Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CHKAP35790 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CHKAP35790 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
CHKAP35790 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHKAP35790 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHKAP35790 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHKAP35790 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CHKAP35790 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
CHKAP35790 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.1■□□□□ 0.65
CHKAP35790 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHKAP35790 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CHKAP35790 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHKAP35790 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.1■□□□□ 0.65
CHKAP35790 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHKAP35790 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHKAP35790 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CHKAP35790 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CHKAP35790 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHKAP35790 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHKAP35790 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHKAP35790 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CHKAP35790 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.1■□□□□ 0.65
CHKAP35790 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHKAP35790 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.1■□□□□ 0.65
CHKAP35790 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CHKAP35790 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CHKAP35790 PVRIG2P-201ENST00000435460 978 ntBASIC19.1■□□□□ 0.65
CHKAP35790 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHKAP35790 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CHKAP35790 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.1■□□□□ 0.65
CHKAP35790 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.1■□□□□ 0.65
CHKAP35790 KRT18P41-201ENST00000518924 1277 ntBASIC19.1■□□□□ 0.65
CHKAP35790 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.1■□□□□ 0.65
CHKAP35790 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.1■□□□□ 0.65
CHKAP35790 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.1■□□□□ 0.65
CHKAP35790 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CHKAP35790 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.1■□□□□ 0.65
CHKAP35790 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CHKAP35790 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHKAP35790 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CHKAP35790 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHKAP35790 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CHKAP35790 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.1■□□□□ 0.65
CHKAP35790 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHKAP35790 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CHKAP35790 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CHKAP35790 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.1■□□□□ 0.65
CHKAP35790 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHKAP35790 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHKAP35790 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CHKAP35790 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CHKAP35790 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.1■□□□□ 0.65
CHKAP35790 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CHKAP35790 AC093677.2-201ENST00000600169 1863 ntBASIC19.09■□□□□ 0.65
CHKAP35790 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHKAP35790 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CHKAP35790 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHKAP35790 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.09■□□□□ 0.65
CHKAP35790 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.09■□□□□ 0.65
CHKAP35790 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHKAP35790 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHKAP35790 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHKAP35790 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CHKAP35790 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CHKAP35790 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CHKAP35790 MIR662-201ENST00000384847 95 ntBASIC19.09■□□□□ 0.65
CHKAP35790 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.09■□□□□ 0.65
CHKAP35790 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CHKAP35790 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.09■□□□□ 0.65
CHKAP35790 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.09■□□□□ 0.65
CHKAP35790 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CHKAP35790 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.09■□□□□ 0.65
CHKAP35790 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.09■□□□□ 0.65
CHKAP35790 AC093458.2-201ENST00000623150 629 ntBASIC19.09■□□□□ 0.65
CHKAP35790 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHKAP35790 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHKAP35790 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CHKAP35790 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CHKAP35790 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CHKAP35790 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CHKAP35790 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CHKAP35790 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHKAP35790 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CHKAP35790 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.09■□□□□ 0.65
CHKAP35790 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHKAP35790 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
CHKAP35790 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CHKAP35790 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CHKAP35790 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.08■□□□□ 0.65
CHKAP35790 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CHKAP35790 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CHKAP35790 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.08■□□□□ 0.65
CHKAP35790 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CHKAP35790 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.08■□□□□ 0.64
CHKAP35790 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.08■□□□□ 0.64
CHKAP35790 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.08■□□□□ 0.64
CHKAP35790 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.08■□□□□ 0.64
CHKAP35790 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.08■□□□□ 0.64
CHKAP35790 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.08■□□□□ 0.64
CHKAP35790 AC011498.5-201ENST00000592027 486 ntBASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms