Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHGB1Q9Y5G3 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
PCDHGB1Q9Y5G3 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHGB1Q9Y5G3 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
PCDHGB1Q9Y5G3 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
PCDHGB1Q9Y5G3 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHGB1Q9Y5G3 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHGB1Q9Y5G3 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHGB1Q9Y5G3 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHGB1Q9Y5G3 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC22.51■■□□□ 1.19
PCDHGB1Q9Y5G3 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHGB1Q9Y5G3 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHGB1Q9Y5G3 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHGB1Q9Y5G3 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHGB1Q9Y5G3 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHGB1Q9Y5G3 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
PCDHGB1Q9Y5G3 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC22.49■■□□□ 1.19
PCDHGB1Q9Y5G3 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
PCDHGB1Q9Y5G3 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
PCDHGB1Q9Y5G3 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHGB1Q9Y5G3 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
PCDHGB1Q9Y5G3 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
PCDHGB1Q9Y5G3 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC22.47■■□□□ 1.19
PCDHGB1Q9Y5G3 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC22.47■■□□□ 1.19
PCDHGB1Q9Y5G3 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC22.47■■□□□ 1.19
PCDHGB1Q9Y5G3 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHGB1Q9Y5G3 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHGB1Q9Y5G3 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHGB1Q9Y5G3 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHGB1Q9Y5G3 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
PCDHGB1Q9Y5G3 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHGB1Q9Y5G3 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHGB1Q9Y5G3 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHGB1Q9Y5G3 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.19
PCDHGB1Q9Y5G3 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHGB1Q9Y5G3 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHGB1Q9Y5G3 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHGB1Q9Y5G3 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHGB1Q9Y5G3 CAHM-201ENST00000604200 896 ntBASIC22.45■■□□□ 1.18
PCDHGB1Q9Y5G3 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHGB1Q9Y5G3 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHGB1Q9Y5G3 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHGB1Q9Y5G3 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC22.45■■□□□ 1.18
PCDHGB1Q9Y5G3 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHGB1Q9Y5G3 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHGB1Q9Y5G3 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.43■■□□□ 1.18
PCDHGB1Q9Y5G3 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHGB1Q9Y5G3 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
PCDHGB1Q9Y5G3 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC22.43■■□□□ 1.18
PCDHGB1Q9Y5G3 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
PCDHGB1Q9Y5G3 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
PCDHGB1Q9Y5G3 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
PCDHGB1Q9Y5G3 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHGB1Q9Y5G3 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC22.42■■□□□ 1.18
PCDHGB1Q9Y5G3 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC22.42■■□□□ 1.18
PCDHGB1Q9Y5G3 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
PCDHGB1Q9Y5G3 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC22.42■■□□□ 1.18
PCDHGB1Q9Y5G3 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHGB1Q9Y5G3 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHGB1Q9Y5G3 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHGB1Q9Y5G3 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHGB1Q9Y5G3 AL162393.1-201ENST00000437852 946 ntBASIC22.41■■□□□ 1.18
PCDHGB1Q9Y5G3 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHGB1Q9Y5G3 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC22.4■■□□□ 1.18
PCDHGB1Q9Y5G3 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
PCDHGB1Q9Y5G3 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGB1Q9Y5G3 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGB1Q9Y5G3 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGB1Q9Y5G3 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGB1Q9Y5G3 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC22.4■■□□□ 1.18
PCDHGB1Q9Y5G3 AC135983.2-203ENST00000454486 1613 ntBASIC22.39■■□□□ 1.18
PCDHGB1Q9Y5G3 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC22.39■■□□□ 1.17
PCDHGB1Q9Y5G3 AC142381.3-201ENST00000568208 1670 ntBASIC22.39■■□□□ 1.17
PCDHGB1Q9Y5G3 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC22.38■■□□□ 1.17
PCDHGB1Q9Y5G3 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHGB1Q9Y5G3 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
PCDHGB1Q9Y5G3 RPS2-209ENST00000529806 993 ntTSL 3 BASIC22.38■■□□□ 1.17
PCDHGB1Q9Y5G3 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC22.38■■□□□ 1.17
PCDHGB1Q9Y5G3 AP004609.3-201ENST00000610705 1884 ntBASIC22.38■■□□□ 1.17
PCDHGB1Q9Y5G3 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHGB1Q9Y5G3 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
PCDHGB1Q9Y5G3 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC22.38■■□□□ 1.17
PCDHGB1Q9Y5G3 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
PCDHGB1Q9Y5G3 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHGB1Q9Y5G3 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHGB1Q9Y5G3 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHGB1Q9Y5G3 PREB-202ENST00000406567 1910 ntTSL 5 BASIC22.36■■□□□ 1.17
PCDHGB1Q9Y5G3 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
PCDHGB1Q9Y5G3 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHGB1Q9Y5G3 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHGB1Q9Y5G3 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHGB1Q9Y5G3 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHGB1Q9Y5G3 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
PCDHGB1Q9Y5G3 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC22.35■■□□□ 1.17
PCDHGB1Q9Y5G3 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC22.35■■□□□ 1.17
PCDHGB1Q9Y5G3 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
PCDHGB1Q9Y5G3 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22.35■■□□□ 1.17
PCDHGB1Q9Y5G3 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHGB1Q9Y5G3 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHGB1Q9Y5G3 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC22.34■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms