Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 MCRIP2-210ENST00000620462 1594 ntTSL 518.25■□□□□ 0.511e-7■□□□□ 10.9
LARP4Q71RC2 MCRIP2-204ENST00000575894 1728 nt17.95■□□□□ 0.461e-7■□□□□ 10.9
LARP4Q71RC2 MCRIP2-209ENST00000619674 2306 ntTSL 217.68■□□□□ 0.421e-7■□□□□ 10.9
LARP4Q71RC2 MCRIP2-206ENST00000615744 1379 ntTSL 317.4■□□□□ 0.381e-7■□□□□ 10.9
LARP4Q71RC2 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.161e-7■□□□□ 10.9
LARP4Q71RC2 MCRIP2-205ENST00000611328 628 ntTSL 314.02□□□□□ -0.171e-7■□□□□ 10.9
LARP4Q71RC2 PLOD3-206ENST00000454310 1098 ntAPPRIS ALT2 TSL 515.43■□□□□ 0.061e-8■□□□□ 10.9
LARP4Q71RC2 PLOD3-201ENST00000223127 2920 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.341e-8■□□□□ 10.9
LARP4Q71RC2 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.49□□□□□ -0.092e-9■□□□□ 10.9
LARP4Q71RC2 CREB3L2-201ENST00000330387 7412 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.882e-9■□□□□ 10.9
LARP4Q71RC2 CREB3L2-207ENST00000616381 7133 ntTSL 5 BASIC8.87□□□□□ -0.992e-9■□□□□ 10.9
LARP4Q71RC2 PIGT-248ENST00000639783 1691 ntTSL 217.14■□□□□ 0.337e-10■□□□□ 10.9
LARP4Q71RC2 ATG9A-215ENST00000446716 5245 ntTSL 217.04■□□□□ 0.322e-8■□□□□ 10.9
LARP4Q71RC2 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.062e-8■□□□□ 10.9
LARP4Q71RC2 ATG9A-203ENST00000409033 3701 ntTSL 1 (best)12.29□□□□□ -0.442e-8■□□□□ 10.9
LARP4Q71RC2 ATG9A-202ENST00000396761 3799 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.72e-8■□□□□ 10.9
LARP4Q71RC2 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC6.61□□□□□ -1.355e-9■□□□□ 10.9
LARP4Q71RC2 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.445e-9■□□□□ 10.9
LARP4Q71RC2 CCL20-203ENST00000473642 680 ntTSL 26.05□□□□□ -1.445e-9■□□□□ 10.9
LARP4Q71RC2 SNRPB2-201ENST00000246071 2452 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.11e-6■□□□□ 10.9
LARP4Q71RC2 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.41e-6■□□□□ 10.9
LARP4Q71RC2 B2M-209ENST00000560556 472 ntTSL 36.54□□□□□ -1.362e-9■□□□□ 10.9
LARP4Q71RC2 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.571e-6■□□□□ 10.9
LARP4Q71RC2 PSMF1-204ENST00000381898 642 ntTSL 313.73□□□□□ -0.212e-9■□□□□ 10.9
LARP4Q71RC2 PSMF1-210ENST00000484891 4030 ntTSL 27.34□□□□□ -1.232e-9■□□□□ 10.9
LARP4Q71RC2 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.62■□□□□ 0.892e-8■□□□□ 10.9
LARP4Q71RC2 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.47■□□□□ 0.552e-8■□□□□ 10.9
LARP4Q71RC2 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.21■□□□□ 0.192e-8■□□□□ 10.9
LARP4Q71RC2 PRMT5-202ENST00000324366 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.382e-8■□□□□ 10.9
LARP4Q71RC2 PRMT5-207ENST00000476175 682 ntTSL 26.54□□□□□ -1.362e-8■□□□□ 10.9
LARP4Q71RC2 PRMT5-226ENST00000557443 337 ntTSL 35.69□□□□□ -1.52e-8■□□□□ 10.9
LARP4Q71RC2 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.029e-44■□□□□ 10.9
LARP4Q71RC2 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.131e-74■□□□□ 10.9
LARP4Q71RC2 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.23□□□□□ -0.131e-74■□□□□ 10.9
LARP4Q71RC2 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.171e-74■□□□□ 10.9
LARP4Q71RC2 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.411e-74■□□□□ 10.9
LARP4Q71RC2 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.441e-74■□□□□ 10.9
LARP4Q71RC2 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC24.93■■□□□ 1.583e-11■□□□□ 10.9
LARP4Q71RC2 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC24.93■■□□□ 1.583e-11■□□□□ 10.9
LARP4Q71RC2 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.323e-11■□□□□ 10.9
LARP4Q71RC2 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.113e-11■□□□□ 10.9
LARP4Q71RC2 ETFB-205ENST00000596253 575 ntTSL 313.83□□□□□ -0.23e-21■□□□□ 10.9
LARP4Q71RC2 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC24.53■■□□□ 1.523e-7■□□□□ 10.9
LARP4Q71RC2 HNRNPL-204ENST00000595443 2122 ntTSL 211.37□□□□□ -0.592e-37■□□□□ 10.9
LARP4Q71RC2 HNRNPL-205ENST00000595804 588 ntTSL 28.8□□□□□ -12e-37■□□□□ 10.9
LARP4Q71RC2 CAPN1-220ENST00000530567 1415 ntTSL 219.98■□□□□ 0.794e-7■□□□□ 10.9
LARP4Q71RC2 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.684e-7■□□□□ 10.9
LARP4Q71RC2 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.434e-7■□□□□ 10.9
LARP4Q71RC2 CAPN1-214ENST00000528165 2828 ntTSL 214.72□□□□□ -0.054e-7■□□□□ 10.9
LARP4Q71RC2 CAPN1-202ENST00000524773 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.34e-7■□□□□ 10.9
LARP4Q71RC2 CAPN1-208ENST00000527323 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.414e-7■□□□□ 10.9
LARP4Q71RC2 RPS11-207ENST00000601216 602 ntTSL 48.56□□□□□ -1.042e-27■□□□□ 10.9
LARP4Q71RC2 RPS11-203ENST00000596873 583 ntTSL 2 BASIC7.25□□□□□ -1.252e-27■□□□□ 10.9
LARP4Q71RC2 AARS-201ENST00000261772 3477 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.515e-10■□□□□ 10.9
LARP4Q71RC2 ERBB2-219ENST00000584601 4792 ntTSL 2 BASIC11.78□□□□□ -0.525e-10■□□□□ 10.9
LARP4Q71RC2 MRPS23-201ENST00000313608 5621 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.15e-19■□□□□ 10.9
LARP4Q71RC2 APOE-202ENST00000425718 923 ntTSL 1 (best)22.69■■□□□ 1.222e-32■□□□□ 10.9
LARP4Q71RC2 APOE-204ENST00000446996 737 ntTSL 220.44■□□□□ 0.862e-32■□□□□ 10.9
LARP4Q71RC2 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.222e-15■□□□□ 10.9
LARP4Q71RC2 EBPL-203ENST00000378270 579 ntTSL 2 BASIC26.09■■□□□ 1.776e-6■□□□□ 10.9
LARP4Q71RC2 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.356e-6■□□□□ 10.9
LARP4Q71RC2 EBPL-206ENST00000473576 810 ntTSL 223.47■■□□□ 1.356e-6■□□□□ 10.9
LARP4Q71RC2 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.28■■□□□ 16e-6■□□□□ 10.9
LARP4Q71RC2 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.02■□□□□ 0.86e-6■□□□□ 10.9
LARP4Q71RC2 EBPL-207ENST00000495963 1026 ntTSL 1 (best)20■□□□□ 0.796e-6■□□□□ 10.9
LARP4Q71RC2 CTBP1-205ENST00000504092 920 ntTSL 517.11■□□□□ 0.336e-6■□□□□ 10.9
LARP4Q71RC2 CTBP1-207ENST00000505826 657 ntTSL 516.07■□□□□ 0.166e-6■□□□□ 10.9
LARP4Q71RC2 CTBP1-216ENST00000514669 809 ntTSL 316.07■□□□□ 0.166e-6■□□□□ 10.9
LARP4Q71RC2 CTBP1-210ENST00000510739 774 ntTSL 314.53□□□□□ -0.086e-6■□□□□ 10.9
LARP4Q71RC2 CTBP1-206ENST00000504784 418 ntTSL 313.13□□□□□ -0.316e-6■□□□□ 10.9
LARP4Q71RC2 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC22.63■■□□□ 1.219e-12■□□□□ 10.9
LARP4Q71RC2 PRMT5-214ENST00000553915 1931 ntTSL 215.8■□□□□ 0.129e-12■□□□□ 10.9
LARP4Q71RC2 PRMT5-218ENST00000555454 771 ntTSL 57.14□□□□□ -1.279e-12■□□□□ 10.9
LARP4Q71RC2 PRMT5-206ENST00000454731 617 ntTSL 36.07□□□□□ -1.449e-12■□□□□ 10.9
LARP4Q71RC2 MICALL2-202ENST00000413446 3046 ntTSL 213.49□□□□□ -0.259e-7■□□□□ 10.8
LARP4Q71RC2 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC23.67■■□□□ 1.381e-6■□□□□ 10.8
LARP4Q71RC2 TMEM147-204ENST00000477168 986 ntTSL 218.36■□□□□ 0.531e-6■□□□□ 10.8
LARP4Q71RC2 TMEM147-207ENST00000595467 1783 ntTSL 217.6■□□□□ 0.411e-6■□□□□ 10.8
LARP4Q71RC2 TMEM147-205ENST00000593027 669 ntTSL 315.5■□□□□ 0.071e-6■□□□□ 10.8
LARP4Q71RC2 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.041e-6■□□□□ 10.8
LARP4Q71RC2 TMEM147-209ENST00000599895 1045 ntTSL 514.6□□□□□ -0.071e-6■□□□□ 10.8
LARP4Q71RC2 RABL6-205ENST00000435930 3328 ntTSL 214.89□□□□□ -0.034e-10■□□□□ 10.8
LARP4Q71RC2 MAT2A-201ENST00000306434 2819 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.914e-10■□□□□ 10.8
LARP4Q71RC2 DNAJA1-203ENST00000495015 604 ntTSL 37.15□□□□□ -1.264e-10■□□□□ 10.8
LARP4Q71RC2 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC7.14□□□□□ -1.271e-8■□□□□ 10.8
LARP4Q71RC2 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.98□□□□□ -1.611e-8■□□□□ 10.8
LARP4Q71RC2 LDHB-209ENST00000542765 672 ntTSL 24.84□□□□□ -1.638e-15■□□□□ 10.8
LARP4Q71RC2 DNAJA1-202ENST00000465677 505 ntTSL 24.31□□□□□ -1.724e-10■□□□□ 10.8
LARP4Q71RC2 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.61□□□□□ -1.831e-8■□□□□ 10.8
LARP4Q71RC2 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.6□□□□□ -1.831e-8■□□□□ 10.8
LARP4Q71RC2 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.3□□□□□ -1.881e-8■□□□□ 10.8
LARP4Q71RC2 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.15□□□□□ -1.911e-8■□□□□ 10.8
LARP4Q71RC2 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.941e-8■□□□□ 10.8
LARP4Q71RC2 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.59□□□□□ -1.991e-8■□□□□ 10.8
LARP4Q71RC2 GPX4-209ENST00000593032 583 ntTSL 317.32■□□□□ 0.361e-9■□□□□ 10.8
LARP4Q71RC2 PTK7-211ENST00000473339 870 ntTSL 314.73□□□□□ -0.053e-6■□□□□ 10.8
LARP4Q71RC2 HMGA1-206ENST00000478214 716 ntTSL 1 (best)14.27□□□□□ -0.132e-17■□□□□ 10.8
LARP4Q71RC2 APH1A-205ENST00000461320 1038 ntTSL 311.12□□□□□ -0.639e-7■□□□□ 10.8
LARP4Q71RC2 RPL29-208ENST00000492277 537 ntTSL 314.16□□□□□ -0.142e-15■□□□□ 10.8
LARP4Q71RC2 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.792e-15■□□□□ 10.8
Retrieved 100 of 15,922 protein–RNA pairs in 216.6 ms