Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMOQ99835 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.79■□□□□ 0.6
SMOQ99835 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SMOQ99835 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMOQ99835 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.79■□□□□ 0.6
SMOQ99835 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SMOQ99835 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.79■□□□□ 0.6
SMOQ99835 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMOQ99835 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMOQ99835 KRT18P55-202ENST00000578578 1546 ntBASIC18.79■□□□□ 0.6
SMOQ99835 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SMOQ99835 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.79■□□□□ 0.6
SMOQ99835 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SMOQ99835 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.78■□□□□ 0.6
SMOQ99835 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMOQ99835 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.78■□□□□ 0.6
SMOQ99835 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.78■□□□□ 0.6
SMOQ99835 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMOQ99835 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMOQ99835 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SMOQ99835 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.78■□□□□ 0.6
SMOQ99835 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SMOQ99835 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
SMOQ99835 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.78■□□□□ 0.6
SMOQ99835 AKR1C7P-201ENST00000305623 895 ntBASIC18.78■□□□□ 0.6
SMOQ99835 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.78■□□□□ 0.6
SMOQ99835 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMOQ99835 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.78■□□□□ 0.6
SMOQ99835 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.78■□□□□ 0.6
SMOQ99835 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.78■□□□□ 0.6
SMOQ99835 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.78■□□□□ 0.6
SMOQ99835 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SMOQ99835 AL691432.3-201ENST00000621860 400 ntBASIC18.78■□□□□ 0.6
SMOQ99835 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.78■□□□□ 0.6
SMOQ99835 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMOQ99835 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.78■□□□□ 0.6
SMOQ99835 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMOQ99835 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMOQ99835 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.78■□□□□ 0.6
SMOQ99835 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMOQ99835 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMOQ99835 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.78■□□□□ 0.6
SMOQ99835 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMOQ99835 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMOQ99835 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.78■□□□□ 0.6
SMOQ99835 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMOQ99835 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SMOQ99835 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SMOQ99835 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMOQ99835 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SMOQ99835 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMOQ99835 AC009949.1-201ENST00000623048 1830 ntBASIC18.77■□□□□ 0.6
SMOQ99835 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMOQ99835 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.77■□□□□ 0.6
SMOQ99835 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMOQ99835 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMOQ99835 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SMOQ99835 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.77■□□□□ 0.6
SMOQ99835 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.77■□□□□ 0.6
SMOQ99835 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.77■□□□□ 0.6
SMOQ99835 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMOQ99835 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.77■□□□□ 0.6
SMOQ99835 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SMOQ99835 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMOQ99835 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
SMOQ99835 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SMOQ99835 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SMOQ99835 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SMOQ99835 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
SMOQ99835 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.59
SMOQ99835 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
SMOQ99835 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.76■□□□□ 0.59
SMOQ99835 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMOQ99835 AL390961.4-201ENST00000623958 2535 ntBASIC18.76■□□□□ 0.59
SMOQ99835 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SMOQ99835 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.76■□□□□ 0.59
SMOQ99835 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMOQ99835 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMOQ99835 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SMOQ99835 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.76■□□□□ 0.59
SMOQ99835 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMOQ99835 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.76■□□□□ 0.59
SMOQ99835 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMOQ99835 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMOQ99835 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
SMOQ99835 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMOQ99835 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SMOQ99835 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SMOQ99835 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMOQ99835 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.76■□□□□ 0.59
SMOQ99835 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMOQ99835 AC132008.2-207ENST00000454517 770 ntBASIC18.76■□□□□ 0.59
SMOQ99835 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.76■□□□□ 0.59
SMOQ99835 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.76■□□□□ 0.59
SMOQ99835 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.76■□□□□ 0.59
SMOQ99835 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SMOQ99835 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.76■□□□□ 0.59
SMOQ99835 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.76■□□□□ 0.59
SMOQ99835 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.76■□□□□ 0.59
SMOQ99835 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms