Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 KRT17P1-201ENST00000399211 1546 ntBASIC16.35■□□□□ 0.21
CROCCP3Q8IVE0 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.35■□□□□ 0.21
CROCCP3Q8IVE0 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CROCCP3Q8IVE0 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CROCCP3Q8IVE0 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CROCCP3Q8IVE0 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC16.34■□□□□ 0.21
CROCCP3Q8IVE0 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.34■□□□□ 0.21
CROCCP3Q8IVE0 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.34■□□□□ 0.21
CROCCP3Q8IVE0 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.34■□□□□ 0.21
CROCCP3Q8IVE0 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CROCCP3Q8IVE0 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.34■□□□□ 0.21
CROCCP3Q8IVE0 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CROCCP3Q8IVE0 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CROCCP3Q8IVE0 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.34■□□□□ 0.21
CROCCP3Q8IVE0 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CROCCP3Q8IVE0 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CROCCP3Q8IVE0 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CROCCP3Q8IVE0 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.34■□□□□ 0.21
CROCCP3Q8IVE0 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC16.34■□□□□ 0.21
CROCCP3Q8IVE0 AL512625.2-201ENST00000417533 625 ntBASIC16.34■□□□□ 0.21
CROCCP3Q8IVE0 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CROCCP3Q8IVE0 AL121906.2-201ENST00000621597 723 ntBASIC16.34■□□□□ 0.21
CROCCP3Q8IVE0 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CROCCP3Q8IVE0 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CROCCP3Q8IVE0 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.34■□□□□ 0.21
CROCCP3Q8IVE0 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.34■□□□□ 0.21
CROCCP3Q8IVE0 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CROCCP3Q8IVE0 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
CROCCP3Q8IVE0 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CROCCP3Q8IVE0 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC16.34■□□□□ 0.21
CROCCP3Q8IVE0 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CROCCP3Q8IVE0 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CROCCP3Q8IVE0 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CROCCP3Q8IVE0 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CROCCP3Q8IVE0 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.33■□□□□ 0.21
CROCCP3Q8IVE0 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
CROCCP3Q8IVE0 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CROCCP3Q8IVE0 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.33■□□□□ 0.21
CROCCP3Q8IVE0 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.33■□□□□ 0.21
CROCCP3Q8IVE0 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
CROCCP3Q8IVE0 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
CROCCP3Q8IVE0 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CROCCP3Q8IVE0 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CROCCP3Q8IVE0 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CROCCP3Q8IVE0 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC16.33■□□□□ 0.2
CROCCP3Q8IVE0 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CROCCP3Q8IVE0 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CROCCP3Q8IVE0 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC16.33■□□□□ 0.2
CROCCP3Q8IVE0 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC16.33■□□□□ 0.2
CROCCP3Q8IVE0 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CROCCP3Q8IVE0 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CROCCP3Q8IVE0 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CROCCP3Q8IVE0 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CROCCP3Q8IVE0 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CROCCP3Q8IVE0 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CROCCP3Q8IVE0 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CROCCP3Q8IVE0 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CROCCP3Q8IVE0 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.33■□□□□ 0.2
CROCCP3Q8IVE0 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CROCCP3Q8IVE0 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.33■□□□□ 0.2
CROCCP3Q8IVE0 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CROCCP3Q8IVE0 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.32■□□□□ 0.2
CROCCP3Q8IVE0 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CROCCP3Q8IVE0 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CROCCP3Q8IVE0 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
CROCCP3Q8IVE0 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CROCCP3Q8IVE0 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CROCCP3Q8IVE0 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CROCCP3Q8IVE0 LYSMD4-203ENST00000378904 2122 ntBASIC16.32■□□□□ 0.2
CROCCP3Q8IVE0 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CROCCP3Q8IVE0 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CROCCP3Q8IVE0 LSM12P1-201ENST00000411836 588 ntBASIC16.32■□□□□ 0.2
CROCCP3Q8IVE0 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.32■□□□□ 0.2
CROCCP3Q8IVE0 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC16.32■□□□□ 0.2
CROCCP3Q8IVE0 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.32■□□□□ 0.2
CROCCP3Q8IVE0 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.32■□□□□ 0.2
CROCCP3Q8IVE0 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CROCCP3Q8IVE0 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC16.32■□□□□ 0.2
CROCCP3Q8IVE0 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CROCCP3Q8IVE0 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.32■□□□□ 0.2
CROCCP3Q8IVE0 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
CROCCP3Q8IVE0 DBI-210ENST00000542275 757 ntTSL 5 BASIC16.32■□□□□ 0.2
CROCCP3Q8IVE0 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.32■□□□□ 0.2
CROCCP3Q8IVE0 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.32■□□□□ 0.2
CROCCP3Q8IVE0 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC16.32■□□□□ 0.2
CROCCP3Q8IVE0 AL499627.1-201ENST00000569373 2188 ntBASIC16.32■□□□□ 0.2
CROCCP3Q8IVE0 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
CROCCP3Q8IVE0 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC16.32■□□□□ 0.2
CROCCP3Q8IVE0 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.32■□□□□ 0.2
CROCCP3Q8IVE0 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC16.32■□□□□ 0.2
CROCCP3Q8IVE0 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CROCCP3Q8IVE0 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CROCCP3Q8IVE0 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CROCCP3Q8IVE0 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CROCCP3Q8IVE0 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.31■□□□□ 0.2
CROCCP3Q8IVE0 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CROCCP3Q8IVE0 AL513523.2-202ENST00000427283 2040 ntBASIC16.31■□□□□ 0.2
CROCCP3Q8IVE0 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.31■□□□□ 0.2
CROCCP3Q8IVE0 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.31■□□□□ 0.2
CROCCP3Q8IVE0 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms