Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 AL138966.2-201ENST00000621997 464 ntBASIC18.04■□□□□ 0.48
CCDC68Q9H2F9 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC68Q9H2F9 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC68Q9H2F9 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CCDC68Q9H2F9 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC68Q9H2F9 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC68Q9H2F9 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CCDC68Q9H2F9 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC68Q9H2F9 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC68Q9H2F9 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC68Q9H2F9 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC68Q9H2F9 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC68Q9H2F9 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
CCDC68Q9H2F9 AC008764.6-201ENST00000595909 2069 ntBASIC18.03■□□□□ 0.48
CCDC68Q9H2F9 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC68Q9H2F9 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC68Q9H2F9 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.03■□□□□ 0.48
CCDC68Q9H2F9 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC68Q9H2F9 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC68Q9H2F9 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC68Q9H2F9 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.03■□□□□ 0.48
CCDC68Q9H2F9 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC68Q9H2F9 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.03■□□□□ 0.48
CCDC68Q9H2F9 AL137013.1-201ENST00000432946 1228 ntBASIC18.03■□□□□ 0.48
CCDC68Q9H2F9 PVRIG2P-201ENST00000435460 978 ntBASIC18.03■□□□□ 0.48
CCDC68Q9H2F9 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.03■□□□□ 0.48
CCDC68Q9H2F9 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.03■□□□□ 0.48
CCDC68Q9H2F9 AL157888.1-201ENST00000631930 593 ntBASIC18.03■□□□□ 0.48
CCDC68Q9H2F9 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC68Q9H2F9 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.03■□□□□ 0.48
CCDC68Q9H2F9 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC68Q9H2F9 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CCDC68Q9H2F9 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC68Q9H2F9 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC68Q9H2F9 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC68Q9H2F9 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC68Q9H2F9 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC68Q9H2F9 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CCDC68Q9H2F9 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.03■□□□□ 0.48
CCDC68Q9H2F9 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CCDC68Q9H2F9 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.02■□□□□ 0.48
CCDC68Q9H2F9 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC68Q9H2F9 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC68Q9H2F9 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC68Q9H2F9 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC68Q9H2F9 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
CCDC68Q9H2F9 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
CCDC68Q9H2F9 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC68Q9H2F9 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC68Q9H2F9 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC68Q9H2F9 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC68Q9H2F9 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC68Q9H2F9 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC68Q9H2F9 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.48
CCDC68Q9H2F9 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC68Q9H2F9 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.02■□□□□ 0.48
CCDC68Q9H2F9 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.02■□□□□ 0.48
CCDC68Q9H2F9 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.02■□□□□ 0.48
CCDC68Q9H2F9 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC68Q9H2F9 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CCDC68Q9H2F9 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.02■□□□□ 0.48
CCDC68Q9H2F9 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
CCDC68Q9H2F9 COX11P1-201ENST00000489116 835 ntBASIC18.02■□□□□ 0.48
CCDC68Q9H2F9 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.02■□□□□ 0.48
CCDC68Q9H2F9 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.02■□□□□ 0.48
CCDC68Q9H2F9 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.02■□□□□ 0.48
CCDC68Q9H2F9 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.02■□□□□ 0.48
CCDC68Q9H2F9 GCSHP2-201ENST00000560971 527 ntBASIC18.02■□□□□ 0.48
CCDC68Q9H2F9 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
CCDC68Q9H2F9 AL023973.1-201ENST00000624619 620 ntBASIC18.02■□□□□ 0.48
CCDC68Q9H2F9 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
CCDC68Q9H2F9 NFIC-211ENST00000641145 8399 ntBASIC18.02■□□□□ 0.48
CCDC68Q9H2F9 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC68Q9H2F9 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC68Q9H2F9 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC68Q9H2F9 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC68Q9H2F9 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC68Q9H2F9 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.02■□□□□ 0.47
CCDC68Q9H2F9 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC68Q9H2F9 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC68Q9H2F9 AC011270.2-201ENST00000624293 2550 ntBASIC18.01■□□□□ 0.47
CCDC68Q9H2F9 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC68Q9H2F9 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC68Q9H2F9 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC68Q9H2F9 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC68Q9H2F9 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC68Q9H2F9 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CCDC68Q9H2F9 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC68Q9H2F9 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC68Q9H2F9 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC68Q9H2F9 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CCDC68Q9H2F9 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.01■□□□□ 0.47
CCDC68Q9H2F9 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CCDC68Q9H2F9 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC68Q9H2F9 AC113347.1-201ENST00000413321 391 ntBASIC18.01■□□□□ 0.47
CCDC68Q9H2F9 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC68Q9H2F9 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC68Q9H2F9 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.01■□□□□ 0.47
CCDC68Q9H2F9 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.01■□□□□ 0.47
CCDC68Q9H2F9 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms