Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 AC009065.1-201ENST00000564055 1225 ntBASIC15.37■□□□□ 0.05
CLDND2Q8NHS1 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC15.37■□□□□ 0.05
CLDND2Q8NHS1 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CLDND2Q8NHS1 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
CLDND2Q8NHS1 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC15.37■□□□□ 0.05
CLDND2Q8NHS1 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLDND2Q8NHS1 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CLDND2Q8NHS1 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CLDND2Q8NHS1 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC15.37■□□□□ 0.05
CLDND2Q8NHS1 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC15.37■□□□□ 0.05
CLDND2Q8NHS1 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLDND2Q8NHS1 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CLDND2Q8NHS1 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC15.37■□□□□ 0.05
CLDND2Q8NHS1 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLDND2Q8NHS1 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC15.37■□□□□ 0.05
CLDND2Q8NHS1 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLDND2Q8NHS1 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CLDND2Q8NHS1 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
CLDND2Q8NHS1 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CLDND2Q8NHS1 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLDND2Q8NHS1 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLDND2Q8NHS1 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
CLDND2Q8NHS1 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CLDND2Q8NHS1 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLDND2Q8NHS1 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLDND2Q8NHS1 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
CLDND2Q8NHS1 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLDND2Q8NHS1 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC15.36■□□□□ 0.05
CLDND2Q8NHS1 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLDND2Q8NHS1 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC15.36■□□□□ 0.05
CLDND2Q8NHS1 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC15.36■□□□□ 0.05
CLDND2Q8NHS1 TPM4P1-201ENST00000436100 807 ntBASIC15.36■□□□□ 0.05
CLDND2Q8NHS1 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CLDND2Q8NHS1 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLDND2Q8NHS1 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC15.36■□□□□ 0.05
CLDND2Q8NHS1 SDHD-206ENST00000528182 754 ntTSL 3 BASIC15.36■□□□□ 0.05
CLDND2Q8NHS1 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC15.36■□□□□ 0.05
CLDND2Q8NHS1 AC005332.3-201ENST00000589904 676 ntBASIC15.36■□□□□ 0.05
CLDND2Q8NHS1 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.36■□□□□ 0.05
CLDND2Q8NHS1 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC15.36■□□□□ 0.05
CLDND2Q8NHS1 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC15.36■□□□□ 0.05
CLDND2Q8NHS1 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
CLDND2Q8NHS1 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC15.36■□□□□ 0.05
CLDND2Q8NHS1 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLDND2Q8NHS1 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLDND2Q8NHS1 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLDND2Q8NHS1 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC15.36■□□□□ 0.05
CLDND2Q8NHS1 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CLDND2Q8NHS1 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC15.36■□□□□ 0.05
CLDND2Q8NHS1 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
CLDND2Q8NHS1 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLDND2Q8NHS1 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CLDND2Q8NHS1 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLDND2Q8NHS1 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLDND2Q8NHS1 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC15.35■□□□□ 0.05
CLDND2Q8NHS1 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
CLDND2Q8NHS1 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLDND2Q8NHS1 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
CLDND2Q8NHS1 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC15.35■□□□□ 0.05
CLDND2Q8NHS1 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC15.35■□□□□ 0.05
CLDND2Q8NHS1 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CLDND2Q8NHS1 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLDND2Q8NHS1 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CLDND2Q8NHS1 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLDND2Q8NHS1 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC15.35■□□□□ 0.05
CLDND2Q8NHS1 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
CLDND2Q8NHS1 MTMR9LP-203ENST00000426597 1545 ntBASIC15.35■□□□□ 0.05
CLDND2Q8NHS1 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC15.35■□□□□ 0.05
CLDND2Q8NHS1 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLDND2Q8NHS1 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLDND2Q8NHS1 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLDND2Q8NHS1 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLDND2Q8NHS1 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLDND2Q8NHS1 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
CLDND2Q8NHS1 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLDND2Q8NHS1 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLDND2Q8NHS1 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC15.35■□□□□ 0.05
CLDND2Q8NHS1 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLDND2Q8NHS1 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC15.35■□□□□ 0.05
CLDND2Q8NHS1 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLDND2Q8NHS1 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.35■□□□□ 0.05
CLDND2Q8NHS1 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC15.35■□□□□ 0.05
CLDND2Q8NHS1 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CLDND2Q8NHS1 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
CLDND2Q8NHS1 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC15.35■□□□□ 0.05
CLDND2Q8NHS1 AL390719.2-201ENST00000606993 987 ntBASIC15.35■□□□□ 0.05
CLDND2Q8NHS1 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CLDND2Q8NHS1 VPS72-207ENST00000640458 689 ntTSL 5 BASIC15.35■□□□□ 0.05
CLDND2Q8NHS1 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC15.35■□□□□ 0.05
CLDND2Q8NHS1 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLDND2Q8NHS1 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLDND2Q8NHS1 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
CLDND2Q8NHS1 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLDND2Q8NHS1 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC15.35■□□□□ 0.05
CLDND2Q8NHS1 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC15.35■□□□□ 0.05
CLDND2Q8NHS1 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CLDND2Q8NHS1 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CLDND2Q8NHS1 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC15.35■□□□□ 0.05
CLDND2Q8NHS1 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLDND2Q8NHS1 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms