RNA–Protein interactions for RNA: ENST00000557013.1

SAMD4A-211, Transcript of sterile alpha motif domain containing 4A, humanhuman

TSL 1 (best)

Gene SAMD4A, Length 3,637 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4A-211ENST00000557013 NISCHQ9Y2I1 1504 aa15.97■□□□□ 0.15
SAMD4A-211ENST00000557013 CCDC180Q9P1Z9 1646 aa14.14□□□□□ -0.15
SAMD4A-211ENST00000557013 ABCC9O60706 1549 aa14.09□□□□□ -0.15
SAMD4A-211ENST00000557013 PELP1Q8IZL8 1130 aaKnown RBP14.01□□□□□ -0.17
SAMD4A-211ENST00000557013 DCAF8L2P0C7V8 631 aa13.96□□□□□ -0.17
SAMD4A-211ENST00000557013 SHROOM4Q9ULL8 1493 aa13.67□□□□□ -0.22
SAMD4A-211ENST00000557013 MYT1Q01538 1121 aa13.62□□□□□ -0.23
SAMD4A-211ENST00000557013 HRCP23327 699 aa13.59□□□□□ -0.23
SAMD4A-211ENST00000557013 SUPT5HO00267 1087 aaKnown RBP13.58□□□□□ -0.23
SAMD4A-211ENST00000557013 PPARGC1BQ86YN6 1023 aaKnown RBP13.54□□□□□ -0.24
SAMD4A-211ENST00000557013 RB1CC1Q8TDY2 1594 aa13.39□□□□□ -0.27
SAMD4A-211ENST00000557013 PCGF6Q9BYE7 350 aa13.34□□□□□ -0.27
SAMD4A-211ENST00000557013 NACADO15069 1562 aa13.32□□□□□ -0.28
SAMD4A-211ENST00000557013 ZCCHC6Q5VYS8 1495 aaKnown RBP13.29□□□□□ -0.28
SAMD4A-211ENST00000557013 SCAF1Q9H7N4 1312 aaKnown RBP13.25□□□□□ -0.29
SAMD4A-211ENST00000557013 PABPN1Q86U42 306 aaKnown RBP eCLIP13.21□□□□□ -0.29
SAMD4A-211ENST00000557013 CHIC1Q5VXU3 224 aa13.19□□□□□ -0.3
SAMD4A-211ENST00000557013 MYO15BQ96JP2 1530 aa13.13□□□□□ -0.31
SAMD4A-211ENST00000557013 UNC13AQ9UPW8 1703 aa13.12□□□□□ -0.31
SAMD4A-211ENST00000557013 DCAF1Q9Y4B6 1507 aa13.09□□□□□ -0.31
SAMD4A-211ENST00000557013 SCRIBQ14160 1630 aa13.08□□□□□ -0.32
SAMD4A-211ENST00000557013 BICRAQ9NZM4 1560 aa12.99□□□□□ -0.33
SAMD4A-211ENST00000557013 DNAJC5BQ9UF47 199 aa12.95□□□□□ -0.34
SAMD4A-211ENST00000557013 LOC105371045A0A1W2PR82 267 aa12.92□□□□□ -0.34
SAMD4A-211ENST00000557013 GTF3C3Q9Y5Q9 886 aa12.84□□□□□ -0.35
SAMD4A-211ENST00000557013 BCL11AQ9H165 835 aa12.82□□□□□ -0.36
SAMD4A-211ENST00000557013 TTBK1Q5TCY1 1321 aaPredicted RBP12.81□□□□□ -0.36
SAMD4A-211ENST00000557013 TRIM26Q12899 539 aaPredicted RBP12.79□□□□□ -0.36
SAMD4A-211ENST00000557013 ACIN1Q9UKV3 1341 aaKnown RBP12.75□□□□□ -0.37
SAMD4A-211ENST00000557013 NEUROD1Q13562 356 aa12.74□□□□□ -0.37
SAMD4A-211ENST00000557013 CENPBP07199 599 aaPredicted RBP12.74□□□□□ -0.37
SAMD4A-211ENST00000557013 PRKCSHP14314 528 aaPredicted RBP12.71□□□□□ -0.37
SAMD4A-211ENST00000557013 EIF4G1Q04637 1599 aaKnown RBP12.68□□□□□ -0.38
SAMD4A-211ENST00000557013 CC2D2AQ9P2K1 1620 aa12.66□□□□□ -0.38
SAMD4A-211ENST00000557013 FAM9AQ8IZU1 332 aaPredicted RBP12.66□□□□□ -0.38
SAMD4A-211ENST00000557013 ZEB1P37275 1124 aaPredicted RBP12.62□□□□□ -0.39
SAMD4A-211ENST00000557013 CECR2Q9BXF3 1484 aa12.6□□□□□ -0.39
SAMD4A-211ENST00000557013 EHMT2Q96KQ7 1210 aa12.58□□□□□ -0.4
SAMD4A-211ENST00000557013 TRIM41Q8WV44 630 aa12.56□□□□□ -0.4
SAMD4A-211ENST00000557013 YTHDC1Q96MU7 727 aaKnown RBP12.54□□□□□ -0.4
SAMD4A-211ENST00000557013 ERICH6Q7L0X2 663 aa12.44□□□□□ -0.42
SAMD4A-211ENST00000557013 SMARCA4P51532 1647 aa12.42□□□□□ -0.42
SAMD4A-211ENST00000557013 BAZ1AQ9NRL2 1556 aaPredicted RBP12.38□□□□□ -0.43
SAMD4A-211ENST00000557013 ANP32EQ9BTT0 268 aa12.37□□□□□ -0.43
SAMD4A-211ENST00000557013 MROH2BQ7Z745 1585 aa12.36□□□□□ -0.43
SAMD4A-211ENST00000557013 RSF1Q96T23 1441 aaPredicted RBP12.36□□□□□ -0.43
SAMD4A-211ENST00000557013 ATAD2BQ9ULI0 1458 aa12.36□□□□□ -0.43
SAMD4A-211ENST00000557013 DIEXFQ68CQ4 756 aaKnown RBP12.34□□□□□ -0.43
SAMD4A-211ENST00000557013 CSRNP3Q8WYN3 585 aa12.32□□□□□ -0.44
SAMD4A-211ENST00000557013 CCER1Q8TC90 406 aaPredicted RBP12.32□□□□□ -0.44
SAMD4A-211ENST00000557013 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.31□□□□□ -0.44
SAMD4A-211ENST00000557013 SMARCA2P51531 1590 aa12.31□□□□□ -0.44
SAMD4A-211ENST00000557013 NCAPD3P42695 1498 aa12.3□□□□□ -0.44
SAMD4A-211ENST00000557013 BAZ1BQ9UIG0 1483 aaKnown RBP12.3□□□□□ -0.44
SAMD4A-211ENST00000557013 WIZO95785 1651 aa12.25□□□□□ -0.45
SAMD4A-211ENST00000557013 HMGXB3Q12766 1538 aa12.23□□□□□ -0.45
SAMD4A-211ENST00000557013 PEG3Q9GZU2 1588 aa12.19□□□□□ -0.46
SAMD4A-211ENST00000557013 NESP48681 1621 aa12.17□□□□□ -0.46
SAMD4A-211ENST00000557013 ERCC6Q03468 1493 aa12.14□□□□□ -0.47
SAMD4A-211ENST00000557013 APLP2Q06481 763 aa12.05□□□□□ -0.48
SAMD4A-211ENST00000557013 TOP2AP11388 1531 aaKnown RBP12.04□□□□□ -0.48
SAMD4A-211ENST00000557013 ANO8Q9HCE9 1232 aaPredicted RBP12.03□□□□□ -0.48
SAMD4A-211ENST00000557013 TSHZ2Q9NRE2 1034 aa12.01□□□□□ -0.49
SAMD4A-211ENST00000557013 CADPSQ9ULU8 1353 aa12□□□□□ -0.49
SAMD4A-211ENST00000557013 LAMC3Q9Y6N6 1575 aa12□□□□□ -0.49
SAMD4A-211ENST00000557013 BCANQ96GW7 911 aa11.99□□□□□ -0.49
SAMD4A-211ENST00000557013 ZNF316A6NFI3 1004 aaPredicted RBP11.98□□□□□ -0.49
SAMD4A-211ENST00000557013 UBTFP17480 764 aaKnown RBP11.98□□□□□ -0.49
SAMD4A-211ENST00000557013 KIF21AQ7Z4S6 1674 aa11.97□□□□□ -0.49
SAMD4A-211ENST00000557013 PDS5BQ9NTI5 1447 aa11.96□□□□□ -0.5
SAMD4A-211ENST00000557013 CCDC88BA6NC98 1476 aa11.95□□□□□ -0.5
SAMD4A-211ENST00000557013 CCDC136Q96JN2 1154 aa11.94□□□□□ -0.5
SAMD4A-211ENST00000557013 CEP162Q5TB80 1403 aa11.93□□□□□ -0.5
SAMD4A-211ENST00000557013 SUPT16HQ9Y5B9 1047 aaKnown RBP11.93□□□□□ -0.5
SAMD4A-211ENST00000557013 MIER1Q8N108 512 aa11.92□□□□□ -0.5
SAMD4A-211ENST00000557013 HNRNPUL2Q1KMD3 747 aaKnown RBP11.91□□□□□ -0.5
SAMD4A-211ENST00000557013 FANCD2Q9BXW9 1451 aa11.89□□□□□ -0.51
SAMD4A-211ENST00000557013 CFTRP13569 1480 aa11.89□□□□□ -0.51
SAMD4A-211ENST00000557013 WRNQ14191 1432 aaPredicted RBP eCLIP11.89□□□□□ -0.51
SAMD4A-211ENST00000557013 THOC2Q8NI27 1593 aaKnown RBP11.88□□□□□ -0.51
SAMD4A-211ENST00000557013 CEP164Q9UPV0 1460 aa11.88□□□□□ -0.51
SAMD4A-211ENST00000557013 ABCC8Q09428 1581 aa11.87□□□□□ -0.51
SAMD4A-211ENST00000557013 CUX2O14529 1486 aa11.87□□□□□ -0.51
SAMD4A-211ENST00000557013 SOGA1O94964 1423 aa11.86□□□□□ -0.51
SAMD4A-211ENST00000557013 TNIKQ9UKE5 1360 aa11.85□□□□□ -0.51
SAMD4A-211ENST00000557013 MRC2Q9UBG0 1479 aa11.84□□□□□ -0.51
SAMD4A-211ENST00000557013 SALL2Q9Y467 1007 aaPredicted RBP11.81□□□□□ -0.52
SAMD4A-211ENST00000557013 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.8□□□□□ -0.52
SAMD4A-211ENST00000557013 RANGAP1P46060 587 aaPredicted RBP11.79□□□□□ -0.52
SAMD4A-211ENST00000557013 RUSC2Q8N2Y8 1516 aa11.77□□□□□ -0.53
SAMD4A-211ENST00000557013 PRDM2Q13029 1718 aa11.77□□□□□ -0.53
SAMD4A-211ENST00000557013 WDR62O43379 1518 aa11.77□□□□□ -0.53
SAMD4A-211ENST00000557013 URB2Q14146 1524 aaKnown RBP11.77□□□□□ -0.53
SAMD4A-211ENST00000557013 RTN4Q9NQC3 1192 aaKnown RBP11.77□□□□□ -0.53
SAMD4A-211ENST00000557013 DEKP35659 375 aaKnown RBP11.75□□□□□ -0.53
SAMD4A-211ENST00000557013 RBM19Q9Y4C8 960 aaKnown RBP11.74□□□□□ -0.53
SAMD4A-211ENST00000557013 EEA1Q15075 1411 aa11.74□□□□□ -0.53
SAMD4A-211ENST00000557013 EIF5BO60841 1220 aaKnown RBP11.74□□□□□ -0.53
SAMD4A-211ENST00000557013 GOLGA3Q08378 1498 aa11.73□□□□□ -0.53
SAMD4A-211ENST00000557013 FBLN2P98095 1184 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms