Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.016e-6■□□□□ 9.2
SND1Q7KZF4 NCBP2-205ENST00000428425 2220 ntTSL 1 (best)14.92□□□□□ -0.026e-6■□□□□ 9.2
SND1Q7KZF4 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.026e-6■□□□□ 9.2
SND1Q7KZF4 EXOSC7-210ENST00000491476 1395 ntTSL 514.89□□□□□ -0.036e-6■□□□□ 9.2
SND1Q7KZF4 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC14.85□□□□□ -0.036e-6■□□□□ 9.2
SND1Q7KZF4 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.042e-7■□□□□ 9.2
SND1Q7KZF4 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC14.79□□□□□ -0.041e-9■□□□□ 9.2
SND1Q7KZF4 EXOSC7-203ENST00000461361 1593 ntTSL 214.77□□□□□ -0.046e-6■□□□□ 9.2
SND1Q7KZF4 MSH6-210ENST00000540021 3930 ntTSL 2 BASIC14.6□□□□□ -0.076e-6■□□□□ 9.2
SND1Q7KZF4 SUPT4H1-205ENST00000581166 1401 ntTSL 214.51□□□□□ -0.096e-6■□□□□ 9.2
SND1Q7KZF4 RNH1-209ENST00000525522 3281 ntTSL 1 (best)14.48□□□□□ -0.092e-7■□□□□ 9.2
SND1Q7KZF4 CYSTM1-202ENST00000504227 588 ntTSL 514.44□□□□□ -0.12e-7■□□□□ 9.2
SND1Q7KZF4 CYSTM1-204ENST00000509789 813 ntTSL 414.44□□□□□ -0.12e-7■□□□□ 9.2
SND1Q7KZF4 MSH6-215ENST00000622629 4324 ntTSL 5 BASIC14.27□□□□□ -0.126e-6■□□□□ 9.2
SND1Q7KZF4 ATP2A3-203ENST00000359983 3290 ntTSL 5 BASIC14.17□□□□□ -0.146e-6■□□□□ 9.2
SND1Q7KZF4 MSH6-213ENST00000614496 4150 ntTSL 1 (best) BASIC14.05□□□□□ -0.166e-6■□□□□ 9.2
SND1Q7KZF4 BUD23-205ENST00000428163 577 ntTSL 314.04□□□□□ -0.163e-8■□□□□ 9.2
SND1Q7KZF4 NDUFS8-207ENST00000526339 689 ntTSL 214.04□□□□□ -0.166e-6■□□□□ 9.2
SND1Q7KZF4 MRPS12-202ENST00000402029 929 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.186e-6■□□□□ 9.2
SND1Q7KZF4 OCIAD1-220ENST00000509963 432 ntTSL 213.74□□□□□ -0.217e-7■□□□□ 9.2
SND1Q7KZF4 ATP2A3-215ENST00000576957 1159 ntTSL 213.73□□□□□ -0.216e-6■□□□□ 9.2
SND1Q7KZF4 EMC4-213ENST00000561372 466 ntTSL 313.66□□□□□ -0.223e-8■□□□□ 9.2
SND1Q7KZF4 H3F3B-205ENST00000587171 586 ntTSL 213.56□□□□□ -0.246e-27■□□□□ 9.2
SND1Q7KZF4 H3F3B-213ENST00000593254 894 ntTSL 513.56□□□□□ -0.246e-27■□□□□ 9.2
SND1Q7KZF4 GSTK1-201ENST00000358406 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.261e-9■□□□□ 9.2
SND1Q7KZF4 COTL1-206ENST00000567786 531 ntTSL 313.41□□□□□ -0.266e-6■□□□□ 9.2
SND1Q7KZF4 NCBP2-201ENST00000321256 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.276e-6■□□□□ 9.2
SND1Q7KZF4 GSTK1-204ENST00000442394 2219 ntTSL 513.3□□□□□ -0.281e-9■□□□□ 9.2
SND1Q7KZF4 MSH6-204ENST00000445503 4158 ntTSL 1 (best)13.29□□□□□ -0.286e-6■□□□□ 9.2
SND1Q7KZF4 ATP2A3-211ENST00000572176 428 ntTSL 213.26□□□□□ -0.296e-6■□□□□ 9.2
SND1Q7KZF4 NUP214-226ENST00000531600 1775 ntTSL 213.2□□□□□ -0.32e-7■□□□□ 9.2
SND1Q7KZF4 EXOSC7-204ENST00000467846 1149 ntTSL 213.09□□□□□ -0.316e-6■□□□□ 9.2
SND1Q7KZF4 PRSS21-206ENST00000574265 860 ntTSL 313.07□□□□□ -0.323e-8■□□□□ 9.2
SND1Q7KZF4 EXOSC7-205ENST00000468667 831 ntTSL 512.9□□□□□ -0.346e-6■□□□□ 9.2
SND1Q7KZF4 NDUFS8-211ENST00000529645 606 ntTSL 312.9□□□□□ -0.346e-6■□□□□ 9.2
SND1Q7KZF4 OR51B5-201ENST00000300773 939 ntAPPRIS P1 BASIC12.88□□□□□ -0.356e-6■□□□□ 9.2
SND1Q7KZF4 PRSS21-204ENST00000570629 626 ntTSL 212.86□□□□□ -0.353e-8■□□□□ 9.2
SND1Q7KZF4 EXOSC7-201ENST00000265564 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.356e-6■□□□□ 9.2
SND1Q7KZF4 BTF3-202ENST00000380591 1237 ntTSL 1 (best) BASIC12.81□□□□□ -0.361e-9■□□□□ 9.2
SND1Q7KZF4 AC087380.1-204ENST00000418729 1026 ntTSL 1 (best)12.78□□□□□ -0.366e-6■□□□□ 9.2
SND1Q7KZF4 PAFAH1B3-203ENST00000594989 649 ntTSL 512.36□□□□□ -0.436e-6■□□□□ 9.2
SND1Q7KZF4 MSH6-201ENST00000234420 7476 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.446e-6■□□□□ 9.2
SND1Q7KZF4 NUP214-203ENST00000451030 5021 ntTSL 1 (best) BASIC12.28□□□□□ -0.442e-7■□□□□ 9.2
SND1Q7KZF4 NCBP2-210ENST00000467803 771 ntTSL 312.26□□□□□ -0.456e-6■□□□□ 9.2
SND1Q7KZF4 PPT2-252ENST00000465047 238 ntTSL 312.23□□□□□ -0.456e-6■□□□□ 9.2
SND1Q7KZF4 H3F3B-212ENST00000592643 795 ntTSL 3 BASIC12.21□□□□□ -0.456e-27■□□□□ 9.2
SND1Q7KZF4 OCIAD1-228ENST00000514981 653 ntTSL 312.18□□□□□ -0.467e-7■□□□□ 9.2
SND1Q7KZF4 GSTK1-203ENST00000436038 556 ntTSL 512.16□□□□□ -0.461e-9■□□□□ 9.2
SND1Q7KZF4 NASP-205ENST00000437901 874 ntTSL 512.13□□□□□ -0.471e-22■□□□□ 9.2
SND1Q7KZF4 NASP-204ENST00000437362 999 ntTSL 212.1□□□□□ -0.471e-22■□□□□ 9.2
SND1Q7KZF4 NASP-212ENST00000527359 743 ntTSL 312.07□□□□□ -0.481e-22■□□□□ 9.2
SND1Q7KZF4 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC11.98□□□□□ -0.496e-6■□□□□ 9.2
SND1Q7KZF4 NDUFS8-210ENST00000528492 353 ntTSL 1 (best) BASIC11.95□□□□□ -0.56e-6■□□□□ 9.2
SND1Q7KZF4 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC11.9□□□□□ -0.56e-6■□□□□ 9.2
SND1Q7KZF4 GSTK1-205ENST00000443571 850 ntTSL 2 BASIC11.89□□□□□ -0.511e-9■□□□□ 9.2
SND1Q7KZF4 MTHFD1-210ENST00000555252 2053 ntTSL 1 (best)11.87□□□□□ -0.516e-6■□□□□ 9.2
SND1Q7KZF4 NCBP2-212ENST00000479647 552 ntTSL 311.77□□□□□ -0.536e-6■□□□□ 9.2
SND1Q7KZF4 SUPT4H1-203ENST00000579289 318 ntTSL 311.59□□□□□ -0.556e-6■□□□□ 9.2
SND1Q7KZF4 VCP-204ENST00000466100 508 ntTSL 211.56□□□□□ -0.561e-9■□□□□ 9.2
SND1Q7KZF4 NUP214-204ENST00000453861 3208 ntTSL 511.22□□□□□ -0.612e-7■□□□□ 9.2
SND1Q7KZF4 H3F3B-210ENST00000591890 783 ntTSL 3 BASIC11.07□□□□□ -0.646e-27■□□□□ 9.2
SND1Q7KZF4 NASP-206ENST00000453748 2080 ntTSL 210.96□□□□□ -0.661e-22■□□□□ 9.2
SND1Q7KZF4 SUPT4H1-204ENST00000580947 574 ntAPPRIS P1 TSL 4 BASIC10.87□□□□□ -0.676e-6■□□□□ 9.2
SND1Q7KZF4 CYSTM1-203ENST00000509589 665 ntTSL 310.63□□□□□ -0.712e-7■□□□□ 9.2
SND1Q7KZF4 NASP-202ENST00000351223 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.751e-22■□□□□ 9.2
SND1Q7KZF4 NUP214-220ENST00000529286 493 ntTSL 310.22□□□□□ -0.772e-7■□□□□ 9.2
SND1Q7KZF4 EXOSC7-208ENST00000482004 559 ntTSL 410.2□□□□□ -0.786e-6■□□□□ 9.2
SND1Q7KZF4 H3F3B-204ENST00000586607 551 ntAPPRIS P1 TSL 4 BASIC10.15□□□□□ -0.786e-27■□□□□ 9.2
SND1Q7KZF4 SNRNP40-201ENST00000263694 1597 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.796e-6■□□□□ 9.2
SND1Q7KZF4 PHB2-212ENST00000545555 309 ntTSL 510.11□□□□□ -0.796e-6■□□□□ 9.2
SND1Q7KZF4 MTHFD1-202ENST00000545908 6814 ntTSL 2 BASIC9.99□□□□□ -0.816e-6■□□□□ 9.2
SND1Q7KZF4 MTHFD1-203ENST00000553391 568 ntTSL 49.97□□□□□ -0.816e-6■□□□□ 9.2
SND1Q7KZF4 PKM-211ENST00000564276 753 ntTSL 1 (best)9.86□□□□□ -0.832e-15■□□□□ 9.2
SND1Q7KZF4 SUPT4H1-206ENST00000581204 539 ntTSL 29.82□□□□□ -0.846e-6■□□□□ 9.2
SND1Q7KZF4 NASP-216ENST00000528238 894 ntAPPRIS ALT2 TSL 59.75□□□□□ -0.851e-22■□□□□ 9.2
SND1Q7KZF4 MTHFD1-201ENST00000216605 3136 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.896e-6■□□□□ 9.2
SND1Q7KZF4 GSTK1-206ENST00000473649 2692 ntTSL 29.48□□□□□ -0.891e-9■□□□□ 9.2
SND1Q7KZF4 NUP214-201ENST00000359428 7600 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.892e-7■□□□□ 9.2
SND1Q7KZF4 ANXA2-223ENST00000559647 484 ntTSL 29.46□□□□□ -0.93e-8■□□□□ 9.2
SND1Q7KZF4 MGME1-205ENST00000467391 740 ntTSL 1 (best)9.37□□□□□ -0.916e-6■□□□□ 9.2
SND1Q7KZF4 NASP-224ENST00000537798 3097 ntAPPRIS ALT2 TSL 2 BASIC9.35□□□□□ -0.911e-22■□□□□ 9.2
SND1Q7KZF4 BTF3-204ENST00000508901 954 ntTSL 29.35□□□□□ -0.911e-9■□□□□ 9.2
SND1Q7KZF4 SNRNP40-202ENST00000373720 1087 ntTSL 1 (best) BASIC9.3□□□□□ -0.926e-6■□□□□ 9.2
SND1Q7KZF4 NCBP2-209ENST00000463783 4161 ntTSL 1 (best)9.24□□□□□ -0.936e-6■□□□□ 9.2
SND1Q7KZF4 MCM4-214ENST00000523853 354 ntTSL 29.03□□□□□ -0.966e-6■□□□□ 9.2
SND1Q7KZF4 MGME1-204ENST00000463219 571 ntTSL 38.99□□□□□ -0.976e-6■□□□□ 9.2
SND1Q7KZF4 NASP-201ENST00000350030 3207 ntAPPRIS P4 TSL 1 (best) BASIC8.91□□□□□ -0.981e-22■□□□□ 9.2
SND1Q7KZF4 ATP5G2-206ENST00000550241 406 ntTSL 38.88□□□□□ -0.993e-21■□□□□ 9.2
SND1Q7KZF4 SEC31A-240ENST00000515062 597 ntTSL 38.74□□□□□ -1.013e-8■□□□□ 9.2
SND1Q7KZF4 PAICS-205ENST00000508554 698 ntTSL 28.71□□□□□ -1.022e-9■□□□□ 9.2
SND1Q7KZF4 BTF3-201ENST00000335895 897 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.021e-9■□□□□ 9.2
SND1Q7KZF4 SEC31A-213ENST00000503937 1564 ntTSL 1 (best)8.65□□□□□ -1.023e-8■□□□□ 9.2
SND1Q7KZF4 NASP-221ENST00000531612 938 ntAPPRIS ALT2 TSL 58.65□□□□□ -1.021e-22■□□□□ 9.2
SND1Q7KZF4 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.052e-7■□□□□ 9.2
SND1Q7KZF4 NASP-210ENST00000481782 3659 ntTSL 28.46□□□□□ -1.051e-22■□□□□ 9.2
SND1Q7KZF4 BTF3-209ENST00000514505 740 ntTSL 58.43□□□□□ -1.061e-9■□□□□ 9.2
SND1Q7KZF4 SDHB-206ENST00000485092 636 ntTSL 28.42□□□□□ -1.066e-6■□□□□ 9.2
SND1Q7KZF4 BTF3-208ENST00000514360 1177 ntTSL 28.37□□□□□ -1.071e-9■□□□□ 9.2
SND1Q7KZF4 NASP-218ENST00000530073 2740 ntTSL 28.35□□□□□ -1.071e-22■□□□□ 9.2
SND1Q7KZF4 NASP-203ENST00000372052 1458 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.081e-22■□□□□ 9.2
Retrieved 100 of 13,567 protein–RNA pairs in 351.8 ms