3-206ENST00000471459 ABCC8Q09428 1581 aa26.71■■□□□ 1.87
HOXB3-206ENST00000471459 TOPBP1Q92547 1522 aa26.62■■□□□ 1.85
HOXB3-206ENST00000471459 IFT140Q96RY7 1462 aa26.6■■□□□ 1.85
HOXB3-206ENST00000471459 DNMBPQ6XZF7 1577 aa26.54■■□□□ 1.84
HOXB3-206ENST00000471459 OSCARQ8IYS5 282 aa26.52■■□□□ 1.84
HOXB3-206ENST00000471459 ZNF608Q9ULD9 1512 aaPredicted RBP26.43■■□□□ 1.82
HOXB3-206ENST00000471459 POLA1P09884 1462 aaPredicted RBP26.37■■□□□ 1.81
HOXB3-206ENST00000471459 SOGA1O94964 1423 aa26.37■■□□□ 1.81
HOXB3-206ENST00000471459 AQRO60306 1485 aaKnown RBP eCLIP26.3■■□□□ 1.83e-7■■■■□ 23.1
HOXB3-206ENST00000471459 RAD54L2Q9Y4B4 1467 aa26.28■■□□□ 1.8
HOXB3-206ENST00000471459 TARBP1Q13395 1621 aaKnown RBP26.28■■□□□ 1.8
HOXB3-206ENST00000471459 FGD5Q6ZNL6 1462 aa26.27■■□□□ 1.8
HOXB3-206ENST00000471459 EIF4G3O43432 1585 aaKnown RBP26.25■■□□□ 1.79
HOXB3-206ENST00000471459 CUX1P39880 1505 aa26.25■■□□□ 1.79
HOXB3-206ENST00000471459 TDRD9Q8NDG6 1382 aaKnown RBP26.25■■□□□ 1.79
HOXB3-206ENST00000471459 FBLN2P98095 1184 aa26.23■■□□□ 1.79
HOXB3-206ENST00000471459 TRIM41Q8WV44 630 aa26.2■■□□□ 1.78
HOXB3-206ENST00000471459 WDR97A6NE52 1622 aa26.11■■□□□ 1.77
HOXB3-206ENST00000471459 CHMP7Q8WUX9 453 aaPredicted RBP26.09■■□□□ 1.77
HOXB3-206ENST00000471459 WRNQ14191 1432 aaPredicted RBP eCLIP26.07■■□□□ 1.76
HOXB3-206ENST00000471459 GRIN2BQ13224 1484 aa26.06■■□□□ 1.76
HOXB3-206ENST00000471459 SNAPC4Q5SXM2 1469 aa26.02■■□□□ 1.76
HOXB3-206ENST00000471459 GAPVD1Q14C86 1478 aa26.01■■□□□ 1.75
HOXB3-206ENST00000471459 ABCA10Q8WWZ4 1543 aa26■■□□□ 1.75
HOXB3-206ENST00000471459 MAGI1Q96QZ7 1491 aaPredicted RBP26■■□□□ 1.75
HOXB3-206ENST00000471459 TOP2BQ02880 1626 aa25.95■■□□□ 1.74
HOXB3-206ENST00000471459 CHD1O14646 1710 aa25.94■■□□□ 1.74
HOXB3-206ENST00000471459 SYNJ2O15056 1496 aa25.91■■□□□ 1.74
HOXB3-206ENST00000471459 BIVM-ERCC5R4GMW8 1640 aa25.9■■□□□ 1.74
HOXB3-206ENST00000471459 SYNJ1O43426 1573 aa25.89■■□□□ 1.73
HOXB3-206ENST00000471459 ARHGEF11O15085 1522 aa25.88■■□□□ 1.73
HOXB3-206ENST00000471459 RIMBP3CA6NJZ7 1639 aa25.87■■□□□ 1.73
HOXB3-206ENST00000471459 RIMBP3BA6NNM3 1639 aa25.87■■□□□ 1.73
HOXB3-206ENST00000471459 RIMBP3Q9UFD9 1639 aa25.87■■□□□ 1.73
HOXB3-206ENST00000471459 CYB5RLQ6IPT4 315 aa25.85■■□□□ 1.73
HOXB3-206ENST00000471459 ABCA5Q8WWZ7 1642 aa25.83■■□□□ 1.73
HOXB3-206ENST00000471459 PBRM1Q86U86 1689 aa25.8■■□□□ 1.72
HOXB3-206ENST00000471459 FHAD1B1AJZ9 1412 aa25.71■■□□□ 1.71
HOXB3-206ENST00000471459 CLASP1Q7Z460 1538 aa25.7■■□□□ 1.7
HOXB3-206ENST00000471459 ERICH3Q5RHP9 1530 aa25.69■■□□□ 1.7
HOXB3-206ENST00000471459 GRIN2AQ12879 1464 aa25.67■■□□□ 1.7
HOXB3-206ENST00000471459 ARAP1Q96P48 1450 aa25.63■■□□□ 1.69
HOXB3-206ENST00000471459 ADAMTS12P58397 1594 aa25.62■■□□□ 1.69
HOXB3-206ENST00000471459 KIF27Q86VH2 1401 aa25.6■■□□□ 1.69
HOXB3-206ENST00000471459 NUP160Q12769 1436 aa25.56■■□□□ 1.68
HOXB3-206ENST00000471459 IGF1RP08069 1367 aa25.51■■□□□ 1.67
HOXB3-206ENST00000471459 TRHP20396 242 aaPredicted RBP25.5■■□□□ 1.67
HOXB3-206ENST00000471459 CEP170Q5SW79 1584 aa25.48■■□□□ 1.67
HOXB3-206ENST00000471459 JPH4Q96JJ6 628 aa25.46■■□□□ 1.67
HOXB3-206ENST00000471459 CARMIL1Q5VZK9 1371 aa25.39■■□□□ 1.65
HOXB3-206ENST00000471459 PRG4Q92954 1404 aaPredicted RBP25.37■■□□□ 1.65
HOXB3-206ENST00000471459 CUL7Q14999 1698 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms