RNA–Protein interactions for RNA: ENST00000572176.1

ATP2A3-211, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 2

Gene ATP2A3, Length 428 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-211ENST00000572176 NISCHQ9Y2I1 1504 aa32.32■■■□□ 2.76
ATP2A3-211ENST00000572176 CCDC180Q9P1Z9 1646 aa29.01■■■□□ 2.23
ATP2A3-211ENST00000572176 ABCC9O60706 1549 aa28.83■■■□□ 2.21
ATP2A3-211ENST00000572176 RB1CC1Q8TDY2 1594 aa27.52■■■□□ 2
ATP2A3-211ENST00000572176 NACADO15069 1562 aa27.37■■□□□ 1.97
ATP2A3-211ENST00000572176 DCAF8L2P0C7V8 631 aa27.07■■□□□ 1.92
ATP2A3-211ENST00000572176 MYO15BQ96JP2 1530 aa27.06■■□□□ 1.92
ATP2A3-211ENST00000572176 DNAJC5BQ9UF47 199 aa26.92■■□□□ 1.9
ATP2A3-211ENST00000572176 UNC13AQ9UPW8 1703 aa26.92■■□□□ 1.9
ATP2A3-211ENST00000572176 ZCCHC6Q5VYS8 1495 aaKnown RBP26.85■■□□□ 1.89
ATP2A3-211ENST00000572176 PABPN1Q86U42 306 aaKnown RBP eCLIP26.8■■□□□ 1.88
ATP2A3-211ENST00000572176 DCAF1Q9Y4B6 1507 aa26.75■■□□□ 1.87
ATP2A3-211ENST00000572176 BICRAQ9NZM4 1560 aa26.74■■□□□ 1.87
ATP2A3-211ENST00000572176 SHROOM4Q9ULL8 1493 aa26.43■■□□□ 1.82
ATP2A3-211ENST00000572176 SCRIBQ14160 1630 aa26.39■■□□□ 1.81
ATP2A3-211ENST00000572176 CC2D2AQ9P2K1 1620 aa26.08■■□□□ 1.77
ATP2A3-211ENST00000572176 EIF4G1Q04637 1599 aaKnown RBP26.07■■□□□ 1.76
ATP2A3-211ENST00000572176 CECR2Q9BXF3 1484 aa25.98■■□□□ 1.75
ATP2A3-211ENST00000572176 NCAPD3P42695 1498 aa25.26■■□□□ 1.63
ATP2A3-211ENST00000572176 SMARCA4P51532 1647 aa25.21■■□□□ 1.63
ATP2A3-211ENST00000572176 ATAD2BQ9ULI0 1458 aa25.2■■□□□ 1.62
ATP2A3-211ENST00000572176 SMARCA2P51531 1590 aa25.14■■□□□ 1.61
ATP2A3-211ENST00000572176 HMGXB3Q12766 1538 aa25.12■■□□□ 1.61
ATP2A3-211ENST00000572176 BAZ1AQ9NRL2 1556 aaPredicted RBP25.1■■□□□ 1.61
ATP2A3-211ENST00000572176 PEG3Q9GZU2 1588 aa25■■□□□ 1.59
ATP2A3-211ENST00000572176 BAZ1BQ9UIG0 1483 aaKnown RBP24.95■■□□□ 1.58
ATP2A3-211ENST00000572176 MROH2BQ7Z745 1585 aa24.9■■□□□ 1.58
ATP2A3-211ENST00000572176 ERCC6Q03468 1493 aa24.88■■□□□ 1.57
ATP2A3-211ENST00000572176 CUX2O14529 1486 aa24.85■■□□□ 1.57
ATP2A3-211ENST00000572176 NESP48681 1621 aa24.8■■□□□ 1.56
ATP2A3-211ENST00000572176 LAMC3Q9Y6N6 1575 aa24.68■■□□□ 1.54
ATP2A3-211ENST00000572176 DNAJC5Q9H3Z4 198 aa24.64■■□□□ 1.54
ATP2A3-211ENST00000572176 THOC2Q8NI27 1593 aaKnown RBP24.6■■□□□ 1.53
ATP2A3-211ENST00000572176 WIZO95785 1651 aa24.59■■□□□ 1.53
ATP2A3-211ENST00000572176 KIF21AQ7Z4S6 1674 aa24.52■■□□□ 1.52
ATP2A3-211ENST00000572176 PDS5BQ9NTI5 1447 aa24.5■■□□□ 1.51
ATP2A3-211ENST00000572176 CADPSQ9ULU8 1353 aa24.47■■□□□ 1.51
ATP2A3-211ENST00000572176 RSF1Q96T23 1441 aaPredicted RBP24.41■■□□□ 1.5
ATP2A3-211ENST00000572176 TOP2AP11388 1531 aaKnown RBP24.33■■□□□ 1.49
ATP2A3-211ENST00000572176 MRC2Q9UBG0 1479 aa24.31■■□□□ 1.48
ATP2A3-211ENST00000572176 WDR62O43379 1518 aa24.28■■□□□ 1.48
ATP2A3-211ENST00000572176 CFTRP13569 1480 aa24.24■■□□□ 1.47
ATP2A3-211ENST00000572176 CEP164Q9UPV0 1460 aa24.23■■□□□ 1.47
ATP2A3-211ENST00000572176 FANCD2Q9BXW9 1451 aa24.2■■□□□ 1.47
ATP2A3-211ENST00000572176 PRDM2Q13029 1718 aa24.04■■□□□ 1.44
ATP2A3-211ENST00000572176 URB2Q14146 1524 aaKnown RBP24.01■■□□□ 1.43
ATP2A3-211ENST00000572176 CCDC88BA6NC98 1476 aa24■■□□□ 1.43
ATP2A3-211ENST00000572176 TOPBP1Q92547 1522 aa23.77■■□□□ 1.4
ATP2A3-211ENST00000572176 IFT140Q96RY7 1462 aa23.75■■□□□ 1.39
ATP2A3-211ENST00000572176 ABCC8Q09428 1581 aa23.71■■□□□ 1.39
ATP2A3-211ENST00000572176 DNMBPQ6XZF7 1577 aa23.7■■□□□ 1.38
ATP2A3-211ENST00000572176 ZNF608Q9ULD9 1512 aaPredicted RBP23.68■■□□□ 1.38
ATP2A3-211ENST00000572176 OSCARQ8IYS5 282 aa23.63■■□□□ 1.37
ATP2A3-211ENST00000572176 EIF4G3O43432 1585 aaKnown RBP23.59■■□□□ 1.37
ATP2A3-211ENST00000572176 TARBP1Q13395 1621 aaKnown RBP23.57■■□□□ 1.36
ATP2A3-211ENST00000572176 TRIM41Q8WV44 630 aa23.56■■□□□ 1.36
ATP2A3-211ENST00000572176 POLA1P09884 1462 aaPredicted RBP23.54■■□□□ 1.36
ATP2A3-211ENST00000572176 AQRO60306 1485 aaKnown RBP eCLIP23.45■■□□□ 1.341e-8■■■■■ 30.5
ATP2A3-211ENST00000572176 RAD54L2Q9Y4B4 1467 aa23.42■■□□□ 1.34
ATP2A3-211ENST00000572176 RIMBP3CA6NJZ7 1639 aa23.4■■□□□ 1.34
ATP2A3-211ENST00000572176 RIMBP3BA6NNM3 1639 aa23.4■■□□□ 1.34
ATP2A3-211ENST00000572176 RIMBP3Q9UFD9 1639 aa23.4■■□□□ 1.34
ATP2A3-211ENST00000572176 CUX1P39880 1505 aa23.39■■□□□ 1.34
ATP2A3-211ENST00000572176 FGD5Q6ZNL6 1462 aa23.39■■□□□ 1.34
ATP2A3-211ENST00000572176 SOGA1O94964 1423 aa23.38■■□□□ 1.33
ATP2A3-211ENST00000572176 CHD1O14646 1710 aa23.38■■□□□ 1.33
ATP2A3-211ENST00000572176 WDR97A6NE52 1622 aa23.37■■□□□ 1.33
ATP2A3-211ENST00000572176 ARHGEF11O15085 1522 aa23.34■■□□□ 1.33
ATP2A3-211ENST00000572176 TDRD9Q8NDG6 1382 aaKnown RBP23.31■■□□□ 1.32
ATP2A3-211ENST00000572176 SUPT5HO00267 1087 aaKnown RBP23.29■■□□□ 1.32
ATP2A3-211ENST00000572176 SNAPC4Q5SXM2 1469 aa23.25■■□□□ 1.31
ATP2A3-211ENST00000572176 MAGI1Q96QZ7 1491 aaPredicted RBP23.21■■□□□ 1.31
ATP2A3-211ENST00000572176 GRIN2BQ13224 1484 aa23.2■■□□□ 1.3
ATP2A3-211ENST00000572176 FBLN2P98095 1184 aa23.2■■□□□ 1.3
ATP2A3-211ENST00000572176 ABCA10Q8WWZ4 1543 aa23.15■■□□□ 1.3
ATP2A3-211ENST00000572176 PBRM1Q86U86 1689 aa23.15■■□□□ 1.3
ATP2A3-211ENST00000572176 CLASP1Q7Z460 1538 aa23.14■■□□□ 1.3
ATP2A3-211ENST00000572176 ABCA5Q8WWZ7 1642 aa23.13■■□□□ 1.29
ATP2A3-211ENST00000572176 SYNJ2O15056 1496 aa23.12■■□□□ 1.29
ATP2A3-211ENST00000572176 GAPVD1Q14C86 1478 aa23.12■■□□□ 1.29
ATP2A3-211ENST00000572176 ARAP1Q96P48 1450 aa23.12■■□□□ 1.29
ATP2A3-211ENST00000572176 SYNJ1O43426 1573 aa23.11■■□□□ 1.29
ATP2A3-211ENST00000572176 BIVM-ERCC5R4GMW8 1640 aa23.08■■□□□ 1.28
ATP2A3-211ENST00000572176 CHMP7Q8WUX9 453 aaPredicted RBP23.07■■□□□ 1.28
ATP2A3-211ENST00000572176 CYB5RLQ6IPT4 315 aa23.06■■□□□ 1.28
ATP2A3-211ENST00000572176 TOP2BQ02880 1626 aa23.06■■□□□ 1.28
ATP2A3-211ENST00000572176 WRNQ14191 1432 aaPredicted RBP eCLIP23.04■■□□□ 1.28
ATP2A3-211ENST00000572176 ADAMTS12P58397 1594 aa22.95■■□□□ 1.26
ATP2A3-211ENST00000572176 GRIN2AQ12879 1464 aa22.92■■□□□ 1.26
ATP2A3-211ENST00000572176 ERICH3Q5RHP9 1530 aa22.87■■□□□ 1.25
ATP2A3-211ENST00000572176 NUP160Q12769 1436 aa22.85■■□□□ 1.25
ATP2A3-211ENST00000572176 CEP170Q5SW79 1584 aa22.84■■□□□ 1.25
ATP2A3-211ENST00000572176 FHAD1B1AJZ9 1412 aa22.84■■□□□ 1.25
ATP2A3-211ENST00000572176 ERCC6L2Q5T890 1561 aa22.76■■□□□ 1.23
ATP2A3-211ENST00000572176 SHROOM2Q13796 1616 aa22.75■■□□□ 1.23
ATP2A3-211ENST00000572176 TRHP20396 242 aaPredicted RBP22.74■■□□□ 1.23
ATP2A3-211ENST00000572176 RUSC2Q8N2Y8 1516 aa22.63■■□□□ 1.21
ATP2A3-211ENST00000572176 KIF27Q86VH2 1401 aa22.57■■□□□ 1.2
ATP2A3-211ENST00000572176 PRG4Q92954 1404 aaPredicted RBP22.57■■□□□ 1.2
ATP2A3-211ENST00000572176 CUL7Q14999 1698 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 207.9 ms