Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CDRT1O95170 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDRT1O95170 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDRT1O95170 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDRT1O95170 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDRT1O95170 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDRT1O95170 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDRT1O95170 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDRT1O95170 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC16.04■□□□□ 0.16
CDRT1O95170 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDRT1O95170 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDRT1O95170 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC16.04■□□□□ 0.16
CDRT1O95170 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDRT1O95170 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.04■□□□□ 0.16
CDRT1O95170 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDRT1O95170 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CDRT1O95170 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDRT1O95170 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDRT1O95170 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDRT1O95170 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDRT1O95170 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDRT1O95170 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.03■□□□□ 0.16
CDRT1O95170 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDRT1O95170 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDRT1O95170 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
CDRT1O95170 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.03■□□□□ 0.16
CDRT1O95170 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDRT1O95170 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CDRT1O95170 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDRT1O95170 SERF2-207ENST00000409614 582 ntTSL 2 BASIC16.03■□□□□ 0.16
CDRT1O95170 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
CDRT1O95170 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.03■□□□□ 0.16
CDRT1O95170 MMAB-206ENST00000540016 945 ntTSL 3 BASIC16.03■□□□□ 0.16
CDRT1O95170 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC16.03■□□□□ 0.16
CDRT1O95170 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.03■□□□□ 0.16
CDRT1O95170 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDRT1O95170 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDRT1O95170 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDRT1O95170 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDRT1O95170 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDRT1O95170 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDRT1O95170 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDRT1O95170 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDRT1O95170 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDRT1O95170 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.03■□□□□ 0.16
CDRT1O95170 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CDRT1O95170 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.03■□□□□ 0.16
CDRT1O95170 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CDRT1O95170 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
CDRT1O95170 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
CDRT1O95170 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDRT1O95170 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDRT1O95170 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
CDRT1O95170 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.02■□□□□ 0.16
CDRT1O95170 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDRT1O95170 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
CDRT1O95170 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.16
CDRT1O95170 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDRT1O95170 AC099343.3-201ENST00000605834 2503 ntBASIC16.02■□□□□ 0.16
CDRT1O95170 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDRT1O95170 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDRT1O95170 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CDRT1O95170 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.02■□□□□ 0.16
CDRT1O95170 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDRT1O95170 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.02■□□□□ 0.16
CDRT1O95170 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
CDRT1O95170 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDRT1O95170 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CDRT1O95170 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.02■□□□□ 0.16
CDRT1O95170 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDRT1O95170 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDRT1O95170 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CDRT1O95170 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDRT1O95170 AP000593.1-201ENST00000393668 712 ntBASIC16.02■□□□□ 0.16
CDRT1O95170 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.02■□□□□ 0.16
CDRT1O95170 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.02■□□□□ 0.16
CDRT1O95170 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC16.02■□□□□ 0.16
CDRT1O95170 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.02■□□□□ 0.16
CDRT1O95170 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.02■□□□□ 0.16
CDRT1O95170 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.02■□□□□ 0.16
CDRT1O95170 AL445675.2-201ENST00000620291 557 ntBASIC16.02■□□□□ 0.16
CDRT1O95170 AC131212.4-201ENST00000623606 975 ntBASIC16.02■□□□□ 0.16
CDRT1O95170 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDRT1O95170 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.15
CDRT1O95170 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.02■□□□□ 0.15
CDRT1O95170 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.02■□□□□ 0.15
CDRT1O95170 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
CDRT1O95170 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CDRT1O95170 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
CDRT1O95170 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CDRT1O95170 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CDRT1O95170 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
CDRT1O95170 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CDRT1O95170 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.15
CDRT1O95170 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CDRT1O95170 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
CDRT1O95170 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CDRT1O95170 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CDRT1O95170 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDRT1O95170 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms