RNA–Protein interactions for RNA: ENST00000473642.1

CCL20-203, Transcript of C-C motif chemokine ligand 20, humanhuman

TSL 2

Gene CCL20, Length 680 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20-203ENST00000473642 AEBP2Q6ZN18 517 aaPredicted RBP28.84■■■□□ 2.21
CCL20-203ENST00000473642 CHIC1Q5VXU3 224 aa27.36■■□□□ 1.97
CCL20-203ENST00000473642 SENP3Q9H4L4 574 aaPredicted RBP24.71■■□□□ 1.55
CCL20-203ENST00000473642 PHF23Q9BUL5 403 aaPredicted RBP24.37■■□□□ 1.49
CCL20-203ENST00000473642 FOXD1Q16676 465 aa23■■□□□ 1.27
CCL20-203ENST00000473642 PLPPR3Q6T4P5 718 aa21.87■■□□□ 1.09
CCL20-203ENST00000473642 MSH5O43196 834 aa21.62■■□□□ 1.05
CCL20-203ENST00000473642 PIAS4Q8N2W9 510 aaPredicted RBP21.52■■□□□ 1.04
CCL20-203ENST00000473642 PPP6R1Q9UPN7 881 aa21.41■■□□□ 1.02
CCL20-203ENST00000473642 ADRA2BP18089 450 aa21.38■■□□□ 1.01
CCL20-203ENST00000473642 POTEDQ86YR6 584 aa21.2■□□□□ 0.98
CCL20-203ENST00000473642 SCAF1Q9H7N4 1312 aaKnown RBP19.67■□□□□ 0.74
CCL20-203ENST00000473642 MAPK8IP2Q13387 824 aaPredicted RBP19.66■□□□□ 0.74
CCL20-203ENST00000473642 DMRT2Q9Y5R5 561 aa19.55■□□□□ 0.72
CCL20-203ENST00000473642 PPP4R3CPQ6ZMV5 832 aa19.14■□□□□ 0.65
CCL20-203ENST00000473642 DCAF8L1A6NGE4 600 aa18.86■□□□□ 0.61
CCL20-203ENST00000473642 CNKSR2Q8WXI2 1034 aa18.82■□□□□ 0.6
CCL20-203ENST00000473642 HOXD11P31277 338 aaPredicted RBP18.79■□□□□ 0.6
CCL20-203ENST00000473642 RNF216Q9NWF9 866 aaPredicted RBP18.65■□□□□ 0.58
CCL20-203ENST00000473642 CACNB1Q02641 598 aaPredicted RBP18.64■□□□□ 0.57
CCL20-203ENST00000473642 NCBP3Q53F19 620 aaKnown RBP18.45■□□□□ 0.54
CCL20-203ENST00000473642 RNF39Q9H2S5 420 aa18.38■□□□□ 0.53
CCL20-203ENST00000473642 DNAJC5BQ9UF47 199 aa18.17■□□□□ 0.5
CCL20-203ENST00000473642 C1QBPQ07021 282 aaKnown RBP18.16■□□□□ 0.5
CCL20-203ENST00000473642 NPM3O75607 178 aaKnown RBP18.08■□□□□ 0.48
CCL20-203ENST00000473642 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.99■□□□□ 0.47
CCL20-203ENST00000473642 KCNA4P22459 653 aa17.66■□□□□ 0.42
CCL20-203ENST00000473642 U3KPZ7 1027 aaPredicted RBP17.51■□□□□ 0.39
CCL20-203ENST00000473642 CAPN15O75808 1086 aa17.36■□□□□ 0.37
CCL20-203ENST00000473642 SPINK5Q9NQ38 1064 aaPredicted RBP17.3■□□□□ 0.36
CCL20-203ENST00000473642 SLC4A2P04920 1241 aa17.27■□□□□ 0.36
CCL20-203ENST00000473642 DSG3P32926 999 aa17.2■□□□□ 0.34
CCL20-203ENST00000473642 APLP2Q06481 763 aa17.14■□□□□ 0.33
CCL20-203ENST00000473642 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.09■□□□□ 0.33
CCL20-203ENST00000473642 HNRNPUL2Q1KMD3 747 aaKnown RBP17.09■□□□□ 0.33
CCL20-203ENST00000473642 TRHP20396 242 aaPredicted RBP17.05■□□□□ 0.32
CCL20-203ENST00000473642 ZNF219Q9P2Y4 722 aaPredicted RBP17■□□□□ 0.31
CCL20-203ENST00000473642 SAMD1Q6SPF0 538 aaPredicted RBP16.96■□□□□ 0.31
CCL20-203ENST00000473642 ABCB7O75027 752 aa16.89■□□□□ 0.29
CCL20-203ENST00000473642 MYCNP04198 464 aaPredicted RBP16.77■□□□□ 0.28
CCL20-203ENST00000473642 SLC4A1APQ9BWU0 796 aaKnown RBP16.7■□□□□ 0.26
CCL20-203ENST00000473642 POTEHQ6S545 545 aa16.63■□□□□ 0.25
CCL20-203ENST00000473642 POLA2Q14181 598 aa16.55■□□□□ 0.24
CCL20-203ENST00000473642 FOXD4L1Q9NU39 408 aa16.54■□□□□ 0.24
CCL20-203ENST00000473642 RBM42Q9BTD8 480 aaKnown RBP16.48■□□□□ 0.23
CCL20-203ENST00000473642 ATF5Q9Y2D1 282 aaPredicted RBP16.33■□□□□ 0.2
CCL20-203ENST00000473642 ZBTB12Q9Y330 459 aaPredicted RBP16.23■□□□□ 0.19
CCL20-203ENST00000473642 ZBTB22O15209 634 aa16.17■□□□□ 0.18
CCL20-203ENST00000473642 CHRDL2Q6WN34 429 aa16.12■□□□□ 0.17
CCL20-203ENST00000473642 AKT1S1Q96B36 256 aa16.06■□□□□ 0.16
CCL20-203ENST00000473642 ATXN8OSP0DMR3 200 aa16.04■□□□□ 0.16
CCL20-203ENST00000473642 OSCARQ8IYS5 282 aa15.98■□□□□ 0.15
CCL20-203ENST00000473642 REM2Q8IYK8 340 aaPredicted RBP15.88■□□□□ 0.13
CCL20-203ENST00000473642 FBLN2P98095 1184 aa15.81■□□□□ 0.12
CCL20-203ENST00000473642 PITPNM1O00562 1244 aa15.7■□□□□ 0.1
CCL20-203ENST00000473642 SPDYE2BA6NHP3 402 aa15.69■□□□□ 0.1
CCL20-203ENST00000473642 SPDYE6P0CI01 402 aa15.69■□□□□ 0.1
CCL20-203ENST00000473642 SPDYE2Q495Y8 402 aa15.69■□□□□ 0.1
CCL20-203ENST00000473642 PIP4P2Q8N4L2 257 aa15.69■□□□□ 0.1
CCL20-203ENST00000473642 FXR2P51116 673 aaKnown RBP eCLIP15.58■□□□□ 0.08
CCL20-203ENST00000473642 MKRN4PQ13434 485 aaPredicted RBP15.56■□□□□ 0.08
CCL20-203ENST00000473642 SP7Q8TDD2 431 aaPredicted RBP15.54■□□□□ 0.08
CCL20-203ENST00000473642 ZNF692Q9BU19 519 aaPredicted RBP15.53■□□□□ 0.08
CCL20-203ENST00000473642 HAX1O00165 279 aa15.51■□□□□ 0.07
CCL20-203ENST00000473642 CLEC11AQ9Y240 323 aa15.48■□□□□ 0.07
CCL20-203ENST00000473642 SPDYE1Q8NFV5 336 aaPredicted RBP15.46■□□□□ 0.07
CCL20-203ENST00000473642 SSUH2Q9Y2M2 353 aa15.41■□□□□ 0.06
CCL20-203ENST00000473642 CSRNP3Q8WYN3 585 aa15.4■□□□□ 0.06
CCL20-203ENST00000473642 PRKAR2AP13861 404 aaKnown RBP15.34■□□□□ 0.05
CCL20-203ENST00000473642 PABPN1Q86U42 306 aaKnown RBP eCLIP15.27■□□□□ 0.04
CCL20-203ENST00000473642 PRR29P0C7W0 189 aa15.21■□□□□ 0.03
CCL20-203ENST00000473642 EVX2Q03828 476 aa15.2■□□□□ 0.02
CCL20-203ENST00000473642 EHMT2Q96KQ7 1210 aa15.2■□□□□ 0.02
CCL20-203ENST00000473642 CHADLQ6NUI6 762 aa15.13■□□□□ 0.01
CCL20-203ENST00000473642 C19orf67A6NJJ6 358 aa15.08■□□□□ 0
CCL20-203ENST00000473642 GABBR2O75899 941 aa14.91□□□□□ -0.02
CCL20-203ENST00000473642 FARP1Q9Y4F1 1045 aaPredicted RBP14.9□□□□□ -0.02
CCL20-203ENST00000473642 STAG3Q9UJ98 1225 aa14.88□□□□□ -0.03
CCL20-203ENST00000473642 SPDYE4A6NLX3 237 aa14.86□□□□□ -0.03
CCL20-203ENST00000473642 CD44P16070 742 aaKnown RBP14.85□□□□□ -0.03
CCL20-203ENST00000473642 CREBZFQ9NS37 354 aa14.72□□□□□ -0.05
CCL20-203ENST00000473642 CLCN6P51797 869 aa14.71□□□□□ -0.05
CCL20-203ENST00000473642 ZRANB1Q9UGI0 708 aa14.64□□□□□ -0.07
CCL20-203ENST00000473642 LHX8Q68G74 356 aa14.6□□□□□ -0.07
CCL20-203ENST00000473642 ZNF579Q8NAF0 562 aaKnown RBP14.57□□□□□ -0.08
CCL20-203ENST00000473642 PAK3O75914 559 aaPredicted RBP14.56□□□□□ -0.08
CCL20-203ENST00000473642 DCBLD2Q96PD2 775 aa14.56□□□□□ -0.08
CCL20-203ENST00000473642 NPM1P06748 294 aaKnown RBP eCLIP14.55□□□□□ -0.08
CCL20-203ENST00000473642 POTEIP0CG38 1075 aa14.53□□□□□ -0.08
CCL20-203ENST00000473642 MNX1P50219 401 aaPredicted RBP14.42□□□□□ -0.1
CCL20-203ENST00000473642 GALR2O43603 387 aaPredicted RBP14.41□□□□□ -0.1
CCL20-203ENST00000473642 PROM2Q8N271 834 aa14.39□□□□□ -0.11
CCL20-203ENST00000473642 PHF12Q96QT6 1004 aa14.37□□□□□ -0.11
CCL20-203ENST00000473642 PLEKHG5O94827 1062 aa14.3□□□□□ -0.12
CCL20-203ENST00000473642 MIER1Q8N108 512 aa14.25□□□□□ -0.13
CCL20-203ENST00000473642 TSPYL2Q9H2G4 693 aaPredicted RBP14.25□□□□□ -0.13
CCL20-203ENST00000473642 NISCHQ9Y2I1 1504 aa14.21□□□□□ -0.13
CCL20-203ENST00000473642 MS4A3Q96HJ5 214 aa14.18□□□□□ -0.14
CCL20-203ENST00000473642 CCDC61Q9Y6R9 512 aa14.13□□□□□ -0.15
CCL20-203ENST00000473642 PLCD3Q8N3E9 789 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms