RNA–Protein interactions for RNA: ENST00000463783.1

NCBP2-209, Transcript of nuclear cap binding protein subunit 2, humanhuman

TSL 1 (best)

Gene NCBP2, Length 4,161 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2-209ENST00000463783 NISCHQ9Y2I1 1504 aa18.89■□□□□ 0.62
NCBP2-209ENST00000463783 CCDC180Q9P1Z9 1646 aa16.95■□□□□ 0.3
NCBP2-209ENST00000463783 ZCCHC6Q5VYS8 1495 aaKnown RBP15.93■□□□□ 0.14
NCBP2-209ENST00000463783 DCAF1Q9Y4B6 1507 aa15.86■□□□□ 0.13
NCBP2-209ENST00000463783 UNC13AQ9UPW8 1703 aa15.83■□□□□ 0.12
NCBP2-209ENST00000463783 MYO15BQ96JP2 1530 aa15.81■□□□□ 0.12
NCBP2-209ENST00000463783 ABCC9O60706 1549 aa15.59■□□□□ 0.09
NCBP2-209ENST00000463783 NACADO15069 1562 aa15.54■□□□□ 0.08
NCBP2-209ENST00000463783 BICRAQ9NZM4 1560 aa15.43■□□□□ 0.06
NCBP2-209ENST00000463783 RB1CC1Q8TDY2 1594 aa15.38■□□□□ 0.05
NCBP2-209ENST00000463783 SCRIBQ14160 1630 aa15.11■□□□□ 0.01
NCBP2-209ENST00000463783 SHROOM4Q9ULL8 1493 aa15.01□□□□□ -0.01
NCBP2-209ENST00000463783 PEG3Q9GZU2 1588 aa14.79□□□□□ -0.04
NCBP2-209ENST00000463783 SMARCA4P51532 1647 aa14.7□□□□□ -0.06
NCBP2-209ENST00000463783 CECR2Q9BXF3 1484 aa14.65□□□□□ -0.06
NCBP2-209ENST00000463783 SUPT5HO00267 1087 aaKnown RBP14.65□□□□□ -0.06
NCBP2-209ENST00000463783 EIF4G1Q04637 1599 aaKnown RBP14.65□□□□□ -0.06
NCBP2-209ENST00000463783 MROH2BQ7Z745 1585 aa14.6□□□□□ -0.07
NCBP2-209ENST00000463783 WIZO95785 1651 aa14.55□□□□□ -0.08
NCBP2-209ENST00000463783 CC2D2AQ9P2K1 1620 aa14.52□□□□□ -0.09
NCBP2-209ENST00000463783 BAZ1AQ9NRL2 1556 aaPredicted RBP14.49□□□□□ -0.09
NCBP2-209ENST00000463783 HMGXB3Q12766 1538 aa14.42□□□□□ -0.1
NCBP2-209ENST00000463783 RSF1Q96T23 1441 aaPredicted RBP14.41□□□□□ -0.1
NCBP2-209ENST00000463783 PABPN1Q86U42 306 aaKnown RBP eCLIP14.36□□□□□ -0.11
NCBP2-209ENST00000463783 PRDM2Q13029 1718 aa14.36□□□□□ -0.11
NCBP2-209ENST00000463783 ATAD2BQ9ULI0 1458 aa14.34□□□□□ -0.11
NCBP2-209ENST00000463783 SMARCA2P51531 1590 aa14.34□□□□□ -0.11
NCBP2-209ENST00000463783 DCAF8L2P0C7V8 631 aa14.33□□□□□ -0.12
NCBP2-209ENST00000463783 NCAPD3P42695 1498 aa14.31□□□□□ -0.12
NCBP2-209ENST00000463783 CHIC1Q5VXU3 224 aa14.3□□□□□ -0.12
NCBP2-209ENST00000463783 TOP2AP11388 1531 aaKnown RBP14.3□□□□□ -0.12
NCBP2-209ENST00000463783 DNAJC5BQ9UF47 199 aa14.26□□□□□ -0.13
NCBP2-209ENST00000463783 KIF21AQ7Z4S6 1674 aa14.03□□□□□ -0.16
NCBP2-209ENST00000463783 CCDC88BA6NC98 1476 aa14.02□□□□□ -0.17
NCBP2-209ENST00000463783 LOC105371045A0A1W2PR82 267 aa14.02□□□□□ -0.17
NCBP2-209ENST00000463783 BAZ1BQ9UIG0 1483 aaKnown RBP14□□□□□ -0.17
NCBP2-209ENST00000463783 HRCP23327 699 aa13.97□□□□□ -0.17
NCBP2-209ENST00000463783 PCGF6Q9BYE7 350 aa13.97□□□□□ -0.17
NCBP2-209ENST00000463783 PPARGC1BQ86YN6 1023 aaKnown RBP13.95□□□□□ -0.18
NCBP2-209ENST00000463783 THOC2Q8NI27 1593 aaKnown RBP13.95□□□□□ -0.18
NCBP2-209ENST00000463783 LAMC3Q9Y6N6 1575 aa13.92□□□□□ -0.18
NCBP2-209ENST00000463783 CFTRP13569 1480 aa13.91□□□□□ -0.18
NCBP2-209ENST00000463783 WDR97A6NE52 1622 aa13.9□□□□□ -0.18
NCBP2-209ENST00000463783 BIVM-ERCC5R4GMW8 1640 aa13.86□□□□□ -0.19
NCBP2-209ENST00000463783 NESP48681 1621 aa13.85□□□□□ -0.19
NCBP2-209ENST00000463783 SYNJ1O43426 1573 aa13.74□□□□□ -0.21
NCBP2-209ENST00000463783 WDR62O43379 1518 aa13.73□□□□□ -0.21
NCBP2-209ENST00000463783 TARBP1Q13395 1621 aaKnown RBP13.72□□□□□ -0.21
NCBP2-209ENST00000463783 TOP2BQ02880 1626 aa13.69□□□□□ -0.22
NCBP2-209ENST00000463783 CUX1P39880 1505 aa13.69□□□□□ -0.22
NCBP2-209ENST00000463783 URB2Q14146 1524 aaKnown RBP13.68□□□□□ -0.22
NCBP2-209ENST00000463783 CADPSQ9ULU8 1353 aa13.66□□□□□ -0.22
NCBP2-209ENST00000463783 ABCC8Q09428 1581 aa13.63□□□□□ -0.23
NCBP2-209ENST00000463783 DNMBPQ6XZF7 1577 aa13.6□□□□□ -0.23
NCBP2-209ENST00000463783 ABCA5Q8WWZ7 1642 aa13.58□□□□□ -0.24
NCBP2-209ENST00000463783 EHMT2Q96KQ7 1210 aa13.58□□□□□ -0.24
NCBP2-209ENST00000463783 FAM9AQ8IZU1 332 aaPredicted RBP13.57□□□□□ -0.24
NCBP2-209ENST00000463783 CUX2O14529 1486 aa13.57□□□□□ -0.24
NCBP2-209ENST00000463783 FANCD2Q9BXW9 1451 aa13.56□□□□□ -0.24
NCBP2-209ENST00000463783 TOPBP1Q92547 1522 aa13.52□□□□□ -0.24
NCBP2-209ENST00000463783 TRIM26Q12899 539 aaPredicted RBP13.51□□□□□ -0.25
NCBP2-209ENST00000463783 PBRM1Q86U86 1689 aa13.51□□□□□ -0.25
NCBP2-209ENST00000463783 TRIM41Q8WV44 630 aa13.5□□□□□ -0.25
NCBP2-209ENST00000463783 MRC2Q9UBG0 1479 aa13.46□□□□□ -0.25
NCBP2-209ENST00000463783 CEP164Q9UPV0 1460 aa13.44□□□□□ -0.26
NCBP2-209ENST00000463783 POLA1P09884 1462 aaPredicted RBP13.43□□□□□ -0.26
NCBP2-209ENST00000463783 EIF4G3O43432 1585 aaKnown RBP13.41□□□□□ -0.26
NCBP2-209ENST00000463783 ABCA10Q8WWZ4 1543 aa13.37□□□□□ -0.27
NCBP2-209ENST00000463783 FGD5Q6ZNL6 1462 aa13.36□□□□□ -0.27
NCBP2-209ENST00000463783 PDS5BQ9NTI5 1447 aa13.36□□□□□ -0.27
NCBP2-209ENST00000463783 WRNQ14191 1432 aaPredicted RBP eCLIP13.3□□□□□ -0.28
NCBP2-209ENST00000463783 RUSC2Q8N2Y8 1516 aa13.3□□□□□ -0.28
NCBP2-209ENST00000463783 ZNF608Q9ULD9 1512 aaPredicted RBP13.29□□□□□ -0.28
NCBP2-209ENST00000463783 CHD1O14646 1710 aa13.28□□□□□ -0.28
NCBP2-209ENST00000463783 ADAMTS12P58397 1594 aa13.27□□□□□ -0.29
NCBP2-209ENST00000463783 RAD54L2Q9Y4B4 1467 aa13.27□□□□□ -0.29
NCBP2-209ENST00000463783 SHROOM2Q13796 1616 aa13.22□□□□□ -0.29
NCBP2-209ENST00000463783 ERICH3Q5RHP9 1530 aa13.21□□□□□ -0.29
NCBP2-209ENST00000463783 CUL7Q14999 1698 aa13.21□□□□□ -0.29
NCBP2-209ENST00000463783 IFT140Q96RY7 1462 aa13.2□□□□□ -0.3
NCBP2-209ENST00000463783 KIF21BO75037 1637 aa13.2□□□□□ -0.3
NCBP2-209ENST00000463783 CTTNBP2Q8WZ74 1663 aa13.19□□□□□ -0.3
NCBP2-209ENST00000463783 SOGA1O94964 1423 aa13.16□□□□□ -0.3
NCBP2-209ENST00000463783 CLASP1Q7Z460 1538 aa13.16□□□□□ -0.3
NCBP2-209ENST00000463783 LRRIQ1Q96JM4 1722 aa13.15□□□□□ -0.3
NCBP2-209ENST00000463783 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.15□□□□□ -0.3
NCBP2-209ENST00000463783 CEP170Q5SW79 1584 aa13.14□□□□□ -0.31
NCBP2-209ENST00000463783 PRXQ9BXM0 1461 aa13.14□□□□□ -0.31
NCBP2-209ENST00000463783 TTBK1Q5TCY1 1321 aaPredicted RBP13.13□□□□□ -0.31
NCBP2-209ENST00000463783 ERCC6Q03468 1493 aa13.11□□□□□ -0.31
NCBP2-209ENST00000463783 SCAF1Q9H7N4 1312 aaKnown RBP13.1□□□□□ -0.31
NCBP2-209ENST00000463783 SAMD9Q5K651 1589 aa13.06□□□□□ -0.32
NCBP2-209ENST00000463783 AQRO60306 1485 aaKnown RBP eCLIP13.04□□□□□ -0.326e-6■□□□□ 8.5
NCBP2-209ENST00000463783 IGF1RP08069 1367 aa13.03□□□□□ -0.32
NCBP2-209ENST00000463783 ZEB1P37275 1124 aaPredicted RBP13.03□□□□□ -0.32
NCBP2-209ENST00000463783 CEP162Q5TB80 1403 aa13.03□□□□□ -0.32
NCBP2-209ENST00000463783 GAPVD1Q14C86 1478 aa13.02□□□□□ -0.32
NCBP2-209ENST00000463783 MAGI1Q96QZ7 1491 aaPredicted RBP13.02□□□□□ -0.33
NCBP2-209ENST00000463783 NUP160Q12769 1436 aa13□□□□□ -0.33
NCBP2-209ENST00000463783 SNAPC4Q5SXM2 1469 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms