Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN5O00501 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN5O00501 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CLDN5O00501 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.97■□□□□ 0.63
CLDN5O00501 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN5O00501 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.97■□□□□ 0.63
CLDN5O00501 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CLDN5O00501 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN5O00501 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN5O00501 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
CLDN5O00501 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN5O00501 TSPY19P-201ENST00000418461 509 ntBASIC18.97■□□□□ 0.63
CLDN5O00501 TSPY18P-201ENST00000441642 509 ntBASIC18.97■□□□□ 0.63
CLDN5O00501 DUTP2-201ENST00000519164 463 ntBASIC18.97■□□□□ 0.63
CLDN5O00501 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.97■□□□□ 0.63
CLDN5O00501 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.97■□□□□ 0.63
CLDN5O00501 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.97■□□□□ 0.63
CLDN5O00501 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN5O00501 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN5O00501 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.97■□□□□ 0.63
CLDN5O00501 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CLDN5O00501 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.97■□□□□ 0.63
CLDN5O00501 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN5O00501 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN5O00501 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN5O00501 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN5O00501 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN5O00501 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CLDN5O00501 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN5O00501 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.96■□□□□ 0.63
CLDN5O00501 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CLDN5O00501 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN5O00501 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN5O00501 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN5O00501 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN5O00501 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN5O00501 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN5O00501 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN5O00501 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CLDN5O00501 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.96■□□□□ 0.63
CLDN5O00501 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN5O00501 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN5O00501 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN5O00501 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN5O00501 KRT18P31-201ENST00000506277 1292 ntBASIC18.96■□□□□ 0.63
CLDN5O00501 AC096582.2-201ENST00000510860 516 ntBASIC18.96■□□□□ 0.63
CLDN5O00501 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN5O00501 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.96■□□□□ 0.63
CLDN5O00501 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN5O00501 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.96■□□□□ 0.63
CLDN5O00501 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN5O00501 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CLDN5O00501 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN5O00501 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN5O00501 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
CLDN5O00501 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.96■□□□□ 0.63
CLDN5O00501 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN5O00501 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.96■□□□□ 0.63
CLDN5O00501 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.96■□□□□ 0.63
CLDN5O00501 ABALON-201ENST00000629058 1903 ntBASIC18.96■□□□□ 0.63
CLDN5O00501 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CLDN5O00501 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.95■□□□□ 0.62
CLDN5O00501 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.95■□□□□ 0.62
CLDN5O00501 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.95■□□□□ 0.62
CLDN5O00501 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.95■□□□□ 0.62
CLDN5O00501 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN5O00501 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN5O00501 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CLDN5O00501 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CLDN5O00501 AC125634.1-201ENST00000438758 1403 ntBASIC18.95■□□□□ 0.62
CLDN5O00501 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN5O00501 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN5O00501 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CLDN5O00501 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.95■□□□□ 0.62
CLDN5O00501 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.95■□□□□ 0.62
CLDN5O00501 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.95■□□□□ 0.62
CLDN5O00501 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.95■□□□□ 0.62
CLDN5O00501 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.95■□□□□ 0.62
CLDN5O00501 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN5O00501 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CLDN5O00501 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN5O00501 AL138831.2-201ENST00000606564 490 ntBASIC18.95■□□□□ 0.62
CLDN5O00501 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN5O00501 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN5O00501 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN5O00501 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN5O00501 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN5O00501 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN5O00501 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN5O00501 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN5O00501 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CLDN5O00501 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.94■□□□□ 0.62
CLDN5O00501 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CLDN5O00501 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
CLDN5O00501 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CLDN5O00501 AC135050.7-201ENST00000624508 2218 ntBASIC18.94■□□□□ 0.62
CLDN5O00501 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.94■□□□□ 0.62
CLDN5O00501 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CLDN5O00501 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.94■□□□□ 0.62
CLDN5O00501 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms