Protein–RNA interactions for Protein: Q8N257

HIST3H2BB, Histone H2B type 3-B, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2BBQ8N257 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.47□□□□□ -0.25
HIST3H2BBQ8N257 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.47□□□□□ -0.25
HIST3H2BBQ8N257 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST3H2BBQ8N257 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC13.47□□□□□ -0.25
HIST3H2BBQ8N257 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HIST3H2BBQ8N257 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
HIST3H2BBQ8N257 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST3H2BBQ8N257 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC13.47□□□□□ -0.25
HIST3H2BBQ8N257 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
HIST3H2BBQ8N257 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC13.47□□□□□ -0.25
HIST3H2BBQ8N257 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC13.47□□□□□ -0.25
HIST3H2BBQ8N257 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HIST3H2BBQ8N257 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST3H2BBQ8N257 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST3H2BBQ8N257 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC13.47□□□□□ -0.25
HIST3H2BBQ8N257 MTDHP2-201ENST00000601468 714 ntBASIC13.47□□□□□ -0.25
HIST3H2BBQ8N257 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC13.47□□□□□ -0.25
HIST3H2BBQ8N257 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST3H2BBQ8N257 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC13.47□□□□□ -0.25
HIST3H2BBQ8N257 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC13.47□□□□□ -0.25
HIST3H2BBQ8N257 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST3H2BBQ8N257 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HIST3H2BBQ8N257 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
HIST3H2BBQ8N257 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HIST3H2BBQ8N257 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC13.47□□□□□ -0.25
HIST3H2BBQ8N257 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC13.47□□□□□ -0.25
HIST3H2BBQ8N257 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
HIST3H2BBQ8N257 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
HIST3H2BBQ8N257 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
HIST3H2BBQ8N257 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.47□□□□□ -0.25
HIST3H2BBQ8N257 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
HIST3H2BBQ8N257 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HIST3H2BBQ8N257 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.46□□□□□ -0.25
HIST3H2BBQ8N257 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC13.46□□□□□ -0.25
HIST3H2BBQ8N257 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC13.46□□□□□ -0.25
HIST3H2BBQ8N257 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HIST3H2BBQ8N257 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
HIST3H2BBQ8N257 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HIST3H2BBQ8N257 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HIST3H2BBQ8N257 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HIST3H2BBQ8N257 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HIST3H2BBQ8N257 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HIST3H2BBQ8N257 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HIST3H2BBQ8N257 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
HIST3H2BBQ8N257 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
HIST3H2BBQ8N257 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
HIST3H2BBQ8N257 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HIST3H2BBQ8N257 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC13.46□□□□□ -0.25
HIST3H2BBQ8N257 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC13.46□□□□□ -0.25
HIST3H2BBQ8N257 BEX3-202ENST00000372634 753 ntTSL 2 BASIC13.46□□□□□ -0.25
HIST3H2BBQ8N257 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
HIST3H2BBQ8N257 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC13.46□□□□□ -0.25
HIST3H2BBQ8N257 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
HIST3H2BBQ8N257 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
HIST3H2BBQ8N257 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
HIST3H2BBQ8N257 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
HIST3H2BBQ8N257 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
HIST3H2BBQ8N257 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC13.46□□□□□ -0.25
HIST3H2BBQ8N257 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
HIST3H2BBQ8N257 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
HIST3H2BBQ8N257 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
HIST3H2BBQ8N257 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
HIST3H2BBQ8N257 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
HIST3H2BBQ8N257 KRT8P45-201ENST00000414328 1447 ntBASIC13.46□□□□□ -0.26
HIST3H2BBQ8N257 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
HIST3H2BBQ8N257 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.26
HIST3H2BBQ8N257 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
HIST3H2BBQ8N257 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
HIST3H2BBQ8N257 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
HIST3H2BBQ8N257 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
HIST3H2BBQ8N257 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
HIST3H2BBQ8N257 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST3H2BBQ8N257 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST3H2BBQ8N257 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST3H2BBQ8N257 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
HIST3H2BBQ8N257 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST3H2BBQ8N257 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC13.45□□□□□ -0.26
HIST3H2BBQ8N257 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST3H2BBQ8N257 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST3H2BBQ8N257 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC13.45□□□□□ -0.26
HIST3H2BBQ8N257 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC13.45□□□□□ -0.26
HIST3H2BBQ8N257 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST3H2BBQ8N257 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
HIST3H2BBQ8N257 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
HIST3H2BBQ8N257 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.45□□□□□ -0.26
HIST3H2BBQ8N257 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST3H2BBQ8N257 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HIST3H2BBQ8N257 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST3H2BBQ8N257 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HIST3H2BBQ8N257 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC13.45□□□□□ -0.26
HIST3H2BBQ8N257 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
HIST3H2BBQ8N257 AC006058.4-201ENST00000624016 1670 ntBASIC13.45□□□□□ -0.26
HIST3H2BBQ8N257 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST3H2BBQ8N257 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST3H2BBQ8N257 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST3H2BBQ8N257 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
HIST3H2BBQ8N257 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
HIST3H2BBQ8N257 AC074183.2-201ENST00000623112 922 ntBASIC13.45□□□□□ -0.26
HIST3H2BBQ8N257 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
HIST3H2BBQ8N257 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms