Protein–RNA interactions for Protein: A6PVL3

KNCN, Kinocilin, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNCNA6PVL3 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
KNCNA6PVL3 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
KNCNA6PVL3 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
KNCNA6PVL3 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC13.49□□□□□ -0.25
KNCNA6PVL3 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
KNCNA6PVL3 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
KNCNA6PVL3 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
KNCNA6PVL3 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC13.48□□□□□ -0.25
KNCNA6PVL3 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
KNCNA6PVL3 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
KNCNA6PVL3 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
KNCNA6PVL3 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC13.48□□□□□ -0.25
KNCNA6PVL3 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
KNCNA6PVL3 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
KNCNA6PVL3 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC13.48□□□□□ -0.25
KNCNA6PVL3 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC13.48□□□□□ -0.25
KNCNA6PVL3 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC13.48□□□□□ -0.25
KNCNA6PVL3 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
KNCNA6PVL3 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC13.48□□□□□ -0.25
KNCNA6PVL3 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
KNCNA6PVL3 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC13.48□□□□□ -0.25
KNCNA6PVL3 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
KNCNA6PVL3 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
KNCNA6PVL3 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
KNCNA6PVL3 SAPCD2P2-201ENST00000431719 1174 ntBASIC13.48□□□□□ -0.25
KNCNA6PVL3 HLA-F-220ENST00000434407 884 ntBASIC13.48□□□□□ -0.25
KNCNA6PVL3 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC13.48□□□□□ -0.25
KNCNA6PVL3 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
KNCNA6PVL3 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
KNCNA6PVL3 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC13.48□□□□□ -0.25
KNCNA6PVL3 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC13.48□□□□□ -0.25
KNCNA6PVL3 TK1-205ENST00000590862 642 ntTSL 3 BASIC13.48□□□□□ -0.25
KNCNA6PVL3 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC13.48□□□□□ -0.25
KNCNA6PVL3 SPEG-225ENST00000617028 815 ntTSL 5 BASIC13.48□□□□□ -0.25
KNCNA6PVL3 HYMAI.1-201ENST00000620949 238 ntBASIC13.48□□□□□ -0.25
KNCNA6PVL3 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
KNCNA6PVL3 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC13.48□□□□□ -0.25
KNCNA6PVL3 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC13.48□□□□□ -0.25
KNCNA6PVL3 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC13.48□□□□□ -0.25
KNCNA6PVL3 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
KNCNA6PVL3 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
KNCNA6PVL3 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
KNCNA6PVL3 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC13.48□□□□□ -0.25
KNCNA6PVL3 NARF-204ENST00000390006 1766 ntTSL 2 BASIC13.48□□□□□ -0.25
KNCNA6PVL3 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
KNCNA6PVL3 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
KNCNA6PVL3 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
KNCNA6PVL3 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
KNCNA6PVL3 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC13.47□□□□□ -0.25
KNCNA6PVL3 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
KNCNA6PVL3 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
KNCNA6PVL3 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
KNCNA6PVL3 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
KNCNA6PVL3 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
KNCNA6PVL3 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
KNCNA6PVL3 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC13.47□□□□□ -0.25
KNCNA6PVL3 SP100-208ENST00000427101 1922 ntTSL 2 BASIC13.47□□□□□ -0.25
KNCNA6PVL3 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
KNCNA6PVL3 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC13.47□□□□□ -0.25
KNCNA6PVL3 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
KNCNA6PVL3 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
KNCNA6PVL3 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
KNCNA6PVL3 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
KNCNA6PVL3 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
KNCNA6PVL3 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC13.47□□□□□ -0.25
KNCNA6PVL3 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
KNCNA6PVL3 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC13.47□□□□□ -0.25
KNCNA6PVL3 NME3-204ENST00000563498 920 ntTSL 2 BASIC13.47□□□□□ -0.25
KNCNA6PVL3 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC13.47□□□□□ -0.25
KNCNA6PVL3 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC13.47□□□□□ -0.25
KNCNA6PVL3 AC087388.1-201ENST00000571370 1112 ntBASIC13.47□□□□□ -0.25
KNCNA6PVL3 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
KNCNA6PVL3 AC008687.5-201ENST00000593746 558 ntBASIC13.47□□□□□ -0.25
KNCNA6PVL3 AC083849.1-201ENST00000615227 514 ntBASIC13.47□□□□□ -0.25
KNCNA6PVL3 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
KNCNA6PVL3 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC13.47□□□□□ -0.25
KNCNA6PVL3 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC13.47□□□□□ -0.25
KNCNA6PVL3 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
KNCNA6PVL3 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
KNCNA6PVL3 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
KNCNA6PVL3 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC13.47□□□□□ -0.25
KNCNA6PVL3 LINC00602-201ENST00000629776 2065 ntBASIC13.47□□□□□ -0.25
KNCNA6PVL3 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
KNCNA6PVL3 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
KNCNA6PVL3 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
KNCNA6PVL3 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
KNCNA6PVL3 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
KNCNA6PVL3 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
KNCNA6PVL3 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC13.46□□□□□ -0.25
KNCNA6PVL3 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC13.46□□□□□ -0.25
KNCNA6PVL3 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
KNCNA6PVL3 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
KNCNA6PVL3 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
KNCNA6PVL3 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
KNCNA6PVL3 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
KNCNA6PVL3 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
KNCNA6PVL3 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
KNCNA6PVL3 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
KNCNA6PVL3 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
KNCNA6PVL3 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms