RNA–Protein interactions for RNA: ENST00000493286.1

PPARA-210, Transcript of peroxisome proliferator activated receptor alpha, humanhuman

TSL 1 (best)

Gene PPARA, Length 1,564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARA-210ENST00000493286 NISCHQ9Y2I1 1504 aa23.06■■□□□ 1.28
PPARA-210ENST00000493286 CCDC180Q9P1Z9 1646 aa20.48■□□□□ 0.87
PPARA-210ENST00000493286 ABCC9O60706 1549 aa19.84■□□□□ 0.77
PPARA-210ENST00000493286 AEBP2Q6ZN18 517 aaPredicted RBP19.56■□□□□ 0.72
PPARA-210ENST00000493286 ZCCHC6Q5VYS8 1495 aaKnown RBP19.24■□□□□ 0.67
PPARA-210ENST00000493286 NACADO15069 1562 aa19.23■□□□□ 0.67
PPARA-210ENST00000493286 RB1CC1Q8TDY2 1594 aa19.21■□□□□ 0.67
PPARA-210ENST00000493286 MYO15BQ96JP2 1530 aa19.21■□□□□ 0.67
PPARA-210ENST00000493286 DCAF1Q9Y4B6 1507 aa19.15■□□□□ 0.66
PPARA-210ENST00000493286 DCAF8L2P0C7V8 631 aa19.14■□□□□ 0.65
PPARA-210ENST00000493286 UNC13AQ9UPW8 1703 aa18.72■□□□□ 0.59
PPARA-210ENST00000493286 SCRIBQ14160 1630 aa18.62■□□□□ 0.57
PPARA-210ENST00000493286 BICRAQ9NZM4 1560 aa18.59■□□□□ 0.57
PPARA-210ENST00000493286 PABPN1Q86U42 306 aaKnown RBP eCLIP18.55■□□□□ 0.56
PPARA-210ENST00000493286 SHROOM4Q9ULL8 1493 aa18.52■□□□□ 0.56
PPARA-210ENST00000493286 CHIC1Q5VXU3 224 aa18.35■□□□□ 0.53
PPARA-210ENST00000493286 POTEDQ86YR6 584 aa18.19■□□□□ 0.5
PPARA-210ENST00000493286 EIF4G1Q04637 1599 aaKnown RBP18.11■□□□□ 0.49
PPARA-210ENST00000493286 DNAJC5BQ9UF47 199 aa18.08■□□□□ 0.48
PPARA-210ENST00000493286 CC2D2AQ9P2K1 1620 aa17.98■□□□□ 0.47
PPARA-210ENST00000493286 CECR2Q9BXF3 1484 aa17.9■□□□□ 0.46
PPARA-210ENST00000493286 BAZ1AQ9NRL2 1556 aaPredicted RBP17.88■□□□□ 0.45
PPARA-210ENST00000493286 SMARCA4P51532 1647 aa17.86■□□□□ 0.45
PPARA-210ENST00000493286 SMARCA2P51531 1590 aa17.75■□□□□ 0.43
PPARA-210ENST00000493286 NCAPD3P42695 1498 aa17.74■□□□□ 0.43
PPARA-210ENST00000493286 ATAD2BQ9ULI0 1458 aa17.74■□□□□ 0.43
PPARA-210ENST00000493286 MROH2BQ7Z745 1585 aa17.73■□□□□ 0.43
PPARA-210ENST00000493286 PEG3Q9GZU2 1588 aa17.73■□□□□ 0.43
PPARA-210ENST00000493286 HMGXB3Q12766 1538 aa17.67■□□□□ 0.42
PPARA-210ENST00000493286 BAZ1BQ9UIG0 1483 aaKnown RBP17.61■□□□□ 0.41
PPARA-210ENST00000493286 RSF1Q96T23 1441 aaPredicted RBP17.59■□□□□ 0.41
PPARA-210ENST00000493286 WIZO95785 1651 aa17.53■□□□□ 0.4
PPARA-210ENST00000493286 TOP2AP11388 1531 aaKnown RBP17.41■□□□□ 0.38
PPARA-210ENST00000493286 LAMC3Q9Y6N6 1575 aa17.26■□□□□ 0.35
PPARA-210ENST00000493286 CADPSQ9ULU8 1353 aa17.21■□□□□ 0.35
PPARA-210ENST00000493286 NESP48681 1621 aa17.2■□□□□ 0.34
PPARA-210ENST00000493286 CCDC88BA6NC98 1476 aa17.17■□□□□ 0.34
PPARA-210ENST00000493286 SUPT5HO00267 1087 aaKnown RBP17.16■□□□□ 0.34
PPARA-210ENST00000493286 PDS5BQ9NTI5 1447 aa17.14■□□□□ 0.34
PPARA-210ENST00000493286 CFTRP13569 1480 aa17.14■□□□□ 0.34
PPARA-210ENST00000493286 ERCC6Q03468 1493 aa17.14■□□□□ 0.33
PPARA-210ENST00000493286 SENP3Q9H4L4 574 aaPredicted RBP17.07■□□□□ 0.32
PPARA-210ENST00000493286 PRDM2Q13029 1718 aa17.02■□□□□ 0.31
PPARA-210ENST00000493286 KIF21AQ7Z4S6 1674 aa17.01■□□□□ 0.31
PPARA-210ENST00000493286 FANCD2Q9BXW9 1451 aa17■□□□□ 0.31
PPARA-210ENST00000493286 CEP164Q9UPV0 1460 aa16.98■□□□□ 0.31
PPARA-210ENST00000493286 CUX2O14529 1486 aa16.96■□□□□ 0.31
PPARA-210ENST00000493286 THOC2Q8NI27 1593 aaKnown RBP16.96■□□□□ 0.31
PPARA-210ENST00000493286 MRC2Q9UBG0 1479 aa16.93■□□□□ 0.3
PPARA-210ENST00000493286 WDR62O43379 1518 aa16.88■□□□□ 0.29
PPARA-210ENST00000493286 ABCC8Q09428 1581 aa16.81■□□□□ 0.28
PPARA-210ENST00000493286 URB2Q14146 1524 aaKnown RBP16.81■□□□□ 0.28
PPARA-210ENST00000493286 DNMBPQ6XZF7 1577 aa16.74■□□□□ 0.27
PPARA-210ENST00000493286 TOPBP1Q92547 1522 aa16.74■□□□□ 0.27
PPARA-210ENST00000493286 IFT140Q96RY7 1462 aa16.64■□□□□ 0.25
PPARA-210ENST00000493286 CUX1P39880 1505 aa16.64■□□□□ 0.25
PPARA-210ENST00000493286 POLA1P09884 1462 aaPredicted RBP16.61■□□□□ 0.25
PPARA-210ENST00000493286 WRNQ14191 1432 aaPredicted RBP eCLIP16.6■□□□□ 0.25
PPARA-210ENST00000493286 FGD5Q6ZNL6 1462 aa16.57■□□□□ 0.24
PPARA-210ENST00000493286 TOP2BQ02880 1626 aa16.56■□□□□ 0.24
PPARA-210ENST00000493286 BIVM-ERCC5R4GMW8 1640 aa16.55■□□□□ 0.24
PPARA-210ENST00000493286 TARBP1Q13395 1621 aaKnown RBP16.55■□□□□ 0.24
PPARA-210ENST00000493286 PHF23Q9BUL5 403 aaPredicted RBP16.54■□□□□ 0.24
PPARA-210ENST00000493286 SOGA1O94964 1423 aa16.54■□□□□ 0.24
PPARA-210ENST00000493286 SYNJ1O43426 1573 aa16.51■□□□□ 0.23
PPARA-210ENST00000493286 WDR97A6NE52 1622 aa16.51■□□□□ 0.23
PPARA-210ENST00000493286 RAD54L2Q9Y4B4 1467 aa16.49■□□□□ 0.23
PPARA-210ENST00000493286 ZNF608Q9ULD9 1512 aaPredicted RBP16.49■□□□□ 0.23
PPARA-210ENST00000493286 EIF4G3O43432 1585 aaKnown RBP16.46■□□□□ 0.22
PPARA-210ENST00000493286 ABCA10Q8WWZ4 1543 aa16.45■□□□□ 0.22
PPARA-210ENST00000493286 AQRO60306 1485 aaKnown RBP eCLIP16.42■□□□□ 0.22
PPARA-210ENST00000493286 TDRD9Q8NDG6 1382 aaKnown RBP16.4■□□□□ 0.22
PPARA-210ENST00000493286 GAPVD1Q14C86 1478 aa16.36■□□□□ 0.21
PPARA-210ENST00000493286 ABCA5Q8WWZ7 1642 aa16.36■□□□□ 0.21
PPARA-210ENST00000493286 GRIN2BQ13224 1484 aa16.35■□□□□ 0.21
PPARA-210ENST00000493286 MAGI1Q96QZ7 1491 aaPredicted RBP16.32■□□□□ 0.2
PPARA-210ENST00000493286 PBRM1Q86U86 1689 aa16.3■□□□□ 0.2
PPARA-210ENST00000493286 SNAPC4Q5SXM2 1469 aa16.28■□□□□ 0.2
PPARA-210ENST00000493286 ERICH3Q5RHP9 1530 aa16.26■□□□□ 0.19
PPARA-210ENST00000493286 DNAJC5Q9H3Z4 198 aa16.26■□□□□ 0.19
PPARA-210ENST00000493286 KIF27Q86VH2 1401 aa16.26■□□□□ 0.19
PPARA-210ENST00000493286 TRIM41Q8WV44 630 aa16.26■□□□□ 0.19
PPARA-210ENST00000493286 OSCARQ8IYS5 282 aa16.25■□□□□ 0.19
PPARA-210ENST00000493286 SYNJ2O15056 1496 aa16.23■□□□□ 0.19
PPARA-210ENST00000493286 CHD1O14646 1710 aa16.21■□□□□ 0.19
PPARA-210ENST00000493286 CHMP7Q8WUX9 453 aaPredicted RBP16.2■□□□□ 0.18
PPARA-210ENST00000493286 ADAMTS12P58397 1594 aa16.19■□□□□ 0.18
PPARA-210ENST00000493286 FHAD1B1AJZ9 1412 aa16.19■□□□□ 0.18
PPARA-210ENST00000493286 FBLN2P98095 1184 aa16.17■□□□□ 0.18
PPARA-210ENST00000493286 IGF1RP08069 1367 aa16.15■□□□□ 0.18
PPARA-210ENST00000493286 CUL7Q14999 1698 aa16.14■□□□□ 0.17
PPARA-210ENST00000493286 GRIN2AQ12879 1464 aa16.14■□□□□ 0.17
PPARA-210ENST00000493286 NUP160Q12769 1436 aa16.07■□□□□ 0.16
PPARA-210ENST00000493286 CARMIL1Q5VZK9 1371 aa16.07■□□□□ 0.16
PPARA-210ENST00000493286 CLASP1Q7Z460 1538 aa16.07■□□□□ 0.16
PPARA-210ENST00000493286 EEA1Q15075 1411 aa16.06■□□□□ 0.16
PPARA-210ENST00000493286 RUSC2Q8N2Y8 1516 aa16.05■□□□□ 0.16
PPARA-210ENST00000493286 FOXD1Q16676 465 aa16.03■□□□□ 0.16
PPARA-210ENST00000493286 CEP170Q5SW79 1584 aa16.02■□□□□ 0.16
PPARA-210ENST00000493286 RAPGEF2Q9Y4G8 1499 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms