Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
CHMP4BP1P59074 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20.51■□□□□ 0.87
CHMP4BP1P59074 HEIH-201ENST00000623091 1652 ntBASIC20.51■□□□□ 0.87
CHMP4BP1P59074 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CHMP4BP1P59074 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC20.51■□□□□ 0.87
CHMP4BP1P59074 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
CHMP4BP1P59074 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.5■□□□□ 0.87
CHMP4BP1P59074 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP4BP1P59074 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP4BP1P59074 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP4BP1P59074 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CHMP4BP1P59074 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP4BP1P59074 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP4BP1P59074 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP4BP1P59074 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP4BP1P59074 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP4BP1P59074 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP4BP1P59074 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
CHMP4BP1P59074 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC20.5■□□□□ 0.87
CHMP4BP1P59074 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC20.5■□□□□ 0.87
CHMP4BP1P59074 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC20.5■□□□□ 0.87
CHMP4BP1P59074 VENTXP7-201ENST00000475503 772 ntBASIC20.5■□□□□ 0.87
CHMP4BP1P59074 AC091607.1-201ENST00000490318 1060 ntBASIC20.5■□□□□ 0.87
CHMP4BP1P59074 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP4BP1P59074 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
CHMP4BP1P59074 MIR3180-4-201ENST00000582223 153 ntBASIC20.5■□□□□ 0.87
CHMP4BP1P59074 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP4BP1P59074 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP4BP1P59074 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP4BP1P59074 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP4BP1P59074 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP4BP1P59074 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.5■□□□□ 0.87
CHMP4BP1P59074 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP4BP1P59074 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP4BP1P59074 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CHMP4BP1P59074 AC090340.1-201ENST00000620778 4980 ntBASIC20.5■□□□□ 0.87
CHMP4BP1P59074 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP4BP1P59074 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CHMP4BP1P59074 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP4BP1P59074 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP4BP1P59074 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
CHMP4BP1P59074 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.5■□□□□ 0.87
CHMP4BP1P59074 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP4BP1P59074 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP4BP1P59074 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
CHMP4BP1P59074 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
CHMP4BP1P59074 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.5■□□□□ 0.87
CHMP4BP1P59074 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC20.5■□□□□ 0.87
CHMP4BP1P59074 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
CHMP4BP1P59074 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC20.49■□□□□ 0.87
CHMP4BP1P59074 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHMP4BP1P59074 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHMP4BP1P59074 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.49■□□□□ 0.87
CHMP4BP1P59074 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CHMP4BP1P59074 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHMP4BP1P59074 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.49■□□□□ 0.87
CHMP4BP1P59074 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHMP4BP1P59074 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHMP4BP1P59074 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
CHMP4BP1P59074 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHMP4BP1P59074 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHMP4BP1P59074 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHMP4BP1P59074 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHMP4BP1P59074 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC20.49■□□□□ 0.87
CHMP4BP1P59074 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
CHMP4BP1P59074 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC20.49■□□□□ 0.87
CHMP4BP1P59074 KRT16P4-201ENST00000453883 522 ntBASIC20.49■□□□□ 0.87
CHMP4BP1P59074 AC009065.1-201ENST00000564055 1225 ntBASIC20.49■□□□□ 0.87
CHMP4BP1P59074 AC011840.4-201ENST00000578471 627 ntBASIC20.49■□□□□ 0.87
CHMP4BP1P59074 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC20.49■□□□□ 0.87
CHMP4BP1P59074 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
CHMP4BP1P59074 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHMP4BP1P59074 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC20.49■□□□□ 0.87
CHMP4BP1P59074 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHMP4BP1P59074 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC20.49■□□□□ 0.87
CHMP4BP1P59074 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.49■□□□□ 0.87
CHMP4BP1P59074 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHMP4BP1P59074 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC20.49■□□□□ 0.87
CHMP4BP1P59074 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
CHMP4BP1P59074 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CHMP4BP1P59074 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.48■□□□□ 0.87
CHMP4BP1P59074 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.48■□□□□ 0.87
CHMP4BP1P59074 NSUN5P1-202ENST00000421140 1535 ntBASIC20.48■□□□□ 0.87
CHMP4BP1P59074 NSUN5P2-203ENST00000457352 1529 ntBASIC20.48■□□□□ 0.87
CHMP4BP1P59074 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
CHMP4BP1P59074 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CHMP4BP1P59074 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC20.48■□□□□ 0.87
CHMP4BP1P59074 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHMP4BP1P59074 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CHMP4BP1P59074 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHMP4BP1P59074 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHMP4BP1P59074 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CHMP4BP1P59074 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
CHMP4BP1P59074 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20.48■□□□□ 0.87
CHMP4BP1P59074 ABR-204ENST00000543210 1049 ntTSL 2 BASIC20.48■□□□□ 0.87
CHMP4BP1P59074 ABR-217ENST00000572441 563 ntTSL 4 BASIC20.48■□□□□ 0.87
CHMP4BP1P59074 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC20.48■□□□□ 0.87
CHMP4BP1P59074 AC104692.2-201ENST00000603054 253 ntBASIC20.48■□□□□ 0.87
CHMP4BP1P59074 AL353801.3-201ENST00000609898 542 ntBASIC20.48■□□□□ 0.87
CHMP4BP1P59074 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms