RNA–Protein interactions for RNA: ENST00000481102.5

SSX2IP-207, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 5

Gene SSX2IP, Length 2,457 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-207ENST00000481102 NISCHQ9Y2I1 1504 aa42.68■■■■■ 4.42
SSX2IP-207ENST00000481102 CCDC180Q9P1Z9 1646 aa36.47■■■■□ 3.43
SSX2IP-207ENST00000481102 SHROOM4Q9ULL8 1493 aa36.13■■■■□ 3.37
SSX2IP-207ENST00000481102 ZCCHC6Q5VYS8 1495 aaKnown RBP36.01■■■■□ 3.35
SSX2IP-207ENST00000481102 DCAF8L2P0C7V8 631 aa35.6■■■■□ 3.29
SSX2IP-207ENST00000481102 SUPT5HO00267 1087 aaKnown RBP35.14■■■■□ 3.22
SSX2IP-207ENST00000481102 DCAF1Q9Y4B6 1507 aa34.95■■■■□ 3.18
SSX2IP-207ENST00000481102 ABCC9O60706 1549 aa34.34■■■■□ 3.09
SSX2IP-207ENST00000481102 SCRIBQ14160 1630 aa34.22■■■■□ 3.07
SSX2IP-207ENST00000481102 MYO15BQ96JP2 1530 aa34.1■■■■□ 3.05
SSX2IP-207ENST00000481102 CHIC1Q5VXU3 224 aa33.88■■■■□ 3.01
SSX2IP-207ENST00000481102 NACADO15069 1562 aa33.83■■■■□ 3.01
SSX2IP-207ENST00000481102 RSF1Q96T23 1441 aaPredicted RBP33.61■■■□□ 2.97
SSX2IP-207ENST00000481102 CECR2Q9BXF3 1484 aa33.41■■■□□ 2.94
SSX2IP-207ENST00000481102 RB1CC1Q8TDY2 1594 aa33.41■■■□□ 2.94
SSX2IP-207ENST00000481102 MROH2BQ7Z745 1585 aa33.22■■■□□ 2.91
SSX2IP-207ENST00000481102 WIZO95785 1651 aa33.03■■■□□ 2.88
SSX2IP-207ENST00000481102 UNC13AQ9UPW8 1703 aa33.02■■■□□ 2.88
SSX2IP-207ENST00000481102 LOC105371045A0A1W2PR82 267 aa32.94■■■□□ 2.86
SSX2IP-207ENST00000481102 BAZ1AQ9NRL2 1556 aaPredicted RBP32.78■■■□□ 2.84
SSX2IP-207ENST00000481102 PABPN1Q86U42 306 aaKnown RBP eCLIP32.77■■■□□ 2.84
SSX2IP-207ENST00000481102 TRIM41Q8WV44 630 aa32.7■■■□□ 2.83
SSX2IP-207ENST00000481102 SMARCA4P51532 1647 aa32.62■■■□□ 2.81
SSX2IP-207ENST00000481102 BICRAQ9NZM4 1560 aa32.62■■■□□ 2.81
SSX2IP-207ENST00000481102 FAM9AQ8IZU1 332 aaPredicted RBP32.52■■■□□ 2.8
SSX2IP-207ENST00000481102 TOP2AP11388 1531 aaKnown RBP32.42■■■□□ 2.78
SSX2IP-207ENST00000481102 EIF4G1Q04637 1599 aaKnown RBP32.33■■■□□ 2.77
SSX2IP-207ENST00000481102 EHMT2Q96KQ7 1210 aa32.32■■■□□ 2.76
SSX2IP-207ENST00000481102 PCGF6Q9BYE7 350 aa32.32■■■□□ 2.76
SSX2IP-207ENST00000481102 CCDC88BA6NC98 1476 aa32.32■■■□□ 2.76
SSX2IP-207ENST00000481102 SMARCA2P51531 1590 aa32.27■■■□□ 2.76
SSX2IP-207ENST00000481102 ABCC8Q09428 1581 aa32.12■■■□□ 2.73
SSX2IP-207ENST00000481102 PEG3Q9GZU2 1588 aa31.98■■■□□ 2.71
SSX2IP-207ENST00000481102 HRCP23327 699 aa31.94■■■□□ 2.7
SSX2IP-207ENST00000481102 ATAD2BQ9ULI0 1458 aa31.91■■■□□ 2.7
SSX2IP-207ENST00000481102 BAZ1BQ9UIG0 1483 aaKnown RBP31.78■■■□□ 2.68
SSX2IP-207ENST00000481102 TRIM26Q12899 539 aaPredicted RBP31.73■■■□□ 2.67
SSX2IP-207ENST00000481102 SOGA1O94964 1423 aa31.7■■■□□ 2.67
SSX2IP-207ENST00000481102 RUSC2Q8N2Y8 1516 aa31.62■■■□□ 2.65
SSX2IP-207ENST00000481102 WRNQ14191 1432 aaPredicted RBP eCLIP31.55■■■□□ 2.64
SSX2IP-207ENST00000481102 PPARGC1BQ86YN6 1023 aaKnown RBP31.53■■■□□ 2.64
SSX2IP-207ENST00000481102 SYNJ1O43426 1573 aa31.48■■■□□ 2.63
SSX2IP-207ENST00000481102 CSRNP3Q8WYN3 585 aa31.38■■■□□ 2.61
SSX2IP-207ENST00000481102 NCAPD3P42695 1498 aa31.34■■■□□ 2.61
SSX2IP-207ENST00000481102 HMGXB3Q12766 1538 aa31.28■■■□□ 2.6
SSX2IP-207ENST00000481102 EEA1Q15075 1411 aa31.26■■■□□ 2.59
SSX2IP-207ENST00000481102 CEP162Q5TB80 1403 aa31.25■■■□□ 2.59
SSX2IP-207ENST00000481102 UBTFP17480 764 aaKnown RBP31.23■■■□□ 2.59
SSX2IP-207ENST00000481102 TNIKQ9UKE5 1360 aa31.18■■■□□ 2.58
SSX2IP-207ENST00000481102 TTBK1Q5TCY1 1321 aaPredicted RBP31.12■■■□□ 2.57
SSX2IP-207ENST00000481102 GOLGA3Q08378 1498 aa31.1■■■□□ 2.57
SSX2IP-207ENST00000481102 TOP2BQ02880 1626 aa31.07■■■□□ 2.57
SSX2IP-207ENST00000481102 CEP164Q9UPV0 1460 aa30.98■■■□□ 2.55
SSX2IP-207ENST00000481102 BIVM-ERCC5R4GMW8 1640 aa30.97■■■□□ 2.55
SSX2IP-207ENST00000481102 CFTRP13569 1480 aa30.97■■■□□ 2.55
SSX2IP-207ENST00000481102 CUX1P39880 1505 aa30.95■■■□□ 2.54
SSX2IP-207ENST00000481102 KIF21BO75037 1637 aa30.95■■■□□ 2.54
SSX2IP-207ENST00000481102 RAPGEF2Q9Y4G8 1499 aa30.94■■■□□ 2.54
SSX2IP-207ENST00000481102 CC2D2AQ9P2K1 1620 aa30.9■■■□□ 2.54
SSX2IP-207ENST00000481102 RANGAP1P46060 587 aaPredicted RBP30.87■■■□□ 2.53
SSX2IP-207ENST00000481102 CLIP1P30622 1438 aa30.76■■■□□ 2.51
SSX2IP-207ENST00000481102 CADPSQ9ULU8 1353 aa30.72■■■□□ 2.51
SSX2IP-207ENST00000481102 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.7■■■□□ 2.51
SSX2IP-207ENST00000481102 ZEB1P37275 1124 aaPredicted RBP30.67■■■□□ 2.5
SSX2IP-207ENST00000481102 PRDM2Q13029 1718 aa30.66■■■□□ 2.5
SSX2IP-207ENST00000481102 PRXQ9BXM0 1461 aa30.64■■■□□ 2.49
SSX2IP-207ENST00000481102 KIF27Q86VH2 1401 aa30.59■■■□□ 2.49
SSX2IP-207ENST00000481102 VPS8Q8N3P4 1428 aa30.54■■■□□ 2.48
SSX2IP-207ENST00000481102 ERICH3Q5RHP9 1530 aa30.52■■■□□ 2.48
SSX2IP-207ENST00000481102 CCER1Q8TC90 406 aaPredicted RBP30.49■■■□□ 2.47
SSX2IP-207ENST00000481102 NESP48681 1621 aa30.49■■■□□ 2.47
SSX2IP-207ENST00000481102 CUX2O14529 1486 aa30.46■■■□□ 2.47
SSX2IP-207ENST00000481102 FGD5Q6ZNL6 1462 aa30.46■■■□□ 2.47
SSX2IP-207ENST00000481102 FANCD2Q9BXW9 1451 aa30.45■■■□□ 2.46
SSX2IP-207ENST00000481102 DNAJC5BQ9UF47 199 aa30.44■■■□□ 2.46
SSX2IP-207ENST00000481102 ARAP1Q96P48 1450 aa30.37■■■□□ 2.45
SSX2IP-207ENST00000481102 IGF1RP08069 1367 aa30.36■■■□□ 2.45
SSX2IP-207ENST00000481102 APLP2Q06481 763 aa30.32■■■□□ 2.44
SSX2IP-207ENST00000481102 HNRNPUL2Q1KMD3 747 aaKnown RBP30.28■■■□□ 2.44
SSX2IP-207ENST00000481102 RAD54L2Q9Y4B4 1467 aa30.26■■■□□ 2.44
SSX2IP-207ENST00000481102 TOPBP1Q92547 1522 aa30.2■■■□□ 2.42
SSX2IP-207ENST00000481102 ARHGAP35Q9NRY4 1499 aa30.2■■■□□ 2.42
SSX2IP-207ENST00000481102 CARMIL1Q5VZK9 1371 aa30.19■■■□□ 2.42
SSX2IP-207ENST00000481102 KANK4Q5T7N3 995 aaPredicted RBP30.19■■■□□ 2.42
SSX2IP-207ENST00000481102 DNMBPQ6XZF7 1577 aa30.18■■■□□ 2.42
SSX2IP-207ENST00000481102 POLA1P09884 1462 aaPredicted RBP30.17■■■□□ 2.42
SSX2IP-207ENST00000481102 URB2Q14146 1524 aaKnown RBP30.08■■■□□ 2.41
SSX2IP-207ENST00000481102 LAMC3Q9Y6N6 1575 aa30.06■■■□□ 2.4
SSX2IP-207ENST00000481102 ABCA10Q8WWZ4 1543 aa30.04■■■□□ 2.4
SSX2IP-207ENST00000481102 P3H3Q8IVL6 736 aa29.97■■■□□ 2.39
SSX2IP-207ENST00000481102 KIF21AQ7Z4S6 1674 aa29.92■■■□□ 2.38
SSX2IP-207ENST00000481102 TDRD9Q8NDG6 1382 aaKnown RBP29.91■■■□□ 2.38
SSX2IP-207ENST00000481102 PDS5BQ9NTI5 1447 aa29.88■■■□□ 2.37
SSX2IP-207ENST00000481102 WDR97A6NE52 1622 aa29.85■■■□□ 2.37
SSX2IP-207ENST00000481102 FHOD3Q2V2M9 1422 aa29.78■■■□□ 2.36
SSX2IP-207ENST00000481102 CUL7Q14999 1698 aa29.76■■■□□ 2.35
SSX2IP-207ENST00000481102 RRBP1Q9P2E9 1410 aaKnown RBP29.75■■■□□ 2.35
SSX2IP-207ENST00000481102 ABCA5Q8WWZ7 1642 aa29.74■■■□□ 2.35
SSX2IP-207ENST00000481102 ATP1B4Q9UN42 357 aaPredicted RBP29.74■■■□□ 2.35
SSX2IP-207ENST00000481102 TIAM1Q13009 1591 aa29.74■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms