Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.03■□□□□ 0.64
SCUBE3Q8IX30 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.03■□□□□ 0.64
SCUBE3Q8IX30 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.03■□□□□ 0.64
SCUBE3Q8IX30 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.03■□□□□ 0.64
SCUBE3Q8IX30 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SCUBE3Q8IX30 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SCUBE3Q8IX30 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SCUBE3Q8IX30 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SCUBE3Q8IX30 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SCUBE3Q8IX30 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SCUBE3Q8IX30 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.03■□□□□ 0.64
SCUBE3Q8IX30 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SCUBE3Q8IX30 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.03■□□□□ 0.64
SCUBE3Q8IX30 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
SCUBE3Q8IX30 AC018470.1-201ENST00000624790 3129 ntBASIC19.03■□□□□ 0.64
SCUBE3Q8IX30 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.02■□□□□ 0.64
SCUBE3Q8IX30 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.02■□□□□ 0.64
SCUBE3Q8IX30 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SCUBE3Q8IX30 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SCUBE3Q8IX30 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
SCUBE3Q8IX30 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SCUBE3Q8IX30 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.02■□□□□ 0.64
SCUBE3Q8IX30 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SCUBE3Q8IX30 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SCUBE3Q8IX30 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SCUBE3Q8IX30 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SCUBE3Q8IX30 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.02■□□□□ 0.64
SCUBE3Q8IX30 AL121894.2-201ENST00000602977 491 ntBASIC19.02■□□□□ 0.64
SCUBE3Q8IX30 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.02■□□□□ 0.64
SCUBE3Q8IX30 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.02■□□□□ 0.64
SCUBE3Q8IX30 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.63
SCUBE3Q8IX30 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.63
SCUBE3Q8IX30 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.02■□□□□ 0.63
SCUBE3Q8IX30 AC138028.4-201ENST00000564984 1845 ntBASIC19.02■□□□□ 0.63
SCUBE3Q8IX30 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.02■□□□□ 0.63
SCUBE3Q8IX30 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SCUBE3Q8IX30 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SCUBE3Q8IX30 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.01■□□□□ 0.63
SCUBE3Q8IX30 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.01■□□□□ 0.63
SCUBE3Q8IX30 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.01■□□□□ 0.63
SCUBE3Q8IX30 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
SCUBE3Q8IX30 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SCUBE3Q8IX30 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SCUBE3Q8IX30 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SCUBE3Q8IX30 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.01■□□□□ 0.63
SCUBE3Q8IX30 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SCUBE3Q8IX30 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
SCUBE3Q8IX30 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SCUBE3Q8IX30 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SCUBE3Q8IX30 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.01■□□□□ 0.63
SCUBE3Q8IX30 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.01■□□□□ 0.63
SCUBE3Q8IX30 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.01■□□□□ 0.63
SCUBE3Q8IX30 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SCUBE3Q8IX30 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.01■□□□□ 0.63
SCUBE3Q8IX30 AP000550.4-202ENST00000639755 178 ntBASIC19.01■□□□□ 0.63
SCUBE3Q8IX30 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SCUBE3Q8IX30 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.01■□□□□ 0.63
SCUBE3Q8IX30 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
SCUBE3Q8IX30 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SCUBE3Q8IX30 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.01■□□□□ 0.63
SCUBE3Q8IX30 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SCUBE3Q8IX30 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SCUBE3Q8IX30 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.01■□□□□ 0.63
SCUBE3Q8IX30 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SCUBE3Q8IX30 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.01■□□□□ 0.63
SCUBE3Q8IX30 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
SCUBE3Q8IX30 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SCUBE3Q8IX30 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SCUBE3Q8IX30 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19■□□□□ 0.63
SCUBE3Q8IX30 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
SCUBE3Q8IX30 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19■□□□□ 0.63
SCUBE3Q8IX30 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19■□□□□ 0.63
SCUBE3Q8IX30 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19■□□□□ 0.63
SCUBE3Q8IX30 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19■□□□□ 0.63
SCUBE3Q8IX30 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19■□□□□ 0.63
SCUBE3Q8IX30 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19■□□□□ 0.63
SCUBE3Q8IX30 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
SCUBE3Q8IX30 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SCUBE3Q8IX30 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
SCUBE3Q8IX30 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19■□□□□ 0.63
SCUBE3Q8IX30 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19■□□□□ 0.63
SCUBE3Q8IX30 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
SCUBE3Q8IX30 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SCUBE3Q8IX30 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19■□□□□ 0.63
SCUBE3Q8IX30 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SCUBE3Q8IX30 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19■□□□□ 0.63
SCUBE3Q8IX30 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19■□□□□ 0.63
SCUBE3Q8IX30 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19■□□□□ 0.63
SCUBE3Q8IX30 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SCUBE3Q8IX30 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19■□□□□ 0.63
SCUBE3Q8IX30 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SCUBE3Q8IX30 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19■□□□□ 0.63
SCUBE3Q8IX30 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19■□□□□ 0.63
SCUBE3Q8IX30 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19■□□□□ 0.63
SCUBE3Q8IX30 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19■□□□□ 0.63
SCUBE3Q8IX30 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SCUBE3Q8IX30 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SCUBE3Q8IX30 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SCUBE3Q8IX30 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SCUBE3Q8IX30 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms