RNA–Protein interactions for RNA: ENST00000509589.5

CYSTM1-203, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 3

Gene CYSTM1, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-203ENST00000509589 NISCHQ9Y2I1 1504 aa26.19■■□□□ 1.78
CYSTM1-203ENST00000509589 ABCC9O60706 1549 aa23.84■■□□□ 1.41
CYSTM1-203ENST00000509589 CCDC180Q9P1Z9 1646 aa23.55■■□□□ 1.36
CYSTM1-203ENST00000509589 DNAJC5BQ9UF47 199 aa22.6■■□□□ 1.21
CYSTM1-203ENST00000509589 RB1CC1Q8TDY2 1594 aa22.54■■□□□ 1.2
CYSTM1-203ENST00000509589 NACADO15069 1562 aa22.33■■□□□ 1.16
CYSTM1-203ENST00000509589 DCAF8L2P0C7V8 631 aa22.2■■□□□ 1.14
CYSTM1-203ENST00000509589 PABPN1Q86U42 306 aaKnown RBP eCLIP22.18■■□□□ 1.14
CYSTM1-203ENST00000509589 UNC13AQ9UPW8 1703 aa22.07■■□□□ 1.12
CYSTM1-203ENST00000509589 BICRAQ9NZM4 1560 aa21.95■■□□□ 1.11
CYSTM1-203ENST00000509589 MYO15BQ96JP2 1530 aa21.92■■□□□ 1.1
CYSTM1-203ENST00000509589 ZCCHC6Q5VYS8 1495 aaKnown RBP21.68■■□□□ 1.06
CYSTM1-203ENST00000509589 DCAF1Q9Y4B6 1507 aa21.58■■□□□ 1.04
CYSTM1-203ENST00000509589 SHROOM4Q9ULL8 1493 aa21.54■■□□□ 1.04
CYSTM1-203ENST00000509589 SCRIBQ14160 1630 aa21.53■■□□□ 1.04
CYSTM1-203ENST00000509589 CC2D2AQ9P2K1 1620 aa21.51■■□□□ 1.03
CYSTM1-203ENST00000509589 CECR2Q9BXF3 1484 aa21.48■■□□□ 1.03
CYSTM1-203ENST00000509589 EIF4G1Q04637 1599 aaKnown RBP21.4■■□□□ 1.02
CYSTM1-203ENST00000509589 DNAJC5Q9H3Z4 198 aa20.83■□□□□ 0.93
CYSTM1-203ENST00000509589 NCAPD3P42695 1498 aa20.63■□□□□ 0.89
CYSTM1-203ENST00000509589 CUX2O14529 1486 aa20.58■□□□□ 0.89
CYSTM1-203ENST00000509589 ERCC6Q03468 1493 aa20.56■□□□□ 0.88
CYSTM1-203ENST00000509589 ATAD2BQ9ULI0 1458 aa20.56■□□□□ 0.88
CYSTM1-203ENST00000509589 SMARCA4P51532 1647 aa20.49■□□□□ 0.87
CYSTM1-203ENST00000509589 HMGXB3Q12766 1538 aa20.46■□□□□ 0.87
CYSTM1-203ENST00000509589 SMARCA2P51531 1590 aa20.46■□□□□ 0.87
CYSTM1-203ENST00000509589 NESP48681 1621 aa20.45■□□□□ 0.86
CYSTM1-203ENST00000509589 BAZ1BQ9UIG0 1483 aaKnown RBP20.34■□□□□ 0.85
CYSTM1-203ENST00000509589 BAZ1AQ9NRL2 1556 aaPredicted RBP20.32■□□□□ 0.84
CYSTM1-203ENST00000509589 PEG3Q9GZU2 1588 aa20.27■□□□□ 0.84
CYSTM1-203ENST00000509589 THOC2Q8NI27 1593 aaKnown RBP20.25■□□□□ 0.83
CYSTM1-203ENST00000509589 MROH2BQ7Z745 1585 aa20.22■□□□□ 0.83
CYSTM1-203ENST00000509589 LAMC3Q9Y6N6 1575 aa20.18■□□□□ 0.82
CYSTM1-203ENST00000509589 KIF21AQ7Z4S6 1674 aa20.14■□□□□ 0.81
CYSTM1-203ENST00000509589 PDS5BQ9NTI5 1447 aa20.06■□□□□ 0.8
CYSTM1-203ENST00000509589 CADPSQ9ULU8 1353 aa19.99■□□□□ 0.79
CYSTM1-203ENST00000509589 WIZO95785 1651 aa19.96■□□□□ 0.79
CYSTM1-203ENST00000509589 MRC2Q9UBG0 1479 aa19.94■□□□□ 0.78
CYSTM1-203ENST00000509589 WDR62O43379 1518 aa19.91■□□□□ 0.78
CYSTM1-203ENST00000509589 TRIM41Q8WV44 630 aa19.86■□□□□ 0.77
CYSTM1-203ENST00000509589 CEP164Q9UPV0 1460 aa19.81■□□□□ 0.76
CYSTM1-203ENST00000509589 FANCD2Q9BXW9 1451 aa19.79■□□□□ 0.76
CYSTM1-203ENST00000509589 CFTRP13569 1480 aa19.73■□□□□ 0.75
CYSTM1-203ENST00000509589 RSF1Q96T23 1441 aaPredicted RBP19.7■□□□□ 0.74
CYSTM1-203ENST00000509589 TOP2AP11388 1531 aaKnown RBP19.66■□□□□ 0.74
CYSTM1-203ENST00000509589 URB2Q14146 1524 aaKnown RBP19.66■□□□□ 0.74
CYSTM1-203ENST00000509589 OSCARQ8IYS5 282 aa19.59■□□□□ 0.73
CYSTM1-203ENST00000509589 PRDM2Q13029 1718 aa19.49■□□□□ 0.71
CYSTM1-203ENST00000509589 ZNF608Q9ULD9 1512 aaPredicted RBP19.47■□□□□ 0.71
CYSTM1-203ENST00000509589 CCDC88BA6NC98 1476 aa19.46■□□□□ 0.71
CYSTM1-203ENST00000509589 RIMBP3CA6NJZ7 1639 aa19.42■□□□□ 0.7
CYSTM1-203ENST00000509589 RIMBP3BA6NNM3 1639 aa19.42■□□□□ 0.7
CYSTM1-203ENST00000509589 RIMBP3Q9UFD9 1639 aa19.42■□□□□ 0.7
CYSTM1-203ENST00000509589 IFT140Q96RY7 1462 aa19.41■□□□□ 0.7
CYSTM1-203ENST00000509589 TOPBP1Q92547 1522 aa19.4■□□□□ 0.7
CYSTM1-203ENST00000509589 EIF4G3O43432 1585 aaKnown RBP19.33■□□□□ 0.69
CYSTM1-203ENST00000509589 ARHGEF11O15085 1522 aa19.33■□□□□ 0.68
CYSTM1-203ENST00000509589 DNMBPQ6XZF7 1577 aa19.28■□□□□ 0.68
CYSTM1-203ENST00000509589 ABCC8Q09428 1581 aa19.26■□□□□ 0.67
CYSTM1-203ENST00000509589 AQRO60306 1485 aaKnown RBP eCLIP19.24■□□□□ 0.67
CYSTM1-203ENST00000509589 TARBP1Q13395 1621 aaKnown RBP19.24■□□□□ 0.67
CYSTM1-203ENST00000509589 CHD1O14646 1710 aa19.22■□□□□ 0.67
CYSTM1-203ENST00000509589 CYB5RLQ6IPT4 315 aa19.19■□□□□ 0.66
CYSTM1-203ENST00000509589 POLA1P09884 1462 aaPredicted RBP19.19■□□□□ 0.66
CYSTM1-203ENST00000509589 ARAP1Q96P48 1450 aa19.15■□□□□ 0.66
CYSTM1-203ENST00000509589 RAD54L2Q9Y4B4 1467 aa19.15■□□□□ 0.66
CYSTM1-203ENST00000509589 FBLN2P98095 1184 aa19.14■□□□□ 0.65
CYSTM1-203ENST00000509589 TDRD9Q8NDG6 1382 aaKnown RBP19.1■□□□□ 0.65
CYSTM1-203ENST00000509589 SOGA1O94964 1423 aa19.08■□□□□ 0.64
CYSTM1-203ENST00000509589 SNAPC4Q5SXM2 1469 aa19.04■□□□□ 0.64
CYSTM1-203ENST00000509589 FGD5Q6ZNL6 1462 aa19.03■□□□□ 0.64
CYSTM1-203ENST00000509589 TRHP20396 242 aaPredicted RBP19.03■□□□□ 0.64
CYSTM1-203ENST00000509589 CUX1P39880 1505 aa19■□□□□ 0.63
CYSTM1-203ENST00000509589 CLASP1Q7Z460 1538 aa19■□□□□ 0.63
CYSTM1-203ENST00000509589 WDR97A6NE52 1622 aa18.96■□□□□ 0.63
CYSTM1-203ENST00000509589 CHMP7Q8WUX9 453 aaPredicted RBP18.94■□□□□ 0.62
CYSTM1-203ENST00000509589 MAGI1Q96QZ7 1491 aaPredicted RBP18.94■□□□□ 0.62
CYSTM1-203ENST00000509589 GRIN2BQ13224 1484 aa18.93■□□□□ 0.62
CYSTM1-203ENST00000509589 SYNJ1O43426 1573 aa18.93■□□□□ 0.62
CYSTM1-203ENST00000509589 SYNJ2O15056 1496 aa18.9■□□□□ 0.62
CYSTM1-203ENST00000509589 PBRM1Q86U86 1689 aa18.85■□□□□ 0.61
CYSTM1-203ENST00000509589 GAPVD1Q14C86 1478 aa18.84■□□□□ 0.61
CYSTM1-203ENST00000509589 ABCA5Q8WWZ7 1642 aa18.8■□□□□ 0.6
CYSTM1-203ENST00000509589 ABCA10Q8WWZ4 1543 aa18.79■□□□□ 0.6
CYSTM1-203ENST00000509589 ERCC6L2Q5T890 1561 aa18.73■□□□□ 0.59
CYSTM1-203ENST00000509589 GRIN2AQ12879 1464 aa18.7■□□□□ 0.58
CYSTM1-203ENST00000509589 SUPT5HO00267 1087 aaKnown RBP18.69■□□□□ 0.58
CYSTM1-203ENST00000509589 ADAMTS12P58397 1594 aa18.68■□□□□ 0.58
CYSTM1-203ENST00000509589 CEP170Q5SW79 1584 aa18.68■□□□□ 0.58
CYSTM1-203ENST00000509589 WRNQ14191 1432 aaPredicted RBP eCLIP18.66■□□□□ 0.58
CYSTM1-203ENST00000509589 NUP160Q12769 1436 aa18.65■□□□□ 0.58
CYSTM1-203ENST00000509589 BIVM-ERCC5R4GMW8 1640 aa18.61■□□□□ 0.57
CYSTM1-203ENST00000509589 TOP2BQ02880 1626 aa18.6■□□□□ 0.57
CYSTM1-203ENST00000509589 AEBP2Q6ZN18 517 aaPredicted RBP18.6■□□□□ 0.57
CYSTM1-203ENST00000509589 SHROOM2Q13796 1616 aa18.59■□□□□ 0.57
CYSTM1-203ENST00000509589 FHAD1B1AJZ9 1412 aa18.58■□□□□ 0.57
CYSTM1-203ENST00000509589 ERICH3Q5RHP9 1530 aa18.53■□□□□ 0.56
CYSTM1-203ENST00000509589 PRG4Q92954 1404 aaPredicted RBP18.49■□□□□ 0.55
CYSTM1-203ENST00000509589 KIF13AQ9H1H9 1805 aa18.46■□□□□ 0.55
CYSTM1-203ENST00000509589 JPH4Q96JJ6 628 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms