Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC38.83■■■■□ 3.81
CDK11AQ9UQ88 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC38.83■■■■□ 3.81
CDK11AQ9UQ88 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC38.83■■■■□ 3.81
CDK11AQ9UQ88 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC38.83■■■■□ 3.81
CDK11AQ9UQ88 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC38.82■■■■□ 3.81
CDK11AQ9UQ88 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC38.82■■■■□ 3.81
CDK11AQ9UQ88 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC38.81■■■■□ 3.8
CDK11AQ9UQ88 MIR6765-201ENST00000614092 87 ntBASIC38.81■■■■□ 3.8
CDK11AQ9UQ88 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC38.81■■■■□ 3.8
CDK11AQ9UQ88 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC38.8■■■■□ 3.8
CDK11AQ9UQ88 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC38.79■■■■□ 3.8
CDK11AQ9UQ88 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC38.79■■■■□ 3.8
CDK11AQ9UQ88 AC010980.1-201ENST00000587192 1142 ntBASIC38.79■■■■□ 3.8
CDK11AQ9UQ88 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC38.79■■■■□ 3.8
CDK11AQ9UQ88 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC38.78■■■■□ 3.8
CDK11AQ9UQ88 TRIR-205ENST00000592273 783 ntTSL 3 BASIC38.78■■■■□ 3.8
CDK11AQ9UQ88 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC38.77■■■■□ 3.8
CDK11AQ9UQ88 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC38.77■■■■□ 3.8
CDK11AQ9UQ88 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC38.76■■■■□ 3.8
CDK11AQ9UQ88 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC38.76■■■■□ 3.8
CDK11AQ9UQ88 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC38.75■■■■□ 3.79
CDK11AQ9UQ88 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC38.75■■■■□ 3.79
CDK11AQ9UQ88 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC38.75■■■■□ 3.79
CDK11AQ9UQ88 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC38.75■■■■□ 3.79
CDK11AQ9UQ88 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC38.74■■■■□ 3.79
CDK11AQ9UQ88 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC38.73■■■■□ 3.79
CDK11AQ9UQ88 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC38.73■■■■□ 3.79
CDK11AQ9UQ88 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC38.73■■■■□ 3.79
CDK11AQ9UQ88 AC139795.1-202ENST00000500444 432 ntBASIC38.73■■■■□ 3.79
CDK11AQ9UQ88 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC38.73■■■■□ 3.79
CDK11AQ9UQ88 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC38.73■■■■□ 3.79
CDK11AQ9UQ88 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC38.73■■■■□ 3.79
CDK11AQ9UQ88 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC38.72■■■■□ 3.79
CDK11AQ9UQ88 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC38.72■■■■□ 3.79
CDK11AQ9UQ88 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC38.72■■■■□ 3.79
CDK11AQ9UQ88 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC38.72■■■■□ 3.79
CDK11AQ9UQ88 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC38.72■■■■□ 3.79
CDK11AQ9UQ88 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC38.71■■■■□ 3.79
CDK11AQ9UQ88 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC38.71■■■■□ 3.79
CDK11AQ9UQ88 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC38.71■■■■□ 3.79
CDK11AQ9UQ88 HYI-210ENST00000486909 905 ntTSL 5 BASIC38.71■■■■□ 3.79
CDK11AQ9UQ88 AC018755.3-202ENST00000596210 929 ntBASIC38.71■■■■□ 3.79
CDK11AQ9UQ88 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC38.71■■■■□ 3.79
CDK11AQ9UQ88 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC38.71■■■■□ 3.79
CDK11AQ9UQ88 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC38.71■■■■□ 3.79
CDK11AQ9UQ88 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC38.71■■■■□ 3.79
CDK11AQ9UQ88 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC38.71■■■■□ 3.79
CDK11AQ9UQ88 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC38.69■■■■□ 3.78
CDK11AQ9UQ88 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC38.69■■■■□ 3.78
CDK11AQ9UQ88 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC38.69■■■■□ 3.78
CDK11AQ9UQ88 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC38.68■■■■□ 3.78
CDK11AQ9UQ88 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC38.68■■■■□ 3.78
CDK11AQ9UQ88 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC38.68■■■■□ 3.78
CDK11AQ9UQ88 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC38.68■■■■□ 3.78
CDK11AQ9UQ88 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC38.67■■■■□ 3.78
CDK11AQ9UQ88 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC38.67■■■■□ 3.78
CDK11AQ9UQ88 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC38.66■■■■□ 3.78
CDK11AQ9UQ88 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC38.66■■■■□ 3.78
CDK11AQ9UQ88 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC38.66■■■■□ 3.78
CDK11AQ9UQ88 BEX3-202ENST00000372634 753 ntTSL 2 BASIC38.66■■■■□ 3.78
CDK11AQ9UQ88 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC38.66■■■■□ 3.78
CDK11AQ9UQ88 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC38.66■■■■□ 3.78
CDK11AQ9UQ88 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC38.66■■■■□ 3.78
CDK11AQ9UQ88 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC38.65■■■■□ 3.78
CDK11AQ9UQ88 KRT8P33-201ENST00000508125 1423 ntBASIC38.65■■■■□ 3.78
CDK11AQ9UQ88 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC38.65■■■■□ 3.78
CDK11AQ9UQ88 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC38.65■■■■□ 3.78
CDK11AQ9UQ88 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC38.63■■■■□ 3.77
CDK11AQ9UQ88 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC38.63■■■■□ 3.77
CDK11AQ9UQ88 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC38.63■■■■□ 3.77
CDK11AQ9UQ88 AC103834.1-201ENST00000520383 144 ntBASIC38.63■■■■□ 3.77
CDK11AQ9UQ88 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC38.62■■■■□ 3.77
CDK11AQ9UQ88 YBX1P4-201ENST00000392794 808 ntBASIC38.62■■■■□ 3.77
CDK11AQ9UQ88 AL359504.2-201ENST00000605506 1601 ntBASIC38.62■■■■□ 3.77
CDK11AQ9UQ88 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC38.62■■■■□ 3.77
CDK11AQ9UQ88 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC38.61■■■■□ 3.77
CDK11AQ9UQ88 IDNK-203ENST00000405990 629 ntTSL 2 BASIC38.61■■■■□ 3.77
CDK11AQ9UQ88 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC38.6■■■■□ 3.77
CDK11AQ9UQ88 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC38.59■■■■□ 3.77
CDK11AQ9UQ88 PVT1_1.1-201ENST00000615125 194 ntBASIC38.59■■■■□ 3.77
CDK11AQ9UQ88 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC38.58■■■■□ 3.77
CDK11AQ9UQ88 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC38.58■■■■□ 3.77
CDK11AQ9UQ88 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC38.58■■■■□ 3.77
CDK11AQ9UQ88 AC009299.2-201ENST00000482477 511 ntBASIC38.58■■■■□ 3.77
CDK11AQ9UQ88 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC38.58■■■■□ 3.77
CDK11AQ9UQ88 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC38.58■■■■□ 3.77
CDK11AQ9UQ88 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC38.57■■■■□ 3.77
CDK11AQ9UQ88 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC38.55■■■■□ 3.76
CDK11AQ9UQ88 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC38.55■■■■□ 3.76
CDK11AQ9UQ88 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC38.55■■■■□ 3.76
CDK11AQ9UQ88 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC38.55■■■■□ 3.76
CDK11AQ9UQ88 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC38.55■■■■□ 3.76
CDK11AQ9UQ88 MIR4508-201ENST00000584178 70 ntBASIC38.55■■■■□ 3.76
CDK11AQ9UQ88 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC38.54■■■■□ 3.76
CDK11AQ9UQ88 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC38.54■■■■□ 3.76
CDK11AQ9UQ88 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC38.54■■■■□ 3.76
CDK11AQ9UQ88 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC38.53■■■■□ 3.76
CDK11AQ9UQ88 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC38.53■■■■□ 3.76
CDK11AQ9UQ88 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC38.53■■■■□ 3.76
CDK11AQ9UQ88 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC38.53■■■■□ 3.76
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms