RNA–Protein interactions for RNA: ENST00000614971.4

LTN1-207, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,756 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-207ENST00000614971 DCAF8L2P0C7V8 631 aa7.05□□□□□ -1.28
LTN1-207ENST00000614971 SUPT5HO00267 1087 aaKnown RBP6.66□□□□□ -1.34
LTN1-207ENST00000614971 SHROOM4Q9ULL8 1493 aa6.65□□□□□ -1.34
LTN1-207ENST00000614971 NISCHQ9Y2I1 1504 aa6.64□□□□□ -1.35
LTN1-207ENST00000614971 EHMT2Q96KQ7 1210 aa6.59□□□□□ -1.35
LTN1-207ENST00000614971 FAM9AQ8IZU1 332 aaPredicted RBP6.32□□□□□ -1.4
LTN1-207ENST00000614971 TTBK1Q5TCY1 1321 aaPredicted RBP6.31□□□□□ -1.4
LTN1-207ENST00000614971 RANGAP1P46060 587 aaPredicted RBP6.23□□□□□ -1.41
LTN1-207ENST00000614971 PPARGC1BQ86YN6 1023 aaKnown RBP6.12□□□□□ -1.43
LTN1-207ENST00000614971 PCGF6Q9BYE7 350 aa6.12□□□□□ -1.43
LTN1-207ENST00000614971 ATP1B4Q9UN42 357 aaPredicted RBP6.03□□□□□ -1.44
LTN1-207ENST00000614971 TRIM41Q8WV44 630 aa6.03□□□□□ -1.44
LTN1-207ENST00000614971 LOC105371045A0A1W2PR82 267 aa5.99□□□□□ -1.45
LTN1-207ENST00000614971 APLP2Q06481 763 aa5.98□□□□□ -1.45
LTN1-207ENST00000614971 UBTFP17480 764 aaKnown RBP5.97□□□□□ -1.45
LTN1-207ENST00000614971 PABPN1Q86U42 306 aaKnown RBP eCLIP5.94□□□□□ -1.46
LTN1-207ENST00000614971 ABCC9O60706 1549 aa5.9□□□□□ -1.46
LTN1-207ENST00000614971 CCER1Q8TC90 406 aaPredicted RBP5.89□□□□□ -1.47
LTN1-207ENST00000614971 ITGAEP38570 1179 aa5.88□□□□□ -1.47
LTN1-207ENST00000614971 CHIC1Q5VXU3 224 aa5.85□□□□□ -1.47
LTN1-207ENST00000614971 YTHDC1Q96MU7 727 aaKnown RBP5.84□□□□□ -1.47
LTN1-207ENST00000614971 CNGB1Q14028 1251 aaPredicted RBP5.83□□□□□ -1.48
LTN1-207ENST00000614971 HNRNPUL2Q1KMD3 747 aaKnown RBP5.8□□□□□ -1.48
LTN1-207ENST00000614971 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.79□□□□□ -1.48
LTN1-207ENST00000614971 POLR3GLQ9BT43 218 aa5.73□□□□□ -1.49
LTN1-207ENST00000614971 ARID3CA6NKF2 412 aa5.73□□□□□ -1.49
LTN1-207ENST00000614971 MYT1LQ9UL68 1186 aa5.72□□□□□ -1.49
LTN1-207ENST00000614971 TRIM26Q12899 539 aaPredicted RBP5.7□□□□□ -1.5
LTN1-207ENST00000614971 P3H3Q8IVL6 736 aa5.68□□□□□ -1.5
LTN1-207ENST00000614971 FBLN2P98095 1184 aa5.68□□□□□ -1.5
LTN1-207ENST00000614971 HRCP23327 699 aa5.67□□□□□ -1.5
LTN1-207ENST00000614971 FAM50AQ14320 339 aaKnown RBP5.64□□□□□ -1.51
LTN1-207ENST00000614971 NEUROD1Q13562 356 aa5.61□□□□□ -1.51
LTN1-207ENST00000614971 ZEB1P37275 1124 aaPredicted RBP5.61□□□□□ -1.51
LTN1-207ENST00000614971 CENPBP07199 599 aaPredicted RBP5.61□□□□□ -1.51
LTN1-207ENST00000614971 SCRIBQ14160 1630 aa5.6□□□□□ -1.51
LTN1-207ENST00000614971 ZNF326Q5BKZ1 582 aaKnown RBP5.58□□□□□ -1.52
LTN1-207ENST00000614971 SLC4A1APQ9BWU0 796 aaKnown RBP5.57□□□□□ -1.52
LTN1-207ENST00000614971 PELP1Q8IZL8 1130 aaKnown RBP5.57□□□□□ -1.52
LTN1-207ENST00000614971 TRIM52Q96A61 297 aa5.56□□□□□ -1.52
LTN1-207ENST00000614971 SENP3Q9H4L4 574 aaPredicted RBP5.54□□□□□ -1.52
LTN1-207ENST00000614971 PLPPR3Q6T4P5 718 aa5.53□□□□□ -1.52
LTN1-207ENST00000614971 DIEXFQ68CQ4 756 aaKnown RBP5.52□□□□□ -1.53
LTN1-207ENST00000614971 ZNF777Q9ULD5 760 aaPredicted RBP5.52□□□□□ -1.53
LTN1-207ENST00000614971 BCANQ96GW7 911 aa5.51□□□□□ -1.53
LTN1-207ENST00000614971 CSRNP3Q8WYN3 585 aa5.51□□□□□ -1.53
LTN1-207ENST00000614971 NEFLP07196 543 aa5.51□□□□□ -1.53
LTN1-207ENST00000614971 BCL11AQ9H165 835 aa5.49□□□□□ -1.53
LTN1-207ENST00000614971 ERICH6Q7L0X2 663 aa5.49□□□□□ -1.53
LTN1-207ENST00000614971 HIRIP3Q9BW71 556 aaPredicted RBP5.48□□□□□ -1.53
LTN1-207ENST00000614971 MYO15BQ96JP2 1530 aa5.47□□□□□ -1.53
LTN1-207ENST00000614971 SENP3-EIF4A1A0A087X0R7 540 aa5.47□□□□□ -1.53
LTN1-207ENST00000614971 CHIC2Q9UKJ5 165 aa5.47□□□□□ -1.53
LTN1-207ENST00000614971 ZCCHC6Q5VYS8 1495 aaKnown RBP5.47□□□□□ -1.53
LTN1-207ENST00000614971 GTF3C3Q9Y5Q9 886 aa5.41□□□□□ -1.54
LTN1-207ENST00000614971 SALL2Q9Y467 1007 aaPredicted RBP5.41□□□□□ -1.54
LTN1-207ENST00000614971 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.4□□□□□ -1.541e-7■■■■□ 24.4
LTN1-207ENST00000614971 PLEKHG5O94827 1062 aa5.4□□□□□ -1.55
LTN1-207ENST00000614971 CHGAP10645 457 aaKnown RBP5.4□□□□□ -1.55
LTN1-207ENST00000614971 CECR2Q9BXF3 1484 aa5.39□□□□□ -1.55
LTN1-207ENST00000614971 SLC24A1O60721 1099 aa5.38□□□□□ -1.55
LTN1-207ENST00000614971 RSF1Q96T23 1441 aaPredicted RBP5.38□□□□□ -1.55
LTN1-207ENST00000614971 DDX10Q13206 875 aaKnown RBP5.37□□□□□ -1.55
LTN1-207ENST00000614971 KCNH8Q96L42 1107 aa5.37□□□□□ -1.55
LTN1-207ENST00000614971 KDM2AQ9Y2K7 1162 aa5.37□□□□□ -1.55
LTN1-207ENST00000614971 MYT1Q01538 1121 aa5.36□□□□□ -1.55
LTN1-207ENST00000614971 ZNF316A6NFI3 1004 aaPredicted RBP5.36□□□□□ -1.55
LTN1-207ENST00000614971 RRP7BPQ9NSQ0 103 aa5.36□□□□□ -1.55
LTN1-207ENST00000614971 CHMP7Q8WUX9 453 aaPredicted RBP5.34□□□□□ -1.55
LTN1-207ENST00000614971 CLSPNQ9HAW4 1339 aa5.34□□□□□ -1.55
LTN1-207ENST00000614971 ANP32CO43423 234 aa5.34□□□□□ -1.55
LTN1-207ENST00000614971 FAM9BQ8IZU0 186 aa5.32□□□□□ -1.56
LTN1-207ENST00000614971 IRX6P78412 446 aaPredicted RBP5.32□□□□□ -1.56
LTN1-207ENST00000614971 RGL3Q3MIN7 710 aa5.31□□□□□ -1.56
LTN1-207ENST00000614971 MIER1Q8N108 512 aa5.3□□□□□ -1.56
LTN1-207ENST00000614971 CLIP1P30622 1438 aa5.3□□□□□ -1.56
LTN1-207ENST00000614971 DAXXQ9UER7 740 aaPredicted RBP5.3□□□□□ -1.56
LTN1-207ENST00000614971 SOGA1O94964 1423 aa5.29□□□□□ -1.56
LTN1-207ENST00000614971 SIN3AQ96ST3 1273 aa5.29□□□□□ -1.56
LTN1-207ENST00000614971 CCDC180Q9P1Z9 1646 aa5.29□□□□□ -1.56
LTN1-207ENST00000614971 MTUS2Q5JR59 1369 aa5.29□□□□□ -1.56
LTN1-207ENST00000614971 STAG3Q9UJ98 1225 aa5.29□□□□□ -1.56
LTN1-207ENST00000614971 TONSLQ96HA7 1378 aa5.28□□□□□ -1.56
LTN1-207ENST00000614971 HNRNPUQ00839 825 aaKnown RBP eCLIP5.28□□□□□ -1.56
LTN1-207ENST00000614971 CDK11AQ9UQ88 783 aaPredicted RBP5.28□□□□□ -1.56
LTN1-207ENST00000614971 DCAF1Q9Y4B6 1507 aa5.28□□□□□ -1.56
LTN1-207ENST00000614971 CEP162Q5TB80 1403 aa5.28□□□□□ -1.56
LTN1-207ENST00000614971 ABCC8Q09428 1581 aa5.27□□□□□ -1.57
LTN1-207ENST00000614971 SCAF1Q9H7N4 1312 aaKnown RBP5.27□□□□□ -1.57
LTN1-207ENST00000614971 RB1CC1Q8TDY2 1594 aa5.27□□□□□ -1.57
LTN1-207ENST00000614971 WRNQ14191 1432 aaPredicted RBP eCLIP5.27□□□□□ -1.57
LTN1-207ENST00000614971 BAZ1BQ9UIG0 1483 aaKnown RBP5.27□□□□□ -1.57
LTN1-207ENST00000614971 NPM1P06748 294 aaKnown RBP eCLIP5.27□□□□□ -1.57
LTN1-207ENST00000614971 FKBP8Q14318 412 aa5.26□□□□□ -1.57
LTN1-207ENST00000614971 ACIN1Q9UKV3 1341 aaKnown RBP5.26□□□□□ -1.57
LTN1-207ENST00000614971 FOXD1Q16676 465 aa5.26□□□□□ -1.57
LTN1-207ENST00000614971 NPM2Q86SE8 214 aaKnown RBP5.26□□□□□ -1.57
LTN1-207ENST00000614971 ESF1Q9H501 851 aaKnown RBP5.26□□□□□ -1.57
LTN1-207ENST00000614971 MROH2BQ7Z745 1585 aa5.25□□□□□ -1.57
LTN1-207ENST00000614971 TSPY4P0CV99 314 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms