RNA–Protein interactions for RNA: ENST00000509789.2

CYSTM1-204, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 4

Gene CYSTM1, Length 813 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-204ENST00000509789 NISCHQ9Y2I1 1504 aa32.4■■■□□ 2.78
CYSTM1-204ENST00000509789 AEBP2Q6ZN18 517 aaPredicted RBP30.77■■■□□ 2.52
CYSTM1-204ENST00000509789 CHIC1Q5VXU3 224 aa28.75■■■□□ 2.19
CYSTM1-204ENST00000509789 CCDC180Q9P1Z9 1646 aa28.5■■■□□ 2.15
CYSTM1-204ENST00000509789 ABCC9O60706 1549 aa27.45■■□□□ 1.98
CYSTM1-204ENST00000509789 ZCCHC6Q5VYS8 1495 aaKnown RBP27.07■■□□□ 1.92
CYSTM1-204ENST00000509789 DCAF8L2P0C7V8 631 aa27■■□□□ 1.91
CYSTM1-204ENST00000509789 DCAF1Q9Y4B6 1507 aa26.81■■□□□ 1.88
CYSTM1-204ENST00000509789 MYO15BQ96JP2 1530 aa26.72■■□□□ 1.87
CYSTM1-204ENST00000509789 NACADO15069 1562 aa26.71■■□□□ 1.87
CYSTM1-204ENST00000509789 RB1CC1Q8TDY2 1594 aa26.61■■□□□ 1.85
CYSTM1-204ENST00000509789 SENP3Q9H4L4 574 aaPredicted RBP26.19■■□□□ 1.78
CYSTM1-204ENST00000509789 SCRIBQ14160 1630 aa26.09■■□□□ 1.77
CYSTM1-204ENST00000509789 SHROOM4Q9ULL8 1493 aa26.01■■□□□ 1.75
CYSTM1-204ENST00000509789 UNC13AQ9UPW8 1703 aa25.92■■□□□ 1.74
CYSTM1-204ENST00000509789 PHF23Q9BUL5 403 aaPredicted RBP25.83■■□□□ 1.73
CYSTM1-204ENST00000509789 PABPN1Q86U42 306 aaKnown RBP eCLIP25.81■■□□□ 1.72
CYSTM1-204ENST00000509789 BICRAQ9NZM4 1560 aa25.74■■□□□ 1.71
CYSTM1-204ENST00000509789 CECR2Q9BXF3 1484 aa25.18■■□□□ 1.62
CYSTM1-204ENST00000509789 BAZ1AQ9NRL2 1556 aaPredicted RBP25.07■■□□□ 1.6
CYSTM1-204ENST00000509789 EIF4G1Q04637 1599 aaKnown RBP25.05■■□□□ 1.6
CYSTM1-204ENST00000509789 SMARCA4P51532 1647 aa24.99■■□□□ 1.59
CYSTM1-204ENST00000509789 MROH2BQ7Z745 1585 aa24.97■■□□□ 1.59
CYSTM1-204ENST00000509789 RSF1Q96T23 1441 aaPredicted RBP24.92■■□□□ 1.58
CYSTM1-204ENST00000509789 SUPT5HO00267 1087 aaKnown RBP24.81■■□□□ 1.56
CYSTM1-204ENST00000509789 CC2D2AQ9P2K1 1620 aa24.81■■□□□ 1.56
CYSTM1-204ENST00000509789 ATAD2BQ9ULI0 1458 aa24.76■■□□□ 1.55
CYSTM1-204ENST00000509789 SMARCA2P51531 1590 aa24.76■■□□□ 1.55
CYSTM1-204ENST00000509789 PEG3Q9GZU2 1588 aa24.72■■□□□ 1.55
CYSTM1-204ENST00000509789 DNAJC5BQ9UF47 199 aa24.72■■□□□ 1.55
CYSTM1-204ENST00000509789 WIZO95785 1651 aa24.71■■□□□ 1.55
CYSTM1-204ENST00000509789 NCAPD3P42695 1498 aa24.67■■□□□ 1.54
CYSTM1-204ENST00000509789 BAZ1BQ9UIG0 1483 aaKnown RBP24.59■■□□□ 1.53
CYSTM1-204ENST00000509789 HMGXB3Q12766 1538 aa24.56■■□□□ 1.52
CYSTM1-204ENST00000509789 FOXD1Q16676 465 aa24.53■■□□□ 1.52
CYSTM1-204ENST00000509789 TOP2AP11388 1531 aaKnown RBP24.49■■□□□ 1.51
CYSTM1-204ENST00000509789 CCDC88BA6NC98 1476 aa24.24■■□□□ 1.47
CYSTM1-204ENST00000509789 CADPSQ9ULU8 1353 aa24.02■■□□□ 1.44
CYSTM1-204ENST00000509789 CFTRP13569 1480 aa23.95■■□□□ 1.42
CYSTM1-204ENST00000509789 LAMC3Q9Y6N6 1575 aa23.9■■□□□ 1.42
CYSTM1-204ENST00000509789 NESP48681 1621 aa23.89■■□□□ 1.42
CYSTM1-204ENST00000509789 PDS5BQ9NTI5 1447 aa23.79■■□□□ 1.4
CYSTM1-204ENST00000509789 FANCD2Q9BXW9 1451 aa23.71■■□□□ 1.39
CYSTM1-204ENST00000509789 PRDM2Q13029 1718 aa23.7■■□□□ 1.39
CYSTM1-204ENST00000509789 ERCC6Q03468 1493 aa23.64■■□□□ 1.38
CYSTM1-204ENST00000509789 CEP164Q9UPV0 1460 aa23.62■■□□□ 1.37
CYSTM1-204ENST00000509789 KIF21AQ7Z4S6 1674 aa23.57■■□□□ 1.36
CYSTM1-204ENST00000509789 WRNQ14191 1432 aaPredicted RBP eCLIP23.5■■□□□ 1.35
CYSTM1-204ENST00000509789 ABCC8Q09428 1581 aa23.48■■□□□ 1.35
CYSTM1-204ENST00000509789 MRC2Q9UBG0 1479 aa23.48■■□□□ 1.35
CYSTM1-204ENST00000509789 URB2Q14146 1524 aaKnown RBP23.41■■□□□ 1.34
CYSTM1-204ENST00000509789 TRIM41Q8WV44 630 aa23.4■■□□□ 1.34
CYSTM1-204ENST00000509789 CUX1P39880 1505 aa23.39■■□□□ 1.34
CYSTM1-204ENST00000509789 DNMBPQ6XZF7 1577 aa23.39■■□□□ 1.33
CYSTM1-204ENST00000509789 TOPBP1Q92547 1522 aa23.38■■□□□ 1.33
CYSTM1-204ENST00000509789 SYNJ1O43426 1573 aa23.34■■□□□ 1.33
CYSTM1-204ENST00000509789 THOC2Q8NI27 1593 aaKnown RBP23.34■■□□□ 1.33
CYSTM1-204ENST00000509789 WDR62O43379 1518 aa23.33■■□□□ 1.33
CYSTM1-204ENST00000509789 TOP2BQ02880 1626 aa23.33■■□□□ 1.32
CYSTM1-204ENST00000509789 BIVM-ERCC5R4GMW8 1640 aa23.29■■□□□ 1.32
CYSTM1-204ENST00000509789 POTEDQ86YR6 584 aa23.27■■□□□ 1.32
CYSTM1-204ENST00000509789 FGD5Q6ZNL6 1462 aa23.24■■□□□ 1.31
CYSTM1-204ENST00000509789 POLA1P09884 1462 aaPredicted RBP23.21■■□□□ 1.31
CYSTM1-204ENST00000509789 SOGA1O94964 1423 aa23.18■■□□□ 1.3
CYSTM1-204ENST00000509789 CUX2O14529 1486 aa23.15■■□□□ 1.3
CYSTM1-204ENST00000509789 RAD54L2Q9Y4B4 1467 aa23.12■■□□□ 1.29
CYSTM1-204ENST00000509789 IFT140Q96RY7 1462 aa23.11■■□□□ 1.29
CYSTM1-204ENST00000509789 TARBP1Q13395 1621 aaKnown RBP23.04■■□□□ 1.28
CYSTM1-204ENST00000509789 ABCA10Q8WWZ4 1543 aa23.04■■□□□ 1.28
CYSTM1-204ENST00000509789 MSH5O43196 834 aa23.04■■□□□ 1.28
CYSTM1-204ENST00000509789 TDRD9Q8NDG6 1382 aaKnown RBP22.99■■□□□ 1.27
CYSTM1-204ENST00000509789 KIF27Q86VH2 1401 aa22.98■■□□□ 1.27
CYSTM1-204ENST00000509789 ZNF608Q9ULD9 1512 aaPredicted RBP22.94■■□□□ 1.26
CYSTM1-204ENST00000509789 WDR97A6NE52 1622 aa22.93■■□□□ 1.26
CYSTM1-204ENST00000509789 AQRO60306 1485 aaKnown RBP eCLIP22.92■■□□□ 1.26
CYSTM1-204ENST00000509789 FAM9AQ8IZU1 332 aaPredicted RBP22.92■■□□□ 1.26
CYSTM1-204ENST00000509789 GAPVD1Q14C86 1478 aa22.91■■□□□ 1.26
CYSTM1-204ENST00000509789 EEA1Q15075 1411 aa22.91■■□□□ 1.26
CYSTM1-204ENST00000509789 RUSC2Q8N2Y8 1516 aa22.9■■□□□ 1.26
CYSTM1-204ENST00000509789 CSRNP3Q8WYN3 585 aa22.85■■□□□ 1.25
CYSTM1-204ENST00000509789 ABCA5Q8WWZ7 1642 aa22.85■■□□□ 1.25
CYSTM1-204ENST00000509789 PLPPR3Q6T4P5 718 aa22.84■■□□□ 1.25
CYSTM1-204ENST00000509789 GRIN2BQ13224 1484 aa22.83■■□□□ 1.25
CYSTM1-204ENST00000509789 EIF4G3O43432 1585 aaKnown RBP22.83■■□□□ 1.25
CYSTM1-204ENST00000509789 IGF1RP08069 1367 aa22.82■■□□□ 1.24
CYSTM1-204ENST00000509789 ERICH3Q5RHP9 1530 aa22.77■■□□□ 1.24
CYSTM1-204ENST00000509789 PIAS4Q8N2W9 510 aaPredicted RBP22.76■■□□□ 1.23
CYSTM1-204ENST00000509789 PBRM1Q86U86 1689 aa22.72■■□□□ 1.23
CYSTM1-204ENST00000509789 CARMIL1Q5VZK9 1371 aa22.71■■□□□ 1.23
CYSTM1-204ENST00000509789 SNAPC4Q5SXM2 1469 aa22.69■■□□□ 1.22
CYSTM1-204ENST00000509789 MAGI1Q96QZ7 1491 aaPredicted RBP22.69■■□□□ 1.22
CYSTM1-204ENST00000509789 FHAD1B1AJZ9 1412 aa22.66■■□□□ 1.22
CYSTM1-204ENST00000509789 PPP6R1Q9UPN7 881 aa22.66■■□□□ 1.22
CYSTM1-204ENST00000509789 CUL7Q14999 1698 aa22.65■■□□□ 1.22
CYSTM1-204ENST00000509789 CHMP7Q8WUX9 453 aaPredicted RBP22.64■■□□□ 1.21
CYSTM1-204ENST00000509789 PRXQ9BXM0 1461 aa22.64■■□□□ 1.21
CYSTM1-204ENST00000509789 FBLN2P98095 1184 aa22.62■■□□□ 1.21
CYSTM1-204ENST00000509789 RAPGEF2Q9Y4G8 1499 aa22.6■■□□□ 1.21
CYSTM1-204ENST00000509789 ADAMTS12P58397 1594 aa22.6■■□□□ 1.21
CYSTM1-204ENST00000509789 SYNJ2O15056 1496 aa22.6■■□□□ 1.21
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