RNA–Protein interactions for RNA: ENST00000572021.5

TRIM25-205, Transcript of tripartite motif containing 25, humanhuman

TSL 1 (best)

Gene TRIM25, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-205ENST00000572021 NISCHQ9Y2I1 1504 aa28.71■■■□□ 2.19
TRIM25-205ENST00000572021 CCDC180Q9P1Z9 1646 aa25.44■■□□□ 1.66
TRIM25-205ENST00000572021 ABCC9O60706 1549 aa24.91■■□□□ 1.58
TRIM25-205ENST00000572021 DCAF8L2P0C7V8 631 aa24.07■■□□□ 1.44
TRIM25-205ENST00000572021 ZCCHC6Q5VYS8 1495 aaKnown RBP23.93■■□□□ 1.42
TRIM25-205ENST00000572021 RB1CC1Q8TDY2 1594 aa23.92■■□□□ 1.42
TRIM25-205ENST00000572021 NACADO15069 1562 aa23.89■■□□□ 1.41
TRIM25-205ENST00000572021 MYO15BQ96JP2 1530 aa23.72■■□□□ 1.39
TRIM25-205ENST00000572021 DCAF1Q9Y4B6 1507 aa23.68■■□□□ 1.38
TRIM25-205ENST00000572021 UNC13AQ9UPW8 1703 aa23.47■■□□□ 1.35
TRIM25-205ENST00000572021 SCRIBQ14160 1630 aa23.34■■□□□ 1.33
TRIM25-205ENST00000572021 PABPN1Q86U42 306 aaKnown RBP eCLIP23.32■■□□□ 1.32
TRIM25-205ENST00000572021 BICRAQ9NZM4 1560 aa23.24■■□□□ 1.31
TRIM25-205ENST00000572021 SHROOM4Q9ULL8 1493 aa22.89■■□□□ 1.25
TRIM25-205ENST00000572021 DNAJC5BQ9UF47 199 aa22.8■■□□□ 1.24
TRIM25-205ENST00000572021 EIF4G1Q04637 1599 aaKnown RBP22.6■■□□□ 1.21
TRIM25-205ENST00000572021 CC2D2AQ9P2K1 1620 aa22.51■■□□□ 1.19
TRIM25-205ENST00000572021 CECR2Q9BXF3 1484 aa22.42■■□□□ 1.18
TRIM25-205ENST00000572021 SMARCA4P51532 1647 aa22.28■■□□□ 1.16
TRIM25-205ENST00000572021 BAZ1AQ9NRL2 1556 aaPredicted RBP22.23■■□□□ 1.15
TRIM25-205ENST00000572021 MROH2BQ7Z745 1585 aa22.18■■□□□ 1.14
TRIM25-205ENST00000572021 ATAD2BQ9ULI0 1458 aa22.11■■□□□ 1.13
TRIM25-205ENST00000572021 SMARCA2P51531 1590 aa22.06■■□□□ 1.12
TRIM25-205ENST00000572021 NCAPD3P42695 1498 aa22.04■■□□□ 1.12
TRIM25-205ENST00000572021 PEG3Q9GZU2 1588 aa21.99■■□□□ 1.11
TRIM25-205ENST00000572021 WIZO95785 1651 aa21.97■■□□□ 1.11
TRIM25-205ENST00000572021 HMGXB3Q12766 1538 aa21.95■■□□□ 1.1
TRIM25-205ENST00000572021 BAZ1BQ9UIG0 1483 aaKnown RBP21.94■■□□□ 1.1
TRIM25-205ENST00000572021 RSF1Q96T23 1441 aaPredicted RBP21.93■■□□□ 1.1
TRIM25-205ENST00000572021 TOP2AP11388 1531 aaKnown RBP21.67■■□□□ 1.06
TRIM25-205ENST00000572021 NESP48681 1621 aa21.6■■□□□ 1.05
TRIM25-205ENST00000572021 SUPT5HO00267 1087 aaKnown RBP21.55■■□□□ 1.04
TRIM25-205ENST00000572021 LAMC3Q9Y6N6 1575 aa21.46■■□□□ 1.03
TRIM25-205ENST00000572021 CCDC88BA6NC98 1476 aa21.45■■□□□ 1.03
TRIM25-205ENST00000572021 CADPSQ9ULU8 1353 aa21.43■■□□□ 1.02
TRIM25-205ENST00000572021 ERCC6Q03468 1493 aa21.43■■□□□ 1.02
TRIM25-205ENST00000572021 KIF21AQ7Z4S6 1674 aa21.34■■□□□ 1.01
TRIM25-205ENST00000572021 CFTRP13569 1480 aa21.32■■□□□ 1
TRIM25-205ENST00000572021 PDS5BQ9NTI5 1447 aa21.31■■□□□ 1
TRIM25-205ENST00000572021 FANCD2Q9BXW9 1451 aa21.22■□□□□ 0.99
TRIM25-205ENST00000572021 PRDM2Q13029 1718 aa21.2■□□□□ 0.98
TRIM25-205ENST00000572021 THOC2Q8NI27 1593 aaKnown RBP21.19■□□□□ 0.98
TRIM25-205ENST00000572021 CEP164Q9UPV0 1460 aa21.17■□□□□ 0.98
TRIM25-205ENST00000572021 MRC2Q9UBG0 1479 aa21.11■□□□□ 0.97
TRIM25-205ENST00000572021 CUX2O14529 1486 aa21.08■□□□□ 0.97
TRIM25-205ENST00000572021 WDR62O43379 1518 aa21.03■□□□□ 0.96
TRIM25-205ENST00000572021 URB2Q14146 1524 aaKnown RBP21.02■□□□□ 0.96
TRIM25-205ENST00000572021 TOPBP1Q92547 1522 aa20.89■□□□□ 0.93
TRIM25-205ENST00000572021 DNMBPQ6XZF7 1577 aa20.86■□□□□ 0.93
TRIM25-205ENST00000572021 ABCC8Q09428 1581 aa20.81■□□□□ 0.92
TRIM25-205ENST00000572021 CUX1P39880 1505 aa20.8■□□□□ 0.92
TRIM25-205ENST00000572021 POLA1P09884 1462 aaPredicted RBP20.72■□□□□ 0.91
TRIM25-205ENST00000572021 FGD5Q6ZNL6 1462 aa20.7■□□□□ 0.9
TRIM25-205ENST00000572021 IFT140Q96RY7 1462 aa20.69■□□□□ 0.9
TRIM25-205ENST00000572021 RAD54L2Q9Y4B4 1467 aa20.68■□□□□ 0.9
TRIM25-205ENST00000572021 WRNQ14191 1432 aaPredicted RBP eCLIP20.67■□□□□ 0.91e-7■■■■■ 66.8
TRIM25-205ENST00000572021 ZNF608Q9ULD9 1512 aaPredicted RBP20.67■□□□□ 0.9
TRIM25-205ENST00000572021 SYNJ1O43426 1573 aa20.66■□□□□ 0.9
TRIM25-205ENST00000572021 TARBP1Q13395 1621 aaKnown RBP20.66■□□□□ 0.9
TRIM25-205ENST00000572021 SOGA1O94964 1423 aa20.64■□□□□ 0.89
TRIM25-205ENST00000572021 TOP2BQ02880 1626 aa20.61■□□□□ 0.89
TRIM25-205ENST00000572021 BIVM-ERCC5R4GMW8 1640 aa20.61■□□□□ 0.89
TRIM25-205ENST00000572021 EIF4G3O43432 1585 aaKnown RBP20.58■□□□□ 0.88
TRIM25-205ENST00000572021 AQRO60306 1485 aaKnown RBP eCLIP20.57■□□□□ 0.886e-7■■■■□ 21.9
TRIM25-205ENST00000572021 TDRD9Q8NDG6 1382 aaKnown RBP20.55■□□□□ 0.88
TRIM25-205ENST00000572021 WDR97A6NE52 1622 aa20.52■□□□□ 0.87
TRIM25-205ENST00000572021 ABCA10Q8WWZ4 1543 aa20.46■□□□□ 0.87
TRIM25-205ENST00000572021 ABCA5Q8WWZ7 1642 aa20.4■□□□□ 0.86
TRIM25-205ENST00000572021 GAPVD1Q14C86 1478 aa20.39■□□□□ 0.85
TRIM25-205ENST00000572021 PBRM1Q86U86 1689 aa20.38■□□□□ 0.85
TRIM25-205ENST00000572021 SNAPC4Q5SXM2 1469 aa20.36■□□□□ 0.85
TRIM25-205ENST00000572021 DNAJC5Q9H3Z4 198 aa20.36■□□□□ 0.85
TRIM25-205ENST00000572021 GRIN2BQ13224 1484 aa20.36■□□□□ 0.85
TRIM25-205ENST00000572021 FBLN2P98095 1184 aa20.33■□□□□ 0.84
TRIM25-205ENST00000572021 CHD1O14646 1710 aa20.33■□□□□ 0.84
TRIM25-205ENST00000572021 TRIM41Q8WV44 630 aa20.29■□□□□ 0.84
TRIM25-205ENST00000572021 MAGI1Q96QZ7 1491 aaPredicted RBP20.27■□□□□ 0.84
TRIM25-205ENST00000572021 OSCARQ8IYS5 282 aa20.27■□□□□ 0.84
TRIM25-205ENST00000572021 CHMP7Q8WUX9 453 aaPredicted RBP20.22■□□□□ 0.83
TRIM25-205ENST00000572021 SYNJ2O15056 1496 aa20.21■□□□□ 0.83
TRIM25-205ENST00000572021 KIF27Q86VH2 1401 aa20.21■□□□□ 0.83
TRIM25-205ENST00000572021 ERICH3Q5RHP9 1530 aa20.2■□□□□ 0.82
TRIM25-205ENST00000572021 ADAMTS12P58397 1594 aa20.2■□□□□ 0.82
TRIM25-205ENST00000572021 RUSC2Q8N2Y8 1516 aa20.16■□□□□ 0.82
TRIM25-205ENST00000572021 FHAD1B1AJZ9 1412 aa20.14■□□□□ 0.81
TRIM25-205ENST00000572021 IGF1RP08069 1367 aa20.13■□□□□ 0.81
TRIM25-205ENST00000572021 CHIC1Q5VXU3 224 aa20.12■□□□□ 0.81
TRIM25-205ENST00000572021 GRIN2AQ12879 1464 aa20.11■□□□□ 0.81
TRIM25-205ENST00000572021 CUL7Q14999 1698 aa20.06■□□□□ 0.8
TRIM25-205ENST00000572021 CLASP1Q7Z460 1538 aa20.05■□□□□ 0.8
TRIM25-205ENST00000572021 CEP170Q5SW79 1584 aa20.05■□□□□ 0.8
TRIM25-205ENST00000572021 CARMIL1Q5VZK9 1371 aa20.02■□□□□ 0.8
TRIM25-205ENST00000572021 NUP160Q12769 1436 aa19.99■□□□□ 0.79
TRIM25-205ENST00000572021 RIMBP3CA6NJZ7 1639 aa19.99■□□□□ 0.79
TRIM25-205ENST00000572021 RIMBP3BA6NNM3 1639 aa19.99■□□□□ 0.79
TRIM25-205ENST00000572021 RIMBP3Q9UFD9 1639 aa19.99■□□□□ 0.79
TRIM25-205ENST00000572021 ARHGEF11O15085 1522 aa19.97■□□□□ 0.79
TRIM25-205ENST00000572021 FAM9AQ8IZU1 332 aaPredicted RBP19.95■□□□□ 0.78
TRIM25-205ENST00000572021 RAPGEF2Q9Y4G8 1499 aa19.9■□□□□ 0.78
TRIM25-205ENST00000572021 CSRNP3Q8WYN3 585 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms