Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00959A0A1B0GUT2 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC12.32□□□□□ -0.44
LINC00959A0A1B0GUT2 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00959A0A1B0GUT2 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00959A0A1B0GUT2 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00959A0A1B0GUT2 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
LINC00959A0A1B0GUT2 FST-202ENST00000396947 2538 ntTSL 5 BASIC12.32□□□□□ -0.44
LINC00959A0A1B0GUT2 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00959A0A1B0GUT2 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC00959A0A1B0GUT2 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00959A0A1B0GUT2 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
LINC00959A0A1B0GUT2 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00959A0A1B0GUT2 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00959A0A1B0GUT2 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00959A0A1B0GUT2 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00959A0A1B0GUT2 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00959A0A1B0GUT2 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
LINC00959A0A1B0GUT2 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
LINC00959A0A1B0GUT2 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC12.31□□□□□ -0.44
LINC00959A0A1B0GUT2 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00959A0A1B0GUT2 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00959A0A1B0GUT2 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC12.31□□□□□ -0.44
LINC00959A0A1B0GUT2 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00959A0A1B0GUT2 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00959A0A1B0GUT2 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00959A0A1B0GUT2 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00959A0A1B0GUT2 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00959A0A1B0GUT2 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00959A0A1B0GUT2 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00959A0A1B0GUT2 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00959A0A1B0GUT2 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
LINC00959A0A1B0GUT2 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC12.31□□□□□ -0.44
LINC00959A0A1B0GUT2 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC12.31□□□□□ -0.44
LINC00959A0A1B0GUT2 C2orf69P3-201ENST00000565542 1120 ntBASIC12.31□□□□□ -0.44
LINC00959A0A1B0GUT2 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC12.31□□□□□ -0.44
LINC00959A0A1B0GUT2 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC12.31□□□□□ -0.44
LINC00959A0A1B0GUT2 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC12.31□□□□□ -0.44
LINC00959A0A1B0GUT2 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
LINC00959A0A1B0GUT2 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC12.31□□□□□ -0.44
LINC00959A0A1B0GUT2 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00959A0A1B0GUT2 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
LINC00959A0A1B0GUT2 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00959A0A1B0GUT2 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00959A0A1B0GUT2 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00959A0A1B0GUT2 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00959A0A1B0GUT2 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC12.31□□□□□ -0.44
LINC00959A0A1B0GUT2 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC12.31□□□□□ -0.44
LINC00959A0A1B0GUT2 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00959A0A1B0GUT2 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC12.31□□□□□ -0.44
LINC00959A0A1B0GUT2 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00959A0A1B0GUT2 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00959A0A1B0GUT2 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00959A0A1B0GUT2 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00959A0A1B0GUT2 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC00959A0A1B0GUT2 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC12.31□□□□□ -0.44
LINC00959A0A1B0GUT2 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
LINC00959A0A1B0GUT2 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00959A0A1B0GUT2 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC12.3□□□□□ -0.44
LINC00959A0A1B0GUT2 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
LINC00959A0A1B0GUT2 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00959A0A1B0GUT2 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
LINC00959A0A1B0GUT2 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
LINC00959A0A1B0GUT2 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC12.3□□□□□ -0.44
LINC00959A0A1B0GUT2 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
LINC00959A0A1B0GUT2 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC12.3□□□□□ -0.44
LINC00959A0A1B0GUT2 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
LINC00959A0A1B0GUT2 MIR718-201ENST00000390190 70 ntBASIC12.3□□□□□ -0.44
LINC00959A0A1B0GUT2 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00959A0A1B0GUT2 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00959A0A1B0GUT2 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
LINC00959A0A1B0GUT2 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00959A0A1B0GUT2 AC007663.1-201ENST00000438948 1240 ntBASIC12.3□□□□□ -0.44
LINC00959A0A1B0GUT2 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC12.3□□□□□ -0.44
LINC00959A0A1B0GUT2 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00959A0A1B0GUT2 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00959A0A1B0GUT2 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00959A0A1B0GUT2 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00959A0A1B0GUT2 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC12.3□□□□□ -0.44
LINC00959A0A1B0GUT2 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00959A0A1B0GUT2 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
LINC00959A0A1B0GUT2 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC12.3□□□□□ -0.44
LINC00959A0A1B0GUT2 FITM1-202ENST00000559294 800 ntBASIC12.3□□□□□ -0.44
LINC00959A0A1B0GUT2 MIR4785-201ENST00000585005 73 ntBASIC12.3□□□□□ -0.44
LINC00959A0A1B0GUT2 USP36-216ENST00000589424 970 ntTSL 5 BASIC12.3□□□□□ -0.44
LINC00959A0A1B0GUT2 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00959A0A1B0GUT2 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC12.3□□□□□ -0.44
LINC00959A0A1B0GUT2 AC010240.3-201ENST00000607688 395 ntBASIC12.3□□□□□ -0.44
LINC00959A0A1B0GUT2 AP000525.1-201ENST00000608286 694 ntBASIC12.3□□□□□ -0.44
LINC00959A0A1B0GUT2 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00959A0A1B0GUT2 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00959A0A1B0GUT2 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00959A0A1B0GUT2 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC12.3□□□□□ -0.44
LINC00959A0A1B0GUT2 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00959A0A1B0GUT2 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00959A0A1B0GUT2 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC12.3□□□□□ -0.44
LINC00959A0A1B0GUT2 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
LINC00959A0A1B0GUT2 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
LINC00959A0A1B0GUT2 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LINC00959A0A1B0GUT2 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC12.29□□□□□ -0.44
LINC00959A0A1B0GUT2 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms