Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 REXO1L9P-201ENST00000604264 2108 ntBASIC18.48■□□□□ 0.55
TSPAN3O60637 AL591684.3-201ENST00000605187 298 ntBASIC18.48■□□□□ 0.55
TSPAN3O60637 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
TSPAN3O60637 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
TSPAN3O60637 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TSPAN3O60637 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.48■□□□□ 0.55
TSPAN3O60637 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TSPAN3O60637 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
TSPAN3O60637 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
TSPAN3O60637 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.48■□□□□ 0.55
TSPAN3O60637 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.48■□□□□ 0.55
TSPAN3O60637 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
TSPAN3O60637 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TSPAN3O60637 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.47■□□□□ 0.55
TSPAN3O60637 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
TSPAN3O60637 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.47■□□□□ 0.55
TSPAN3O60637 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TSPAN3O60637 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
TSPAN3O60637 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TSPAN3O60637 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TSPAN3O60637 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TSPAN3O60637 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TSPAN3O60637 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TSPAN3O60637 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TSPAN3O60637 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.47■□□□□ 0.55
TSPAN3O60637 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
TSPAN3O60637 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TSPAN3O60637 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TSPAN3O60637 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
TSPAN3O60637 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
TSPAN3O60637 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.47■□□□□ 0.55
TSPAN3O60637 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.47■□□□□ 0.55
TSPAN3O60637 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.47■□□□□ 0.55
TSPAN3O60637 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.47■□□□□ 0.55
TSPAN3O60637 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.47■□□□□ 0.55
TSPAN3O60637 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.47■□□□□ 0.55
TSPAN3O60637 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
TSPAN3O60637 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.47■□□□□ 0.55
TSPAN3O60637 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TSPAN3O60637 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.47■□□□□ 0.55
TSPAN3O60637 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
TSPAN3O60637 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TSPAN3O60637 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TSPAN3O60637 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
TSPAN3O60637 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TSPAN3O60637 AC125634.1-201ENST00000438758 1403 ntBASIC18.47■□□□□ 0.55
TSPAN3O60637 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TSPAN3O60637 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TSPAN3O60637 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.46■□□□□ 0.55
TSPAN3O60637 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TSPAN3O60637 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.46■□□□□ 0.55
TSPAN3O60637 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TSPAN3O60637 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TSPAN3O60637 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.46■□□□□ 0.55
TSPAN3O60637 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
TSPAN3O60637 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.46■□□□□ 0.55
TSPAN3O60637 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TSPAN3O60637 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
TSPAN3O60637 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.46■□□□□ 0.55
TSPAN3O60637 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TSPAN3O60637 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TSPAN3O60637 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TSPAN3O60637 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TSPAN3O60637 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.46■□□□□ 0.55
TSPAN3O60637 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.46■□□□□ 0.55
TSPAN3O60637 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.46■□□□□ 0.55
TSPAN3O60637 AL138831.2-201ENST00000606564 490 ntBASIC18.46■□□□□ 0.55
TSPAN3O60637 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TSPAN3O60637 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
TSPAN3O60637 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TSPAN3O60637 AC090340.1-201ENST00000620778 4980 ntBASIC18.46■□□□□ 0.55
TSPAN3O60637 NEFHP1-201ENST00000412845 2629 ntBASIC18.46■□□□□ 0.55
TSPAN3O60637 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.46■□□□□ 0.55
TSPAN3O60637 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TSPAN3O60637 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TSPAN3O60637 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TSPAN3O60637 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TSPAN3O60637 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.46■□□□□ 0.54
TSPAN3O60637 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
TSPAN3O60637 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
TSPAN3O60637 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
TSPAN3O60637 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TSPAN3O60637 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.45■□□□□ 0.54
TSPAN3O60637 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TSPAN3O60637 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TSPAN3O60637 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.45■□□□□ 0.54
TSPAN3O60637 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TSPAN3O60637 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.45■□□□□ 0.54
TSPAN3O60637 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.45■□□□□ 0.54
TSPAN3O60637 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TSPAN3O60637 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TSPAN3O60637 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.45■□□□□ 0.54
TSPAN3O60637 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
TSPAN3O60637 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TSPAN3O60637 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
TSPAN3O60637 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TSPAN3O60637 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.45■□□□□ 0.54
TSPAN3O60637 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TSPAN3O60637 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TSPAN3O60637 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms