RNA–Protein interactions for RNA: ENST00000601216.1

RPS11-207, Transcript of ribosomal protein S11, humanhuman

TSL 4

Gene RPS11, Length 602 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS11-207ENST00000601216 NISCHQ9Y2I1 1504 aa24.62■■□□□ 1.53
RPS11-207ENST00000601216 ABCC9O60706 1549 aa22.56■■□□□ 1.2
RPS11-207ENST00000601216 CCDC180Q9P1Z9 1646 aa22.18■■□□□ 1.14
RPS11-207ENST00000601216 DNAJC5BQ9UF47 199 aa21.52■■□□□ 1.04
RPS11-207ENST00000601216 RB1CC1Q8TDY2 1594 aa21.27■□□□□ 0.99
RPS11-207ENST00000601216 NACADO15069 1562 aa21.06■□□□□ 0.96
RPS11-207ENST00000601216 PABPN1Q86U42 306 aaKnown RBP eCLIP20.97■□□□□ 0.95
RPS11-207ENST00000601216 DCAF8L2P0C7V8 631 aa20.9■□□□□ 0.94
RPS11-207ENST00000601216 UNC13AQ9UPW8 1703 aa20.85■□□□□ 0.93
RPS11-207ENST00000601216 BICRAQ9NZM4 1560 aa20.74■□□□□ 0.91
RPS11-207ENST00000601216 MYO15BQ96JP2 1530 aa20.66■□□□□ 0.9
RPS11-207ENST00000601216 CC2D2AQ9P2K1 1620 aa20.35■□□□□ 0.85
RPS11-207ENST00000601216 ZCCHC6Q5VYS8 1495 aaKnown RBP20.34■□□□□ 0.85
RPS11-207ENST00000601216 CECR2Q9BXF3 1484 aa20.33■□□□□ 0.85
RPS11-207ENST00000601216 SHROOM4Q9ULL8 1493 aa20.33■□□□□ 0.85
RPS11-207ENST00000601216 DCAF1Q9Y4B6 1507 aa20.28■□□□□ 0.84
RPS11-207ENST00000601216 SCRIBQ14160 1630 aa20.24■□□□□ 0.83
RPS11-207ENST00000601216 EIF4G1Q04637 1599 aaKnown RBP20.22■□□□□ 0.83
RPS11-207ENST00000601216 DNAJC5Q9H3Z4 198 aa19.91■□□□□ 0.78
RPS11-207ENST00000601216 CUX2O14529 1486 aa19.52■□□□□ 0.72
RPS11-207ENST00000601216 NCAPD3P42695 1498 aa19.48■□□□□ 0.71
RPS11-207ENST00000601216 ERCC6Q03468 1493 aa19.44■□□□□ 0.7
RPS11-207ENST00000601216 ATAD2BQ9ULI0 1458 aa19.38■□□□□ 0.69
RPS11-207ENST00000601216 NESP48681 1621 aa19.32■□□□□ 0.68
RPS11-207ENST00000601216 HMGXB3Q12766 1538 aa19.27■□□□□ 0.68
RPS11-207ENST00000601216 SMARCA4P51532 1647 aa19.27■□□□□ 0.68
RPS11-207ENST00000601216 SMARCA2P51531 1590 aa19.26■□□□□ 0.67
RPS11-207ENST00000601216 THOC2Q8NI27 1593 aaKnown RBP19.15■□□□□ 0.66
RPS11-207ENST00000601216 BAZ1BQ9UIG0 1483 aaKnown RBP19.14■□□□□ 0.65
RPS11-207ENST00000601216 BAZ1AQ9NRL2 1556 aaPredicted RBP19.1■□□□□ 0.65
RPS11-207ENST00000601216 PEG3Q9GZU2 1588 aa19.08■□□□□ 0.65
RPS11-207ENST00000601216 LAMC3Q9Y6N6 1575 aa19.05■□□□□ 0.64
RPS11-207ENST00000601216 KIF21AQ7Z4S6 1674 aa19.01■□□□□ 0.63
RPS11-207ENST00000601216 MROH2BQ7Z745 1585 aa19■□□□□ 0.63
RPS11-207ENST00000601216 PDS5BQ9NTI5 1447 aa18.94■□□□□ 0.62
RPS11-207ENST00000601216 TRIM41Q8WV44 630 aa18.89■□□□□ 0.61
RPS11-207ENST00000601216 CADPSQ9ULU8 1353 aa18.86■□□□□ 0.61
RPS11-207ENST00000601216 MRC2Q9UBG0 1479 aa18.83■□□□□ 0.6
RPS11-207ENST00000601216 WDR62O43379 1518 aa18.8■□□□□ 0.6
RPS11-207ENST00000601216 WIZO95785 1651 aa18.75■□□□□ 0.59
RPS11-207ENST00000601216 CEP164Q9UPV0 1460 aa18.68■□□□□ 0.58
RPS11-207ENST00000601216 FANCD2Q9BXW9 1451 aa18.65■□□□□ 0.58
RPS11-207ENST00000601216 CFTRP13569 1480 aa18.59■□□□□ 0.57
RPS11-207ENST00000601216 OSCARQ8IYS5 282 aa18.58■□□□□ 0.56
RPS11-207ENST00000601216 URB2Q14146 1524 aaKnown RBP18.55■□□□□ 0.56
RPS11-207ENST00000601216 RSF1Q96T23 1441 aaPredicted RBP18.49■□□□□ 0.55
RPS11-207ENST00000601216 TOP2AP11388 1531 aaKnown RBP18.45■□□□□ 0.54
RPS11-207ENST00000601216 RIMBP3CA6NJZ7 1639 aa18.41■□□□□ 0.54
RPS11-207ENST00000601216 RIMBP3BA6NNM3 1639 aa18.41■□□□□ 0.54
RPS11-207ENST00000601216 RIMBP3Q9UFD9 1639 aa18.41■□□□□ 0.54
RPS11-207ENST00000601216 ZNF608Q9ULD9 1512 aaPredicted RBP18.39■□□□□ 0.53
RPS11-207ENST00000601216 PRDM2Q13029 1718 aa18.33■□□□□ 0.52
RPS11-207ENST00000601216 IFT140Q96RY7 1462 aa18.32■□□□□ 0.52
RPS11-207ENST00000601216 ARHGEF11O15085 1522 aa18.31■□□□□ 0.52
RPS11-207ENST00000601216 TOPBP1Q92547 1522 aa18.28■□□□□ 0.52
RPS11-207ENST00000601216 CCDC88BA6NC98 1476 aa18.27■□□□□ 0.52
RPS11-207ENST00000601216 EIF4G3O43432 1585 aaKnown RBP18.22■□□□□ 0.51
RPS11-207ENST00000601216 CYB5RLQ6IPT4 315 aa18.2■□□□□ 0.5
RPS11-207ENST00000601216 AQRO60306 1485 aaKnown RBP eCLIP18.16■□□□□ 0.5not detected■■■■■ 69
RPS11-207ENST00000601216 DNMBPQ6XZF7 1577 aa18.15■□□□□ 0.5
RPS11-207ENST00000601216 CHD1O14646 1710 aa18.15■□□□□ 0.5
RPS11-207ENST00000601216 ABCC8Q09428 1581 aa18.14■□□□□ 0.49
RPS11-207ENST00000601216 TARBP1Q13395 1621 aaKnown RBP18.14■□□□□ 0.49
RPS11-207ENST00000601216 ARAP1Q96P48 1450 aa18.14■□□□□ 0.49
RPS11-207ENST00000601216 POLA1P09884 1462 aaPredicted RBP18.07■□□□□ 0.48
RPS11-207ENST00000601216 TRHP20396 242 aaPredicted RBP18.06■□□□□ 0.48
RPS11-207ENST00000601216 FBLN2P98095 1184 aa18.06■□□□□ 0.48
RPS11-207ENST00000601216 RAD54L2Q9Y4B4 1467 aa18.03■□□□□ 0.48
RPS11-207ENST00000601216 TDRD9Q8NDG6 1382 aaKnown RBP18■□□□□ 0.47
RPS11-207ENST00000601216 SOGA1O94964 1423 aa17.96■□□□□ 0.47
RPS11-207ENST00000601216 SNAPC4Q5SXM2 1469 aa17.95■□□□□ 0.46
RPS11-207ENST00000601216 CLASP1Q7Z460 1538 aa17.94■□□□□ 0.46
RPS11-207ENST00000601216 FGD5Q6ZNL6 1462 aa17.9■□□□□ 0.46
RPS11-207ENST00000601216 CHMP7Q8WUX9 453 aaPredicted RBP17.87■□□□□ 0.45
RPS11-207ENST00000601216 CUX1P39880 1505 aa17.87■□□□□ 0.45
RPS11-207ENST00000601216 MAGI1Q96QZ7 1491 aaPredicted RBP17.86■□□□□ 0.45
RPS11-207ENST00000601216 WDR97A6NE52 1622 aa17.86■□□□□ 0.45
RPS11-207ENST00000601216 SYNJ1O43426 1573 aa17.85■□□□□ 0.45
RPS11-207ENST00000601216 GRIN2BQ13224 1484 aa17.83■□□□□ 0.45
RPS11-207ENST00000601216 SYNJ2O15056 1496 aa17.81■□□□□ 0.44
RPS11-207ENST00000601216 GAPVD1Q14C86 1478 aa17.75■□□□□ 0.43
RPS11-207ENST00000601216 PBRM1Q86U86 1689 aa17.74■□□□□ 0.43
RPS11-207ENST00000601216 AEBP2Q6ZN18 517 aaPredicted RBP17.73■□□□□ 0.43
RPS11-207ENST00000601216 ERCC6L2Q5T890 1561 aa17.69■□□□□ 0.42
RPS11-207ENST00000601216 ABCA5Q8WWZ7 1642 aa17.69■□□□□ 0.42
RPS11-207ENST00000601216 ABCA10Q8WWZ4 1543 aa17.67■□□□□ 0.42
RPS11-207ENST00000601216 GRIN2AQ12879 1464 aa17.61■□□□□ 0.41
RPS11-207ENST00000601216 CEP170Q5SW79 1584 aa17.59■□□□□ 0.41
RPS11-207ENST00000601216 NUP160Q12769 1436 aa17.58■□□□□ 0.41
RPS11-207ENST00000601216 ADAMTS12P58397 1594 aa17.57■□□□□ 0.4
RPS11-207ENST00000601216 SHROOM2Q13796 1616 aa17.54■□□□□ 0.4
RPS11-207ENST00000601216 WRNQ14191 1432 aaPredicted RBP eCLIP17.52■□□□□ 0.4
RPS11-207ENST00000601216 FHAD1B1AJZ9 1412 aa17.49■□□□□ 0.39
RPS11-207ENST00000601216 KIF13AQ9H1H9 1805 aa17.49■□□□□ 0.39
RPS11-207ENST00000601216 TOP2BQ02880 1626 aa17.45■□□□□ 0.38
RPS11-207ENST00000601216 BIVM-ERCC5R4GMW8 1640 aa17.45■□□□□ 0.38
RPS11-207ENST00000601216 PRG4Q92954 1404 aaPredicted RBP17.43■□□□□ 0.38
RPS11-207ENST00000601216 ERICH3Q5RHP9 1530 aa17.42■□□□□ 0.38
RPS11-207ENST00000601216 SUPT5HO00267 1087 aaKnown RBP17.41■□□□□ 0.38
RPS11-207ENST00000601216 JPH4Q96JJ6 628 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms