Protein–RNA interactions for Protein: J3QR89

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 54 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
J3QR89 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
J3QR89 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
J3QR89 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
J3QR89 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC12.09□□□□□ -0.47
J3QR89 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
J3QR89 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC12.09□□□□□ -0.47
J3QR89 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
J3QR89 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC12.09□□□□□ -0.47
J3QR89 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
J3QR89 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
J3QR89 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
J3QR89 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
J3QR89 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
J3QR89 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
J3QR89 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
J3QR89 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
J3QR89 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.47
J3QR89 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
J3QR89 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
J3QR89 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC12.08□□□□□ -0.48
J3QR89 FLYWCH1P1-201ENST00000460917 1874 ntBASIC12.08□□□□□ -0.48
J3QR89 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
J3QR89 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
J3QR89 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
J3QR89 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC12.08□□□□□ -0.48
J3QR89 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
J3QR89 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
J3QR89 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
J3QR89 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
J3QR89 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC12.08□□□□□ -0.48
J3QR89 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
J3QR89 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
J3QR89 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
J3QR89 AL031595.1-201ENST00000623969 4709 ntBASIC12.08□□□□□ -0.48
J3QR89 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
J3QR89 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
J3QR89 CHML-204ENST00000638121 920 ntTSL 2 BASIC12.08□□□□□ -0.48
J3QR89 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
J3QR89 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
J3QR89 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
J3QR89 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
J3QR89 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
J3QR89 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
J3QR89 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
J3QR89 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
J3QR89 CSPG4P11-201ENST00000560634 4910 ntBASIC12.08□□□□□ -0.48
J3QR89 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
J3QR89 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
J3QR89 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC12.08□□□□□ -0.48
J3QR89 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC12.08□□□□□ -0.48
J3QR89 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
J3QR89 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
J3QR89 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
J3QR89 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
J3QR89 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
J3QR89 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
J3QR89 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
J3QR89 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
J3QR89 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC12.07□□□□□ -0.48
J3QR89 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
J3QR89 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC12.07□□□□□ -0.48
J3QR89 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
J3QR89 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
J3QR89 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC12.07□□□□□ -0.48
J3QR89 REST-206ENST00000612429 1376 ntTSL 5 BASIC12.07□□□□□ -0.48
J3QR89 REST-207ENST00000616975 1370 ntTSL 5 BASIC12.07□□□□□ -0.48
J3QR89 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
J3QR89 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
J3QR89 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
J3QR89 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
J3QR89 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
J3QR89 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
J3QR89 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
J3QR89 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC12.07□□□□□ -0.48
J3QR89 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
J3QR89 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
J3QR89 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
J3QR89 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
J3QR89 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
J3QR89 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
J3QR89 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC12.07□□□□□ -0.48
J3QR89 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
J3QR89 RP9P-202ENST00000450133 1212 ntBASIC12.07□□□□□ -0.48
J3QR89 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC12.07□□□□□ -0.48
J3QR89 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
J3QR89 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
J3QR89 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
J3QR89 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC12.07□□□□□ -0.48
J3QR89 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
J3QR89 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
J3QR89 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
J3QR89 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC12.07□□□□□ -0.48
J3QR89 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
J3QR89 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC12.07□□□□□ -0.48
J3QR89 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
J3QR89 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
J3QR89 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
J3QR89 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
J3QR89 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC12.07□□□□□ -0.48
J3QR89 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC12.07□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms