RNA–Protein interactions for RNA: ENST00000348476.7

ARID4A-201, Transcript of AT-rich interaction domain 4A, humanhuman

TSL 5 BASIC

Gene ARID4A, Length 5,562 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID4A-201ENST00000348476 NISCHQ9Y2I1 1504 aa19.47■□□□□ 0.71
ARID4A-201ENST00000348476 DCAF8L2P0C7V8 631 aa17.24■□□□□ 0.35
ARID4A-201ENST00000348476 CCDC180Q9P1Z9 1646 aa16.86■□□□□ 0.29
ARID4A-201ENST00000348476 ABCC9O60706 1549 aa16.62■□□□□ 0.25
ARID4A-201ENST00000348476 SHROOM4Q9ULL8 1493 aa16.51■□□□□ 0.23
ARID4A-201ENST00000348476 ZCCHC6Q5VYS8 1495 aaKnown RBP16.25■□□□□ 0.19
ARID4A-201ENST00000348476 SUPT5HO00267 1087 aaKnown RBP15.98■□□□□ 0.15
ARID4A-201ENST00000348476 RB1CC1Q8TDY2 1594 aa15.95■□□□□ 0.14
ARID4A-201ENST00000348476 NACADO15069 1562 aa15.93■□□□□ 0.14
ARID4A-201ENST00000348476 SCRIBQ14160 1630 aa15.89■□□□□ 0.13
ARID4A-201ENST00000348476 DCAF1Q9Y4B6 1507 aa15.87■□□□□ 0.13
ARID4A-201ENST00000348476 PABPN1Q86U42 306 aaKnown RBP eCLIP15.85■□□□□ 0.13
ARID4A-201ENST00000348476 MYO15BQ96JP2 1530 aa15.69■□□□□ 0.1
ARID4A-201ENST00000348476 CECR2Q9BXF3 1484 aa15.19■□□□□ 0.02
ARID4A-201ENST00000348476 BAZ1AQ9NRL2 1556 aaPredicted RBP15.14■□□□□ 0.01
ARID4A-201ENST00000348476 UNC13AQ9UPW8 1703 aa15.14■□□□□ 0.01
ARID4A-201ENST00000348476 RSF1Q96T23 1441 aaPredicted RBP15.13■□□□□ 0.01
ARID4A-201ENST00000348476 BICRAQ9NZM4 1560 aa15.06■□□□□ 0
ARID4A-201ENST00000348476 MROH2BQ7Z745 1585 aa15.06■□□□□ 0
ARID4A-201ENST00000348476 BAZ1BQ9UIG0 1483 aaKnown RBP14.99□□□□□ -0.01
ARID4A-201ENST00000348476 SMARCA4P51532 1647 aa14.99□□□□□ -0.01
ARID4A-201ENST00000348476 TRIM41Q8WV44 630 aa14.98□□□□□ -0.01
ARID4A-201ENST00000348476 WIZO95785 1651 aa14.93□□□□□ -0.02
ARID4A-201ENST00000348476 SMARCA2P51531 1590 aa14.92□□□□□ -0.02
ARID4A-201ENST00000348476 PELP1Q8IZL8 1130 aaKnown RBP14.9□□□□□ -0.02
ARID4A-201ENST00000348476 EIF4G1Q04637 1599 aaKnown RBP14.89□□□□□ -0.03
ARID4A-201ENST00000348476 EHMT2Q96KQ7 1210 aa14.89□□□□□ -0.03
ARID4A-201ENST00000348476 FAM9AQ8IZU1 332 aaPredicted RBP14.87□□□□□ -0.03
ARID4A-201ENST00000348476 ATAD2BQ9ULI0 1458 aa14.84□□□□□ -0.03
ARID4A-201ENST00000348476 TOP2AP11388 1531 aaKnown RBP14.8□□□□□ -0.04
ARID4A-201ENST00000348476 MYT1Q01538 1121 aa14.79□□□□□ -0.04
ARID4A-201ENST00000348476 CHIC1Q5VXU3 224 aa14.78□□□□□ -0.04
ARID4A-201ENST00000348476 CC2D2AQ9P2K1 1620 aa14.75□□□□□ -0.05
ARID4A-201ENST00000348476 CCDC88BA6NC98 1476 aa14.72□□□□□ -0.05
ARID4A-201ENST00000348476 NCAPD3P42695 1498 aa14.67□□□□□ -0.06
ARID4A-201ENST00000348476 HMGXB3Q12766 1538 aa14.59□□□□□ -0.07
ARID4A-201ENST00000348476 DNAJC5BQ9UF47 199 aa14.54□□□□□ -0.08
ARID4A-201ENST00000348476 PEG3Q9GZU2 1588 aa14.54□□□□□ -0.08
ARID4A-201ENST00000348476 RANGAP1P46060 587 aaPredicted RBP14.53□□□□□ -0.08
ARID4A-201ENST00000348476 UBTFP17480 764 aaKnown RBP14.52□□□□□ -0.08
ARID4A-201ENST00000348476 ERCC6Q03468 1493 aa14.52□□□□□ -0.09
ARID4A-201ENST00000348476 APLP2Q06481 763 aa14.52□□□□□ -0.09
ARID4A-201ENST00000348476 CADPSQ9ULU8 1353 aa14.51□□□□□ -0.09
ARID4A-201ENST00000348476 WRNQ14191 1432 aaPredicted RBP eCLIP14.47□□□□□ -0.09
ARID4A-201ENST00000348476 PDS5BQ9NTI5 1447 aa14.45□□□□□ -0.1
ARID4A-201ENST00000348476 ABCC8Q09428 1581 aa14.42□□□□□ -0.1
ARID4A-201ENST00000348476 LOC105371045A0A1W2PR82 267 aa14.4□□□□□ -0.1
ARID4A-201ENST00000348476 FANCD2Q9BXW9 1451 aa14.37□□□□□ -0.11
ARID4A-201ENST00000348476 CEP164Q9UPV0 1460 aa14.36□□□□□ -0.11
ARID4A-201ENST00000348476 NESP48681 1621 aa14.35□□□□□ -0.11
ARID4A-201ENST00000348476 CFTRP13569 1480 aa14.33□□□□□ -0.12
ARID4A-201ENST00000348476 CSRNP3Q8WYN3 585 aa14.31□□□□□ -0.12
ARID4A-201ENST00000348476 FBLN2P98095 1184 aa14.3□□□□□ -0.12
ARID4A-201ENST00000348476 ATP1B4Q9UN42 357 aaPredicted RBP14.28□□□□□ -0.12
ARID4A-201ENST00000348476 LAMC3Q9Y6N6 1575 aa14.24□□□□□ -0.13
ARID4A-201ENST00000348476 TTBK1Q5TCY1 1321 aaPredicted RBP14.22□□□□□ -0.13
ARID4A-201ENST00000348476 KIF27Q86VH2 1401 aa14.21□□□□□ -0.14
ARID4A-201ENST00000348476 SOGA1O94964 1423 aa14.19□□□□□ -0.14
ARID4A-201ENST00000348476 CUX2O14529 1486 aa14.18□□□□□ -0.14
ARID4A-201ENST00000348476 EEA1Q15075 1411 aa14.17□□□□□ -0.14
ARID4A-201ENST00000348476 MRC2Q9UBG0 1479 aa14.14□□□□□ -0.15
ARID4A-201ENST00000348476 FGD5Q6ZNL6 1462 aa14.13□□□□□ -0.15
ARID4A-201ENST00000348476 SYNJ1O43426 1573 aa14.12□□□□□ -0.15
ARID4A-201ENST00000348476 CHMP7Q8WUX9 453 aaPredicted RBP14.11□□□□□ -0.15
ARID4A-201ENST00000348476 TDRD9Q8NDG6 1382 aaKnown RBP14.1□□□□□ -0.15
ARID4A-201ENST00000348476 CUX1P39880 1505 aa14.1□□□□□ -0.15
ARID4A-201ENST00000348476 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.08□□□□□ -0.16
ARID4A-201ENST00000348476 HNRNPUL2Q1KMD3 747 aaKnown RBP14.08□□□□□ -0.16
ARID4A-201ENST00000348476 RAD54L2Q9Y4B4 1467 aa14.08□□□□□ -0.16
ARID4A-201ENST00000348476 TOPBP1Q92547 1522 aa14.07□□□□□ -0.16
ARID4A-201ENST00000348476 TOP2BQ02880 1626 aa14.07□□□□□ -0.16
ARID4A-201ENST00000348476 DNMBPQ6XZF7 1577 aa14.06□□□□□ -0.16
ARID4A-201ENST00000348476 GOLGA3Q08378 1498 aa14.05□□□□□ -0.16
ARID4A-201ENST00000348476 PPARGC1BQ86YN6 1023 aaKnown RBP14.04□□□□□ -0.16
ARID4A-201ENST00000348476 P3H3Q8IVL6 736 aa14.04□□□□□ -0.16
ARID4A-201ENST00000348476 CARMIL1Q5VZK9 1371 aa14.02□□□□□ -0.17
ARID4A-201ENST00000348476 RUSC2Q8N2Y8 1516 aa14.01□□□□□ -0.17
ARID4A-201ENST00000348476 PRDM2Q13029 1718 aa14.01□□□□□ -0.17
ARID4A-201ENST00000348476 KIF21AQ7Z4S6 1674 aa14.01□□□□□ -0.17
ARID4A-201ENST00000348476 URB2Q14146 1524 aaKnown RBP13.99□□□□□ -0.17
ARID4A-201ENST00000348476 POLA1P09884 1462 aaPredicted RBP13.99□□□□□ -0.17
ARID4A-201ENST00000348476 GAPVD1Q14C86 1478 aa13.95□□□□□ -0.18
ARID4A-201ENST00000348476 IFT140Q96RY7 1462 aa13.95□□□□□ -0.18
ARID4A-201ENST00000348476 BIVM-ERCC5R4GMW8 1640 aa13.94□□□□□ -0.18
ARID4A-201ENST00000348476 AQRO60306 1485 aaKnown RBP eCLIP13.94□□□□□ -0.183e-6■■■■□ 24.7
ARID4A-201ENST00000348476 TNIKQ9UKE5 1360 aa13.91□□□□□ -0.18
ARID4A-201ENST00000348476 CLIP1P30622 1438 aa13.9□□□□□ -0.18
ARID4A-201ENST00000348476 RAPGEF2Q9Y4G8 1499 aa13.9□□□□□ -0.18
ARID4A-201ENST00000348476 MYT1LQ9UL68 1186 aa13.89□□□□□ -0.19
ARID4A-201ENST00000348476 CEP162Q5TB80 1403 aa13.89□□□□□ -0.19
ARID4A-201ENST00000348476 IGF1RP08069 1367 aa13.88□□□□□ -0.19
ARID4A-201ENST00000348476 ARID3CA6NKF2 412 aa13.87□□□□□ -0.19
ARID4A-201ENST00000348476 PCGF6Q9BYE7 350 aa13.87□□□□□ -0.19
ARID4A-201ENST00000348476 ABCA10Q8WWZ4 1543 aa13.86□□□□□ -0.19
ARID4A-201ENST00000348476 GRIN2BQ13224 1484 aa13.85□□□□□ -0.19
ARID4A-201ENST00000348476 WDR62O43379 1518 aa13.82□□□□□ -0.2
ARID4A-201ENST00000348476 SNAPC4Q5SXM2 1469 aa13.78□□□□□ -0.2
ARID4A-201ENST00000348476 FHAD1B1AJZ9 1412 aa13.78□□□□□ -0.2
ARID4A-201ENST00000348476 ERICH6Q7L0X2 663 aa13.77□□□□□ -0.2
ARID4A-201ENST00000348476 ZNF608Q9ULD9 1512 aaPredicted RBP13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms