RNA–Protein interactions for RNA: ENST00000574234.1

TRIM25-208, Transcript of tripartite motif containing 25, humanhuman

TSL 2

Gene TRIM25, Length 471 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-208ENST00000574234 CHIC1Q5VXU3 224 aa14.92□□□□□ -0.02
TRIM25-208ENST00000574234 AEBP2Q6ZN18 517 aaPredicted RBP14.6□□□□□ -0.07
TRIM25-208ENST00000574234 NISCHQ9Y2I1 1504 aa13.59□□□□□ -0.23
TRIM25-208ENST00000574234 PHF23Q9BUL5 403 aaPredicted RBP13.24□□□□□ -0.29
TRIM25-208ENST00000574234 ABCC9O60706 1549 aa12.93□□□□□ -0.34
TRIM25-208ENST00000574234 CCDC180Q9P1Z9 1646 aa12.61□□□□□ -0.39
TRIM25-208ENST00000574234 DNAJC5BQ9UF47 199 aa12.58□□□□□ -0.4
TRIM25-208ENST00000574234 PLPPR3Q6T4P5 718 aa12.4□□□□□ -0.42
TRIM25-208ENST00000574234 SENP3Q9H4L4 574 aaPredicted RBP12.21□□□□□ -0.45
TRIM25-208ENST00000574234 RB1CC1Q8TDY2 1594 aa12.18□□□□□ -0.46
TRIM25-208ENST00000574234 DNAJC5Q9H3Z4 198 aa12.04□□□□□ -0.48
TRIM25-208ENST00000574234 UNC13AQ9UPW8 1703 aa12.03□□□□□ -0.48
TRIM25-208ENST00000574234 NACADO15069 1562 aa11.96□□□□□ -0.49
TRIM25-208ENST00000574234 BICRAQ9NZM4 1560 aa11.84□□□□□ -0.51
TRIM25-208ENST00000574234 PABPN1Q86U42 306 aaKnown RBP eCLIP11.84□□□□□ -0.51
TRIM25-208ENST00000574234 CC2D2AQ9P2K1 1620 aa11.75□□□□□ -0.53
TRIM25-208ENST00000574234 CECR2Q9BXF3 1484 aa11.74□□□□□ -0.53
TRIM25-208ENST00000574234 SHROOM4Q9ULL8 1493 aa11.7□□□□□ -0.54
TRIM25-208ENST00000574234 MYO15BQ96JP2 1530 aa11.65□□□□□ -0.55
TRIM25-208ENST00000574234 ADRA2BP18089 450 aa11.64□□□□□ -0.55
TRIM25-208ENST00000574234 EHMT2Q96KQ7 1210 aa11.63□□□□□ -0.55
TRIM25-208ENST00000574234 KCNA4P22459 653 aa11.6□□□□□ -0.55
TRIM25-208ENST00000574234 EIF4G1Q04637 1599 aaKnown RBP11.58□□□□□ -0.55
TRIM25-208ENST00000574234 DCAF8L2P0C7V8 631 aa11.48□□□□□ -0.57
TRIM25-208ENST00000574234 CUX2O14529 1486 aa11.48□□□□□ -0.57
TRIM25-208ENST00000574234 PPP6R1Q9UPN7 881 aa11.44□□□□□ -0.58
TRIM25-208ENST00000574234 FOXD1Q16676 465 aa11.29□□□□□ -0.6
TRIM25-208ENST00000574234 SCRIBQ14160 1630 aa11.28□□□□□ -0.6
TRIM25-208ENST00000574234 DCAF1Q9Y4B6 1507 aa11.27□□□□□ -0.61
TRIM25-208ENST00000574234 ERCC6Q03468 1493 aa11.22□□□□□ -0.61
TRIM25-208ENST00000574234 CSRNP3Q8WYN3 585 aa11.22□□□□□ -0.61
TRIM25-208ENST00000574234 TRIM41Q8WV44 630 aa11.16□□□□□ -0.62
TRIM25-208ENST00000574234 ZCCHC6Q5VYS8 1495 aaKnown RBP11.15□□□□□ -0.62
TRIM25-208ENST00000574234 SLC4A1APQ9BWU0 796 aaKnown RBP11.15□□□□□ -0.62
TRIM25-208ENST00000574234 THOC2Q8NI27 1593 aaKnown RBP11.08□□□□□ -0.64
TRIM25-208ENST00000574234 PPP4R3CPQ6ZMV5 832 aa11.04□□□□□ -0.64
TRIM25-208ENST00000574234 NCAPD3P42695 1498 aa11□□□□□ -0.65
TRIM25-208ENST00000574234 NESP48681 1621 aa10.95□□□□□ -0.66
TRIM25-208ENST00000574234 KIF21AQ7Z4S6 1674 aa10.94□□□□□ -0.66
TRIM25-208ENST00000574234 HMGXB3Q12766 1538 aa10.93□□□□□ -0.66
TRIM25-208ENST00000574234 NCBP3Q53F19 620 aaKnown RBP10.92□□□□□ -0.66
TRIM25-208ENST00000574234 LAMC3Q9Y6N6 1575 aa10.91□□□□□ -0.66
TRIM25-208ENST00000574234 BAZ1AQ9NRL2 1556 aaPredicted RBP10.9□□□□□ -0.66
TRIM25-208ENST00000574234 SMARCA2P51531 1590 aa10.87□□□□□ -0.67
TRIM25-208ENST00000574234 ATAD2BQ9ULI0 1458 aa10.85□□□□□ -0.67
TRIM25-208ENST00000574234 NPM3O75607 178 aaKnown RBP10.8□□□□□ -0.68
TRIM25-208ENST00000574234 RIMBP3CA6NJZ7 1639 aa10.8□□□□□ -0.68
TRIM25-208ENST00000574234 RIMBP3BA6NNM3 1639 aa10.8□□□□□ -0.68
TRIM25-208ENST00000574234 RIMBP3Q9UFD9 1639 aa10.8□□□□□ -0.68
TRIM25-208ENST00000574234 WDR62O43379 1518 aa10.78□□□□□ -0.68
TRIM25-208ENST00000574234 SMARCA4P51532 1647 aa10.77□□□□□ -0.68
TRIM25-208ENST00000574234 PDS5BQ9NTI5 1447 aa10.77□□□□□ -0.68
TRIM25-208ENST00000574234 PIAS4Q8N2W9 510 aaPredicted RBP10.77□□□□□ -0.69
TRIM25-208ENST00000574234 OSCARQ8IYS5 282 aa10.75□□□□□ -0.69
TRIM25-208ENST00000574234 MRC2Q9UBG0 1479 aa10.73□□□□□ -0.69
TRIM25-208ENST00000574234 BAZ1BQ9UIG0 1483 aaKnown RBP10.72□□□□□ -0.69
TRIM25-208ENST00000574234 PEG3Q9GZU2 1588 aa10.72□□□□□ -0.69
TRIM25-208ENST00000574234 ZBTB22O15209 634 aa10.71□□□□□ -0.69
TRIM25-208ENST00000574234 ARHGEF11O15085 1522 aa10.66□□□□□ -0.7
TRIM25-208ENST00000574234 CADPSQ9ULU8 1353 aa10.58□□□□□ -0.72
TRIM25-208ENST00000574234 CEP164Q9UPV0 1460 aa10.57□□□□□ -0.72
TRIM25-208ENST00000574234 SLC24A1O60721 1099 aa10.57□□□□□ -0.72
TRIM25-208ENST00000574234 CNKSR2Q8WXI2 1034 aa10.56□□□□□ -0.72
TRIM25-208ENST00000574234 TRHP20396 242 aaPredicted RBP10.54□□□□□ -0.72
TRIM25-208ENST00000574234 ARAP1Q96P48 1450 aa10.49□□□□□ -0.73
TRIM25-208ENST00000574234 FANCD2Q9BXW9 1451 aa10.49□□□□□ -0.73
TRIM25-208ENST00000574234 CYB5RLQ6IPT4 315 aa10.48□□□□□ -0.73
TRIM25-208ENST00000574234 CHD1O14646 1710 aa10.47□□□□□ -0.73
TRIM25-208ENST00000574234 PRDM2Q13029 1718 aa10.46□□□□□ -0.74
TRIM25-208ENST00000574234 RTN4Q9NQC3 1192 aaKnown RBP10.45□□□□□ -0.74
TRIM25-208ENST00000574234 FOXD4L1Q9NU39 408 aa10.45□□□□□ -0.74
TRIM25-208ENST00000574234 URB2Q14146 1524 aaKnown RBP10.44□□□□□ -0.74
TRIM25-208ENST00000574234 MROH2BQ7Z745 1585 aa10.43□□□□□ -0.74
TRIM25-208ENST00000574234 RSF1Q96T23 1441 aaPredicted RBP10.42□□□□□ -0.74
TRIM25-208ENST00000574234 SCAF1Q9H7N4 1312 aaKnown RBP10.42□□□□□ -0.74
TRIM25-208ENST00000574234 AMER1Q5JTC6 1135 aaPredicted RBP10.41□□□□□ -0.74
TRIM25-208ENST00000574234 EIF4G3O43432 1585 aaKnown RBP10.39□□□□□ -0.75
TRIM25-208ENST00000574234 CFTRP13569 1480 aa10.39□□□□□ -0.75
TRIM25-208ENST00000574234 IFT140Q96RY7 1462 aa10.38□□□□□ -0.75
TRIM25-208ENST00000574234 ZNF608Q9ULD9 1512 aaPredicted RBP10.38□□□□□ -0.75
TRIM25-208ENST00000574234 ILDR1Q86SU0 546 aaPredicted RBP10.33□□□□□ -0.76
TRIM25-208ENST00000574234 WIZO95785 1651 aa10.33□□□□□ -0.76
TRIM25-208ENST00000574234 CLASP1Q7Z460 1538 aa10.28□□□□□ -0.76
TRIM25-208ENST00000574234 TARBP1Q13395 1621 aaKnown RBP10.25□□□□□ -0.77
TRIM25-208ENST00000574234 KIF13AQ9H1H9 1805 aa10.24□□□□□ -0.77
TRIM25-208ENST00000574234 TOPBP1Q92547 1522 aa10.23□□□□□ -0.77
TRIM25-208ENST00000574234 SYNJ1O43426 1573 aa10.22□□□□□ -0.77
TRIM25-208ENST00000574234 ABCC8Q09428 1581 aa10.22□□□□□ -0.77
TRIM25-208ENST00000574234 WDR97A6NE52 1622 aa10.19□□□□□ -0.78
TRIM25-208ENST00000574234 DNMBPQ6XZF7 1577 aa10.19□□□□□ -0.78
TRIM25-208ENST00000574234 MAPK8IP2Q13387 824 aaPredicted RBP10.19□□□□□ -0.78
TRIM25-208ENST00000574234 RNF216Q9NWF9 866 aaPredicted RBP10.18□□□□□ -0.78
TRIM25-208ENST00000574234 AQRO60306 1485 aaKnown RBP eCLIP10.17□□□□□ -0.78
TRIM25-208ENST00000574234 TOP2AP11388 1531 aaKnown RBP10.16□□□□□ -0.78
TRIM25-208ENST00000574234 GAPVD1Q14C86 1478 aa10.15□□□□□ -0.78
TRIM25-208ENST00000574234 FBLN2P98095 1184 aa10.14□□□□□ -0.79
TRIM25-208ENST00000574234 SNAPC4Q5SXM2 1469 aa10.1□□□□□ -0.79
TRIM25-208ENST00000574234 MAGI1Q96QZ7 1491 aaPredicted RBP10.1□□□□□ -0.79
TRIM25-208ENST00000574234 ERCC6L2Q5T890 1561 aa10.09□□□□□ -0.79
TRIM25-208ENST00000574234 POLA1P09884 1462 aaPredicted RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms