Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.38■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.37■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.37■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.37■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.37■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.37■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.37■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 KRT18P65-201ENST00000439811 1286 ntBASIC16.37■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.37■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.37■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.37■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.37■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.37■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.37■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 AC022898.2-201ENST00000616822 1312 ntBASIC16.37■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 Z83836.1-201ENST00000624605 1642 ntBASIC16.37■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 AC016734.2-201ENST00000624325 1377 ntBASIC16.37■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.37■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.36■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.36■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.36■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 TSPY12P-201ENST00000421279 868 ntBASIC16.36■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 TSSC2-201ENST00000450217 709 ntBASIC16.36■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 BX276092.5-203ENST00000456199 560 ntBASIC16.36■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.36■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.36■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.36■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.36■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.36■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 AL121672.3-201ENST00000608644 468 ntBASIC16.36■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.36■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 AP000997.3-201ENST00000623333 2250 ntBASIC16.36■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.36■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TNFSF12-TNFSF13A0A0A6YY99 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms