RNA–Protein interactions for RNA: ENST00000473339.1

PTK7-211, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 3

Gene PTK7, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-211ENST00000473339 NISCHQ9Y2I1 1504 aa40.21■■■■■ 4.03
PTK7-211ENST00000473339 CCDC180Q9P1Z9 1646 aa35.77■■■■□ 3.32
PTK7-211ENST00000473339 ABCC9O60706 1549 aa35.41■■■■□ 3.26
PTK7-211ENST00000473339 RB1CC1Q8TDY2 1594 aa33.83■■■■□ 3.01
PTK7-211ENST00000473339 NACADO15069 1562 aa33.76■■■□□ 2.99
PTK7-211ENST00000473339 DCAF8L2P0C7V8 631 aa33.61■■■□□ 2.97
PTK7-211ENST00000473339 MYO15BQ96JP2 1530 aa33.52■■■□□ 2.96
PTK7-211ENST00000473339 ZCCHC6Q5VYS8 1495 aaKnown RBP33.43■■■□□ 2.94
PTK7-211ENST00000473339 DCAF1Q9Y4B6 1507 aa33.25■■■□□ 2.91
PTK7-211ENST00000473339 PABPN1Q86U42 306 aaKnown RBP eCLIP33.09■■■□□ 2.89
PTK7-211ENST00000473339 UNC13AQ9UPW8 1703 aa33.08■■■□□ 2.89
PTK7-211ENST00000473339 DNAJC5BQ9UF47 199 aa33.02■■■□□ 2.88
PTK7-211ENST00000473339 BICRAQ9NZM4 1560 aa32.99■■■□□ 2.87
PTK7-211ENST00000473339 SCRIBQ14160 1630 aa32.63■■■□□ 2.81
PTK7-211ENST00000473339 SHROOM4Q9ULL8 1493 aa32.48■■■□□ 2.79
PTK7-211ENST00000473339 EIF4G1Q04637 1599 aaKnown RBP32.07■■■□□ 2.72
PTK7-211ENST00000473339 CC2D2AQ9P2K1 1620 aa32■■■□□ 2.71
PTK7-211ENST00000473339 CECR2Q9BXF3 1484 aa31.85■■■□□ 2.69
PTK7-211ENST00000473339 NCAPD3P42695 1498 aa31.26■■■□□ 2.59
PTK7-211ENST00000473339 SMARCA4P51532 1647 aa31.21■■■□□ 2.59
PTK7-211ENST00000473339 ATAD2BQ9ULI0 1458 aa31.21■■■□□ 2.59
PTK7-211ENST00000473339 BAZ1AQ9NRL2 1556 aaPredicted RBP31.1■■■□□ 2.57
PTK7-211ENST00000473339 SMARCA2P51531 1590 aa31.04■■■□□ 2.56
PTK7-211ENST00000473339 MROH2BQ7Z745 1585 aa31■■■□□ 2.55
PTK7-211ENST00000473339 HMGXB3Q12766 1538 aa30.98■■■□□ 2.55
PTK7-211ENST00000473339 PEG3Q9GZU2 1588 aa30.98■■■□□ 2.55
PTK7-211ENST00000473339 BAZ1BQ9UIG0 1483 aaKnown RBP30.82■■■□□ 2.53
PTK7-211ENST00000473339 NESP48681 1621 aa30.6■■■□□ 2.49
PTK7-211ENST00000473339 WIZO95785 1651 aa30.58■■■□□ 2.49
PTK7-211ENST00000473339 RSF1Q96T23 1441 aaPredicted RBP30.56■■■□□ 2.48
PTK7-211ENST00000473339 ERCC6Q03468 1493 aa30.44■■■□□ 2.46
PTK7-211ENST00000473339 LAMC3Q9Y6N6 1575 aa30.37■■■□□ 2.45
PTK7-211ENST00000473339 CUX2O14529 1486 aa30.31■■■□□ 2.44
PTK7-211ENST00000473339 CADPSQ9ULU8 1353 aa30.29■■■□□ 2.44
PTK7-211ENST00000473339 TOP2AP11388 1531 aaKnown RBP30.23■■■□□ 2.43
PTK7-211ENST00000473339 PDS5BQ9NTI5 1447 aa30.18■■■□□ 2.42
PTK7-211ENST00000473339 THOC2Q8NI27 1593 aaKnown RBP30.15■■■□□ 2.42
PTK7-211ENST00000473339 KIF21AQ7Z4S6 1674 aa30.11■■■□□ 2.41
PTK7-211ENST00000473339 CFTRP13569 1480 aa30.06■■■□□ 2.4
PTK7-211ENST00000473339 CCDC88BA6NC98 1476 aa29.95■■■□□ 2.39
PTK7-211ENST00000473339 MRC2Q9UBG0 1479 aa29.91■■■□□ 2.38
PTK7-211ENST00000473339 FANCD2Q9BXW9 1451 aa29.9■■■□□ 2.38
PTK7-211ENST00000473339 DNAJC5Q9H3Z4 198 aa29.89■■■□□ 2.38
PTK7-211ENST00000473339 WDR62O43379 1518 aa29.86■■■□□ 2.37
PTK7-211ENST00000473339 CEP164Q9UPV0 1460 aa29.85■■■□□ 2.37
PTK7-211ENST00000473339 URB2Q14146 1524 aaKnown RBP29.69■■■□□ 2.34
PTK7-211ENST00000473339 PRDM2Q13029 1718 aa29.6■■■□□ 2.33
PTK7-211ENST00000473339 TOPBP1Q92547 1522 aa29.4■■■□□ 2.3
PTK7-211ENST00000473339 SUPT5HO00267 1087 aaKnown RBP29.4■■■□□ 2.3
PTK7-211ENST00000473339 ABCC8Q09428 1581 aa29.3■■■□□ 2.28
PTK7-211ENST00000473339 DNMBPQ6XZF7 1577 aa29.3■■■□□ 2.28
PTK7-211ENST00000473339 IFT140Q96RY7 1462 aa29.27■■■□□ 2.28
PTK7-211ENST00000473339 ZNF608Q9ULD9 1512 aaPredicted RBP29.25■■■□□ 2.27
PTK7-211ENST00000473339 POLA1P09884 1462 aaPredicted RBP29.16■■■□□ 2.26
PTK7-211ENST00000473339 TARBP1Q13395 1621 aaKnown RBP29.13■■■□□ 2.25
PTK7-211ENST00000473339 CUX1P39880 1505 aa29.09■■■□□ 2.25
PTK7-211ENST00000473339 RAD54L2Q9Y4B4 1467 aa29.05■■■□□ 2.24
PTK7-211ENST00000473339 AQRO60306 1485 aaKnown RBP eCLIP29.04■■■□□ 2.245e-7■■■■■ 27.6
PTK7-211ENST00000473339 EIF4G3O43432 1585 aaKnown RBP29.01■■■□□ 2.24
PTK7-211ENST00000473339 OSCARQ8IYS5 282 aa29.01■■■□□ 2.23
PTK7-211ENST00000473339 FGD5Q6ZNL6 1462 aa29■■■□□ 2.23
PTK7-211ENST00000473339 SOGA1O94964 1423 aa29■■■□□ 2.23
PTK7-211ENST00000473339 TDRD9Q8NDG6 1382 aaKnown RBP28.91■■■□□ 2.22
PTK7-211ENST00000473339 WDR97A6NE52 1622 aa28.77■■■□□ 2.2
PTK7-211ENST00000473339 ABCA10Q8WWZ4 1543 aa28.73■■■□□ 2.19
PTK7-211ENST00000473339 WRNQ14191 1432 aaPredicted RBP eCLIP28.72■■■□□ 2.19
PTK7-211ENST00000473339 SNAPC4Q5SXM2 1469 aa28.7■■■□□ 2.18
PTK7-211ENST00000473339 SYNJ1O43426 1573 aa28.7■■■□□ 2.18
PTK7-211ENST00000473339 TOP2BQ02880 1626 aa28.69■■■□□ 2.18
PTK7-211ENST00000473339 GRIN2BQ13224 1484 aa28.67■■■□□ 2.18
PTK7-211ENST00000473339 BIVM-ERCC5R4GMW8 1640 aa28.67■■■□□ 2.18
PTK7-211ENST00000473339 CHD1O14646 1710 aa28.66■■■□□ 2.18
PTK7-211ENST00000473339 GAPVD1Q14C86 1478 aa28.64■■■□□ 2.17
PTK7-211ENST00000473339 TRIM41Q8WV44 630 aa28.63■■■□□ 2.17
PTK7-211ENST00000473339 MAGI1Q96QZ7 1491 aaPredicted RBP28.63■■■□□ 2.17
PTK7-211ENST00000473339 FBLN2P98095 1184 aa28.62■■■□□ 2.17
PTK7-211ENST00000473339 ABCA5Q8WWZ7 1642 aa28.61■■■□□ 2.17
PTK7-211ENST00000473339 RIMBP3CA6NJZ7 1639 aa28.57■■■□□ 2.16
PTK7-211ENST00000473339 RIMBP3BA6NNM3 1639 aa28.57■■■□□ 2.16
PTK7-211ENST00000473339 RIMBP3Q9UFD9 1639 aa28.57■■■□□ 2.16
PTK7-211ENST00000473339 ARHGEF11O15085 1522 aa28.56■■■□□ 2.16
PTK7-211ENST00000473339 SYNJ2O15056 1496 aa28.54■■■□□ 2.16
PTK7-211ENST00000473339 CHMP7Q8WUX9 453 aaPredicted RBP28.52■■■□□ 2.16
PTK7-211ENST00000473339 PBRM1Q86U86 1689 aa28.51■■■□□ 2.15
PTK7-211ENST00000473339 CLASP1Q7Z460 1538 aa28.47■■■□□ 2.15
PTK7-211ENST00000473339 ARAP1Q96P48 1450 aa28.34■■■□□ 2.13
PTK7-211ENST00000473339 ADAMTS12P58397 1594 aa28.34■■■□□ 2.13
PTK7-211ENST00000473339 ERICH3Q5RHP9 1530 aa28.33■■■□□ 2.13
PTK7-211ENST00000473339 GRIN2AQ12879 1464 aa28.32■■■□□ 2.12
PTK7-211ENST00000473339 CYB5RLQ6IPT4 315 aa28.31■■■□□ 2.12
PTK7-211ENST00000473339 FHAD1B1AJZ9 1412 aa28.3■■■□□ 2.12
PTK7-211ENST00000473339 NUP160Q12769 1436 aa28.27■■■□□ 2.12
PTK7-211ENST00000473339 CEP170Q5SW79 1584 aa28.22■■■□□ 2.11
PTK7-211ENST00000473339 IGF1RP08069 1367 aa28.19■■■□□ 2.1
PTK7-211ENST00000473339 KIF27Q86VH2 1401 aa28.11■■■□□ 2.09
PTK7-211ENST00000473339 ERCC6L2Q5T890 1561 aa28.09■■■□□ 2.09
PTK7-211ENST00000473339 SHROOM2Q13796 1616 aa28.05■■■□□ 2.08
PTK7-211ENST00000473339 JPH4Q96JJ6 628 aa27.95■■■□□ 2.06
PTK7-211ENST00000473339 RUSC2Q8N2Y8 1516 aa27.94■■■□□ 2.06
PTK7-211ENST00000473339 CUL7Q14999 1698 aa27.93■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms