Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CLCN4P51793 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.91■□□□□ 0.62
CLCN4P51793 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.91■□□□□ 0.62
CLCN4P51793 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLCN4P51793 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.91■□□□□ 0.62
CLCN4P51793 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLCN4P51793 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.91■□□□□ 0.62
CLCN4P51793 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CLCN4P51793 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CLCN4P51793 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLCN4P51793 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLCN4P51793 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLCN4P51793 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CLCN4P51793 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.91■□□□□ 0.62
CLCN4P51793 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.91■□□□□ 0.62
CLCN4P51793 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.91■□□□□ 0.62
CLCN4P51793 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CLCN4P51793 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLCN4P51793 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLCN4P51793 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.9■□□□□ 0.62
CLCN4P51793 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLCN4P51793 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLCN4P51793 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLCN4P51793 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.9■□□□□ 0.62
CLCN4P51793 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLCN4P51793 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLCN4P51793 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLCN4P51793 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.9■□□□□ 0.62
CLCN4P51793 AC007967.3-201ENST00000434308 558 ntBASIC18.9■□□□□ 0.62
CLCN4P51793 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.9■□□□□ 0.62
CLCN4P51793 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLCN4P51793 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.9■□□□□ 0.62
CLCN4P51793 AC105339.3-201ENST00000560043 636 ntBASIC18.9■□□□□ 0.62
CLCN4P51793 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.9■□□□□ 0.62
CLCN4P51793 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.9■□□□□ 0.62
CLCN4P51793 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.9■□□□□ 0.62
CLCN4P51793 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CLCN4P51793 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.9■□□□□ 0.62
CLCN4P51793 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.9■□□□□ 0.62
CLCN4P51793 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLCN4P51793 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLCN4P51793 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLCN4P51793 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLCN4P51793 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLCN4P51793 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLCN4P51793 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.9■□□□□ 0.62
CLCN4P51793 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.9■□□□□ 0.62
CLCN4P51793 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLCN4P51793 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLCN4P51793 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CLCN4P51793 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CLCN4P51793 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
CLCN4P51793 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CLCN4P51793 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.89■□□□□ 0.62
CLCN4P51793 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLCN4P51793 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
CLCN4P51793 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CLCN4P51793 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLCN4P51793 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.89■□□□□ 0.61
CLCN4P51793 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLCN4P51793 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLCN4P51793 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLCN4P51793 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLCN4P51793 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.89■□□□□ 0.61
CLCN4P51793 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLCN4P51793 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CLCN4P51793 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.89■□□□□ 0.61
CLCN4P51793 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.89■□□□□ 0.61
CLCN4P51793 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.89■□□□□ 0.61
CLCN4P51793 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.89■□□□□ 0.61
CLCN4P51793 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.89■□□□□ 0.61
CLCN4P51793 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.89■□□□□ 0.61
CLCN4P51793 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLCN4P51793 AC055717.3-201ENST00000622967 595 ntBASIC18.89■□□□□ 0.61
CLCN4P51793 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CLCN4P51793 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CLCN4P51793 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.89■□□□□ 0.61
CLCN4P51793 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CLCN4P51793 AC097374.2-201ENST00000618617 1306 ntBASIC18.89■□□□□ 0.61
CLCN4P51793 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.89■□□□□ 0.61
CLCN4P51793 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLCN4P51793 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLCN4P51793 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CLCN4P51793 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLCN4P51793 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.89■□□□□ 0.61
CLCN4P51793 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.89■□□□□ 0.61
CLCN4P51793 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLCN4P51793 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLCN4P51793 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLCN4P51793 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLCN4P51793 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLCN4P51793 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLCN4P51793 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.88■□□□□ 0.61
CLCN4P51793 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLCN4P51793 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLCN4P51793 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLCN4P51793 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.88■□□□□ 0.61
CLCN4P51793 KRT18P3-201ENST00000451602 1288 ntBASIC18.88■□□□□ 0.61
CLCN4P51793 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC18.88■□□□□ 0.61
CLCN4P51793 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms