Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.76■□□□□ 0.43
LIMK1P53667 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.76■□□□□ 0.43
LIMK1P53667 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.76■□□□□ 0.43
LIMK1P53667 AC005829.1-201ENST00000570002 483 ntBASIC17.76■□□□□ 0.43
LIMK1P53667 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.76■□□□□ 0.43
LIMK1P53667 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.76■□□□□ 0.43
LIMK1P53667 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LIMK1P53667 AC107918.4-202ENST00000641623 219 ntBASIC17.76■□□□□ 0.43
LIMK1P53667 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LIMK1P53667 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.76■□□□□ 0.43
LIMK1P53667 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.76■□□□□ 0.43
LIMK1P53667 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LIMK1P53667 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LIMK1P53667 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LIMK1P53667 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.76■□□□□ 0.43
LIMK1P53667 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
LIMK1P53667 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LIMK1P53667 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
LIMK1P53667 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LIMK1P53667 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LIMK1P53667 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
LIMK1P53667 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LIMK1P53667 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.75■□□□□ 0.43
LIMK1P53667 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LIMK1P53667 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
LIMK1P53667 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
LIMK1P53667 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LIMK1P53667 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.75■□□□□ 0.43
LIMK1P53667 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LIMK1P53667 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LIMK1P53667 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LIMK1P53667 CALY-203ENST00000368558 825 ntTSL 5 BASIC17.75■□□□□ 0.43
LIMK1P53667 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
LIMK1P53667 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LIMK1P53667 AL035633.1-201ENST00000406139 838 ntBASIC17.75■□□□□ 0.43
LIMK1P53667 AC023274.1-201ENST00000418278 595 ntBASIC17.75■□□□□ 0.43
LIMK1P53667 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
LIMK1P53667 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.75■□□□□ 0.43
LIMK1P53667 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LIMK1P53667 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.75■□□□□ 0.43
LIMK1P53667 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.75■□□□□ 0.43
LIMK1P53667 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.75■□□□□ 0.43
LIMK1P53667 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LIMK1P53667 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.75■□□□□ 0.43
LIMK1P53667 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LIMK1P53667 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LIMK1P53667 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LIMK1P53667 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
LIMK1P53667 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
LIMK1P53667 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.75■□□□□ 0.43
LIMK1P53667 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.75■□□□□ 0.43
LIMK1P53667 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LIMK1P53667 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
LIMK1P53667 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
LIMK1P53667 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LIMK1P53667 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LIMK1P53667 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LIMK1P53667 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LIMK1P53667 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
LIMK1P53667 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
LIMK1P53667 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
LIMK1P53667 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LIMK1P53667 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LIMK1P53667 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
LIMK1P53667 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LIMK1P53667 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LIMK1P53667 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LIMK1P53667 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.74■□□□□ 0.43
LIMK1P53667 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.74■□□□□ 0.43
LIMK1P53667 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.74■□□□□ 0.43
LIMK1P53667 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
LIMK1P53667 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LIMK1P53667 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
LIMK1P53667 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.74■□□□□ 0.43
LIMK1P53667 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.74■□□□□ 0.43
LIMK1P53667 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.74■□□□□ 0.43
LIMK1P53667 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.74■□□□□ 0.43
LIMK1P53667 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LIMK1P53667 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.74■□□□□ 0.43
LIMK1P53667 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.74■□□□□ 0.43
LIMK1P53667 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.74■□□□□ 0.43
LIMK1P53667 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.74■□□□□ 0.43
LIMK1P53667 AC011467.4-201ENST00000594891 528 ntBASIC17.74■□□□□ 0.43
LIMK1P53667 AL138831.2-201ENST00000606564 490 ntBASIC17.74■□□□□ 0.43
LIMK1P53667 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LIMK1P53667 AC009113.1-201ENST00000570267 2443 ntBASIC17.74■□□□□ 0.43
LIMK1P53667 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
LIMK1P53667 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LIMK1P53667 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
LIMK1P53667 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LIMK1P53667 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LIMK1P53667 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.74■□□□□ 0.43
LIMK1P53667 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
LIMK1P53667 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
LIMK1P53667 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.73■□□□□ 0.43
LIMK1P53667 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
LIMK1P53667 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.73■□□□□ 0.43
LIMK1P53667 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
LIMK1P53667 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.73■□□□□ 0.43
LIMK1P53667 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms