RNA–Protein interactions for RNA: ENST00000580947.1

SUPT4H1-204, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 4 BASIC

Gene SUPT4H1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-204ENST00000580947 NISCHQ9Y2I1 1504 aa26.47■■□□□ 1.83
SUPT4H1-204ENST00000580947 CCDC180Q9P1Z9 1646 aa23.72■■□□□ 1.39
SUPT4H1-204ENST00000580947 ABCC9O60706 1549 aa23.31■■□□□ 1.32
SUPT4H1-204ENST00000580947 RB1CC1Q8TDY2 1594 aa22.35■■□□□ 1.17
SUPT4H1-204ENST00000580947 NACADO15069 1562 aa22.29■■□□□ 1.16
SUPT4H1-204ENST00000580947 MYO15BQ96JP2 1530 aa22.11■■□□□ 1.13
SUPT4H1-204ENST00000580947 UNC13AQ9UPW8 1703 aa22.03■■□□□ 1.12
SUPT4H1-204ENST00000580947 ZCCHC6Q5VYS8 1495 aaKnown RBP22.02■■□□□ 1.12
SUPT4H1-204ENST00000580947 DCAF8L2P0C7V8 631 aa21.98■■□□□ 1.11
SUPT4H1-204ENST00000580947 DCAF1Q9Y4B6 1507 aa21.92■■□□□ 1.1
SUPT4H1-204ENST00000580947 BICRAQ9NZM4 1560 aa21.78■■□□□ 1.08
SUPT4H1-204ENST00000580947 PABPN1Q86U42 306 aaKnown RBP eCLIP21.68■■□□□ 1.06
SUPT4H1-204ENST00000580947 DNAJC5BQ9UF47 199 aa21.64■■□□□ 1.05
SUPT4H1-204ENST00000580947 SCRIBQ14160 1630 aa21.55■■□□□ 1.04
SUPT4H1-204ENST00000580947 SHROOM4Q9ULL8 1493 aa21.45■■□□□ 1.03
SUPT4H1-204ENST00000580947 EIF4G1Q04637 1599 aaKnown RBP21.17■□□□□ 0.98
SUPT4H1-204ENST00000580947 CC2D2AQ9P2K1 1620 aa21.15■□□□□ 0.98
SUPT4H1-204ENST00000580947 CECR2Q9BXF3 1484 aa20.97■□□□□ 0.95
SUPT4H1-204ENST00000580947 SMARCA4P51532 1647 aa20.63■□□□□ 0.89
SUPT4H1-204ENST00000580947 NCAPD3P42695 1498 aa20.55■□□□□ 0.88
SUPT4H1-204ENST00000580947 ATAD2BQ9ULI0 1458 aa20.52■□□□□ 0.88
SUPT4H1-204ENST00000580947 BAZ1AQ9NRL2 1556 aaPredicted RBP20.51■□□□□ 0.87
SUPT4H1-204ENST00000580947 SMARCA2P51531 1590 aa20.48■□□□□ 0.87
SUPT4H1-204ENST00000580947 HMGXB3Q12766 1538 aa20.46■□□□□ 0.87
SUPT4H1-204ENST00000580947 PEG3Q9GZU2 1588 aa20.46■□□□□ 0.87
SUPT4H1-204ENST00000580947 MROH2BQ7Z745 1585 aa20.4■□□□□ 0.86
SUPT4H1-204ENST00000580947 BAZ1BQ9UIG0 1483 aaKnown RBP20.3■□□□□ 0.84
SUPT4H1-204ENST00000580947 WIZO95785 1651 aa20.19■□□□□ 0.82
SUPT4H1-204ENST00000580947 NESP48681 1621 aa20.14■□□□□ 0.81
SUPT4H1-204ENST00000580947 LAMC3Q9Y6N6 1575 aa20.07■□□□□ 0.8
SUPT4H1-204ENST00000580947 RSF1Q96T23 1441 aaPredicted RBP20.05■□□□□ 0.8
SUPT4H1-204ENST00000580947 ERCC6Q03468 1493 aa20.05■□□□□ 0.8
SUPT4H1-204ENST00000580947 CUX2O14529 1486 aa20■□□□□ 0.79
SUPT4H1-204ENST00000580947 KIF21AQ7Z4S6 1674 aa19.98■□□□□ 0.79
SUPT4H1-204ENST00000580947 THOC2Q8NI27 1593 aaKnown RBP19.96■□□□□ 0.79
SUPT4H1-204ENST00000580947 TOP2AP11388 1531 aaKnown RBP19.94■□□□□ 0.78
SUPT4H1-204ENST00000580947 CADPSQ9ULU8 1353 aa19.89■□□□□ 0.77
SUPT4H1-204ENST00000580947 PDS5BQ9NTI5 1447 aa19.85■□□□□ 0.77
SUPT4H1-204ENST00000580947 CFTRP13569 1480 aa19.77■□□□□ 0.76
SUPT4H1-204ENST00000580947 PRDM2Q13029 1718 aa19.75■□□□□ 0.75
SUPT4H1-204ENST00000580947 WDR62O43379 1518 aa19.71■□□□□ 0.75
SUPT4H1-204ENST00000580947 MRC2Q9UBG0 1479 aa19.71■□□□□ 0.75
SUPT4H1-204ENST00000580947 FANCD2Q9BXW9 1451 aa19.68■□□□□ 0.74
SUPT4H1-204ENST00000580947 CCDC88BA6NC98 1476 aa19.67■□□□□ 0.74
SUPT4H1-204ENST00000580947 CEP164Q9UPV0 1460 aa19.67■□□□□ 0.74
SUPT4H1-204ENST00000580947 DNAJC5Q9H3Z4 198 aa19.63■□□□□ 0.73
SUPT4H1-204ENST00000580947 URB2Q14146 1524 aaKnown RBP19.55■□□□□ 0.72
SUPT4H1-204ENST00000580947 TOPBP1Q92547 1522 aa19.37■□□□□ 0.69
SUPT4H1-204ENST00000580947 DNMBPQ6XZF7 1577 aa19.34■□□□□ 0.69
SUPT4H1-204ENST00000580947 ABCC8Q09428 1581 aa19.31■□□□□ 0.68
SUPT4H1-204ENST00000580947 IFT140Q96RY7 1462 aa19.28■□□□□ 0.68
SUPT4H1-204ENST00000580947 TARBP1Q13395 1621 aaKnown RBP19.25■□□□□ 0.67
SUPT4H1-204ENST00000580947 ZNF608Q9ULD9 1512 aaPredicted RBP19.25■□□□□ 0.67
SUPT4H1-204ENST00000580947 EIF4G3O43432 1585 aaKnown RBP19.2■□□□□ 0.66
SUPT4H1-204ENST00000580947 SUPT5HO00267 1087 aaKnown RBP19.2■□□□□ 0.66
SUPT4H1-204ENST00000580947 POLA1P09884 1462 aaPredicted RBP19.19■□□□□ 0.66
SUPT4H1-204ENST00000580947 CUX1P39880 1505 aa19.15■□□□□ 0.66
SUPT4H1-204ENST00000580947 FGD5Q6ZNL6 1462 aa19.09■□□□□ 0.65
SUPT4H1-204ENST00000580947 RAD54L2Q9Y4B4 1467 aa19.09■□□□□ 0.65
SUPT4H1-204ENST00000580947 WDR97A6NE52 1622 aa19.08■□□□□ 0.65
SUPT4H1-204ENST00000580947 AQRO60306 1485 aaKnown RBP eCLIP19.06■□□□□ 0.645e-8■■■■■ 32.2
SUPT4H1-204ENST00000580947 CHD1O14646 1710 aa19.05■□□□□ 0.64
SUPT4H1-204ENST00000580947 SOGA1O94964 1423 aa19.03■□□□□ 0.64
SUPT4H1-204ENST00000580947 OSCARQ8IYS5 282 aa19.02■□□□□ 0.64
SUPT4H1-204ENST00000580947 BIVM-ERCC5R4GMW8 1640 aa18.98■□□□□ 0.63
SUPT4H1-204ENST00000580947 TDRD9Q8NDG6 1382 aaKnown RBP18.96■□□□□ 0.63
SUPT4H1-204ENST00000580947 TOP2BQ02880 1626 aa18.94■□□□□ 0.62
SUPT4H1-204ENST00000580947 PBRM1Q86U86 1689 aa18.94■□□□□ 0.62
SUPT4H1-204ENST00000580947 SYNJ1O43426 1573 aa18.93■□□□□ 0.62
SUPT4H1-204ENST00000580947 ABCA5Q8WWZ7 1642 aa18.92■□□□□ 0.62
SUPT4H1-204ENST00000580947 ABCA10Q8WWZ4 1543 aa18.91■□□□□ 0.62
SUPT4H1-204ENST00000580947 RIMBP3CA6NJZ7 1639 aa18.9■□□□□ 0.62
SUPT4H1-204ENST00000580947 RIMBP3BA6NNM3 1639 aa18.9■□□□□ 0.62
SUPT4H1-204ENST00000580947 RIMBP3Q9UFD9 1639 aa18.9■□□□□ 0.62
SUPT4H1-204ENST00000580947 SNAPC4Q5SXM2 1469 aa18.9■□□□□ 0.62
SUPT4H1-204ENST00000580947 GRIN2BQ13224 1484 aa18.87■□□□□ 0.61
SUPT4H1-204ENST00000580947 WRNQ14191 1432 aaPredicted RBP eCLIP18.87■□□□□ 0.61
SUPT4H1-204ENST00000580947 MAGI1Q96QZ7 1491 aaPredicted RBP18.87■□□□□ 0.61
SUPT4H1-204ENST00000580947 GAPVD1Q14C86 1478 aa18.84■□□□□ 0.61
SUPT4H1-204ENST00000580947 ARHGEF11O15085 1522 aa18.84■□□□□ 0.61
SUPT4H1-204ENST00000580947 CLASP1Q7Z460 1538 aa18.8■□□□□ 0.6
SUPT4H1-204ENST00000580947 SYNJ2O15056 1496 aa18.79■□□□□ 0.6
SUPT4H1-204ENST00000580947 TRIM41Q8WV44 630 aa18.78■□□□□ 0.6
SUPT4H1-204ENST00000580947 FBLN2P98095 1184 aa18.75■□□□□ 0.59
SUPT4H1-204ENST00000580947 ADAMTS12P58397 1594 aa18.73■□□□□ 0.59
SUPT4H1-204ENST00000580947 CHMP7Q8WUX9 453 aaPredicted RBP18.69■□□□□ 0.58
SUPT4H1-204ENST00000580947 ARAP1Q96P48 1450 aa18.68■□□□□ 0.58
SUPT4H1-204ENST00000580947 ERICH3Q5RHP9 1530 aa18.68■□□□□ 0.58
SUPT4H1-204ENST00000580947 GRIN2AQ12879 1464 aa18.65■□□□□ 0.58
SUPT4H1-204ENST00000580947 CEP170Q5SW79 1584 aa18.62■□□□□ 0.57
SUPT4H1-204ENST00000580947 FHAD1B1AJZ9 1412 aa18.61■□□□□ 0.57
SUPT4H1-204ENST00000580947 NUP160Q12769 1436 aa18.6■□□□□ 0.57
SUPT4H1-204ENST00000580947 SHROOM2Q13796 1616 aa18.56■□□□□ 0.56
SUPT4H1-204ENST00000580947 CYB5RLQ6IPT4 315 aa18.55■□□□□ 0.56
SUPT4H1-204ENST00000580947 ERCC6L2Q5T890 1561 aa18.52■□□□□ 0.56
SUPT4H1-204ENST00000580947 CUL7Q14999 1698 aa18.49■□□□□ 0.55
SUPT4H1-204ENST00000580947 RUSC2Q8N2Y8 1516 aa18.48■□□□□ 0.55
SUPT4H1-204ENST00000580947 KIF27Q86VH2 1401 aa18.47■□□□□ 0.55
SUPT4H1-204ENST00000580947 IGF1RP08069 1367 aa18.45■□□□□ 0.54
SUPT4H1-204ENST00000580947 PRG4Q92954 1404 aaPredicted RBP18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms