RNA–Protein interactions for RNA: ENST00000504227.5

CYSTM1-202, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 5

Gene CYSTM1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-202ENST00000504227 NISCHQ9Y2I1 1504 aa32.4■■■□□ 2.78
CYSTM1-202ENST00000504227 CCDC180Q9P1Z9 1646 aa28.5■■■□□ 2.15
CYSTM1-202ENST00000504227 ABCC9O60706 1549 aa27.45■■□□□ 1.98
CYSTM1-202ENST00000504227 ZCCHC6Q5VYS8 1495 aaKnown RBP27.07■■□□□ 1.92
CYSTM1-202ENST00000504227 DCAF8L2P0C7V8 631 aa27■■□□□ 1.91
CYSTM1-202ENST00000504227 DCAF1Q9Y4B6 1507 aa26.81■■□□□ 1.88
CYSTM1-202ENST00000504227 MYO15BQ96JP2 1530 aa26.72■■□□□ 1.87
CYSTM1-202ENST00000504227 NACADO15069 1562 aa26.71■■□□□ 1.87
CYSTM1-202ENST00000504227 RB1CC1Q8TDY2 1594 aa26.61■■□□□ 1.85
CYSTM1-202ENST00000504227 SCRIBQ14160 1630 aa26.09■■□□□ 1.77
CYSTM1-202ENST00000504227 SHROOM4Q9ULL8 1493 aa26.01■■□□□ 1.75
CYSTM1-202ENST00000504227 UNC13AQ9UPW8 1703 aa25.92■■□□□ 1.74
CYSTM1-202ENST00000504227 PABPN1Q86U42 306 aaKnown RBP eCLIP25.81■■□□□ 1.72
CYSTM1-202ENST00000504227 BICRAQ9NZM4 1560 aa25.74■■□□□ 1.71
CYSTM1-202ENST00000504227 CECR2Q9BXF3 1484 aa25.18■■□□□ 1.62
CYSTM1-202ENST00000504227 BAZ1AQ9NRL2 1556 aaPredicted RBP25.07■■□□□ 1.6
CYSTM1-202ENST00000504227 EIF4G1Q04637 1599 aaKnown RBP25.05■■□□□ 1.6
CYSTM1-202ENST00000504227 SMARCA4P51532 1647 aa24.99■■□□□ 1.59
CYSTM1-202ENST00000504227 MROH2BQ7Z745 1585 aa24.97■■□□□ 1.59
CYSTM1-202ENST00000504227 RSF1Q96T23 1441 aaPredicted RBP24.92■■□□□ 1.58
CYSTM1-202ENST00000504227 SUPT5HO00267 1087 aaKnown RBP24.81■■□□□ 1.56
CYSTM1-202ENST00000504227 CC2D2AQ9P2K1 1620 aa24.81■■□□□ 1.56
CYSTM1-202ENST00000504227 ATAD2BQ9ULI0 1458 aa24.76■■□□□ 1.55
CYSTM1-202ENST00000504227 SMARCA2P51531 1590 aa24.76■■□□□ 1.55
CYSTM1-202ENST00000504227 PEG3Q9GZU2 1588 aa24.72■■□□□ 1.55
CYSTM1-202ENST00000504227 DNAJC5BQ9UF47 199 aa24.72■■□□□ 1.55
CYSTM1-202ENST00000504227 WIZO95785 1651 aa24.71■■□□□ 1.55
CYSTM1-202ENST00000504227 NCAPD3P42695 1498 aa24.67■■□□□ 1.54
CYSTM1-202ENST00000504227 BAZ1BQ9UIG0 1483 aaKnown RBP24.59■■□□□ 1.53
CYSTM1-202ENST00000504227 HMGXB3Q12766 1538 aa24.56■■□□□ 1.52
CYSTM1-202ENST00000504227 TOP2AP11388 1531 aaKnown RBP24.49■■□□□ 1.51
CYSTM1-202ENST00000504227 CCDC88BA6NC98 1476 aa24.24■■□□□ 1.47
CYSTM1-202ENST00000504227 CADPSQ9ULU8 1353 aa24.02■■□□□ 1.44
CYSTM1-202ENST00000504227 CFTRP13569 1480 aa23.95■■□□□ 1.42
CYSTM1-202ENST00000504227 LAMC3Q9Y6N6 1575 aa23.9■■□□□ 1.42
CYSTM1-202ENST00000504227 NESP48681 1621 aa23.89■■□□□ 1.42
CYSTM1-202ENST00000504227 PDS5BQ9NTI5 1447 aa23.79■■□□□ 1.4
CYSTM1-202ENST00000504227 FANCD2Q9BXW9 1451 aa23.71■■□□□ 1.39
CYSTM1-202ENST00000504227 PRDM2Q13029 1718 aa23.7■■□□□ 1.39
CYSTM1-202ENST00000504227 ERCC6Q03468 1493 aa23.64■■□□□ 1.38
CYSTM1-202ENST00000504227 CEP164Q9UPV0 1460 aa23.62■■□□□ 1.37
CYSTM1-202ENST00000504227 KIF21AQ7Z4S6 1674 aa23.57■■□□□ 1.36
CYSTM1-202ENST00000504227 WRNQ14191 1432 aaPredicted RBP eCLIP23.5■■□□□ 1.35
CYSTM1-202ENST00000504227 ABCC8Q09428 1581 aa23.48■■□□□ 1.35
CYSTM1-202ENST00000504227 MRC2Q9UBG0 1479 aa23.48■■□□□ 1.35
CYSTM1-202ENST00000504227 CHIC1Q5VXU3 224 aa23.45■■□□□ 1.34
CYSTM1-202ENST00000504227 URB2Q14146 1524 aaKnown RBP23.41■■□□□ 1.34
CYSTM1-202ENST00000504227 TRIM41Q8WV44 630 aa23.4■■□□□ 1.34
CYSTM1-202ENST00000504227 CUX1P39880 1505 aa23.39■■□□□ 1.34
CYSTM1-202ENST00000504227 DNMBPQ6XZF7 1577 aa23.39■■□□□ 1.33
CYSTM1-202ENST00000504227 TOPBP1Q92547 1522 aa23.38■■□□□ 1.33
CYSTM1-202ENST00000504227 SYNJ1O43426 1573 aa23.34■■□□□ 1.33
CYSTM1-202ENST00000504227 THOC2Q8NI27 1593 aaKnown RBP23.34■■□□□ 1.33
CYSTM1-202ENST00000504227 WDR62O43379 1518 aa23.33■■□□□ 1.33
CYSTM1-202ENST00000504227 TOP2BQ02880 1626 aa23.33■■□□□ 1.32
CYSTM1-202ENST00000504227 BIVM-ERCC5R4GMW8 1640 aa23.29■■□□□ 1.32
CYSTM1-202ENST00000504227 FGD5Q6ZNL6 1462 aa23.24■■□□□ 1.31
CYSTM1-202ENST00000504227 POLA1P09884 1462 aaPredicted RBP23.21■■□□□ 1.31
CYSTM1-202ENST00000504227 SOGA1O94964 1423 aa23.18■■□□□ 1.3
CYSTM1-202ENST00000504227 CUX2O14529 1486 aa23.15■■□□□ 1.3
CYSTM1-202ENST00000504227 RAD54L2Q9Y4B4 1467 aa23.12■■□□□ 1.29
CYSTM1-202ENST00000504227 IFT140Q96RY7 1462 aa23.11■■□□□ 1.29
CYSTM1-202ENST00000504227 TARBP1Q13395 1621 aaKnown RBP23.04■■□□□ 1.28
CYSTM1-202ENST00000504227 ABCA10Q8WWZ4 1543 aa23.04■■□□□ 1.28
CYSTM1-202ENST00000504227 TDRD9Q8NDG6 1382 aaKnown RBP22.99■■□□□ 1.27
CYSTM1-202ENST00000504227 KIF27Q86VH2 1401 aa22.98■■□□□ 1.27
CYSTM1-202ENST00000504227 ZNF608Q9ULD9 1512 aaPredicted RBP22.94■■□□□ 1.26
CYSTM1-202ENST00000504227 WDR97A6NE52 1622 aa22.93■■□□□ 1.26
CYSTM1-202ENST00000504227 AQRO60306 1485 aaKnown RBP eCLIP22.92■■□□□ 1.26
CYSTM1-202ENST00000504227 FAM9AQ8IZU1 332 aaPredicted RBP22.92■■□□□ 1.26
CYSTM1-202ENST00000504227 GAPVD1Q14C86 1478 aa22.91■■□□□ 1.26
CYSTM1-202ENST00000504227 EEA1Q15075 1411 aa22.91■■□□□ 1.26
CYSTM1-202ENST00000504227 RUSC2Q8N2Y8 1516 aa22.9■■□□□ 1.26
CYSTM1-202ENST00000504227 CSRNP3Q8WYN3 585 aa22.85■■□□□ 1.25
CYSTM1-202ENST00000504227 ABCA5Q8WWZ7 1642 aa22.85■■□□□ 1.25
CYSTM1-202ENST00000504227 GRIN2BQ13224 1484 aa22.83■■□□□ 1.25
CYSTM1-202ENST00000504227 EIF4G3O43432 1585 aaKnown RBP22.83■■□□□ 1.25
CYSTM1-202ENST00000504227 IGF1RP08069 1367 aa22.82■■□□□ 1.24
CYSTM1-202ENST00000504227 ERICH3Q5RHP9 1530 aa22.77■■□□□ 1.24
CYSTM1-202ENST00000504227 PBRM1Q86U86 1689 aa22.72■■□□□ 1.23
CYSTM1-202ENST00000504227 CARMIL1Q5VZK9 1371 aa22.71■■□□□ 1.23
CYSTM1-202ENST00000504227 SNAPC4Q5SXM2 1469 aa22.69■■□□□ 1.22
CYSTM1-202ENST00000504227 MAGI1Q96QZ7 1491 aaPredicted RBP22.69■■□□□ 1.22
CYSTM1-202ENST00000504227 FHAD1B1AJZ9 1412 aa22.66■■□□□ 1.22
CYSTM1-202ENST00000504227 CUL7Q14999 1698 aa22.65■■□□□ 1.22
CYSTM1-202ENST00000504227 CHMP7Q8WUX9 453 aaPredicted RBP22.64■■□□□ 1.21
CYSTM1-202ENST00000504227 PRXQ9BXM0 1461 aa22.64■■□□□ 1.21
CYSTM1-202ENST00000504227 FBLN2P98095 1184 aa22.62■■□□□ 1.21
CYSTM1-202ENST00000504227 RAPGEF2Q9Y4G8 1499 aa22.6■■□□□ 1.21
CYSTM1-202ENST00000504227 ADAMTS12P58397 1594 aa22.6■■□□□ 1.21
CYSTM1-202ENST00000504227 SYNJ2O15056 1496 aa22.6■■□□□ 1.21
CYSTM1-202ENST00000504227 EHMT2Q96KQ7 1210 aa22.57■■□□□ 1.2
CYSTM1-202ENST00000504227 KIF21BO75037 1637 aa22.55■■□□□ 1.2
CYSTM1-202ENST00000504227 GOLGA3Q08378 1498 aa22.53■■□□□ 1.2
CYSTM1-202ENST00000504227 UBTFP17480 764 aaKnown RBP22.52■■□□□ 1.2
CYSTM1-202ENST00000504227 LOC105371045A0A1W2PR82 267 aa22.51■■□□□ 1.19
CYSTM1-202ENST00000504227 GRIN2AQ12879 1464 aa22.5■■□□□ 1.19
CYSTM1-202ENST00000504227 CHD1O14646 1710 aa22.43■■□□□ 1.18
CYSTM1-202ENST00000504227 OSCARQ8IYS5 282 aa22.4■■□□□ 1.18
CYSTM1-202ENST00000504227 NUP160Q12769 1436 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms