Protein–RNA interactions for Protein: Q9H4I9

SMDT1, Essential MCU regulator, mitochondrial, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1Q9H4I9 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SMDT1Q9H4I9 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMDT1Q9H4I9 EBPL-203ENST00000378270 579 ntTSL 2 BASIC19.44■□□□□ 0.7
SMDT1Q9H4I9 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.44■□□□□ 0.7
SMDT1Q9H4I9 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
SMDT1Q9H4I9 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMDT1Q9H4I9 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMDT1Q9H4I9 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
SMDT1Q9H4I9 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMDT1Q9H4I9 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMDT1Q9H4I9 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMDT1Q9H4I9 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.43■□□□□ 0.7
SMDT1Q9H4I9 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMDT1Q9H4I9 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SMDT1Q9H4I9 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMDT1Q9H4I9 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMDT1Q9H4I9 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMDT1Q9H4I9 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMDT1Q9H4I9 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC19.42■□□□□ 0.7
SMDT1Q9H4I9 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMDT1Q9H4I9 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SMDT1Q9H4I9 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMDT1Q9H4I9 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMDT1Q9H4I9 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMDT1Q9H4I9 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMDT1Q9H4I9 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
SMDT1Q9H4I9 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMDT1Q9H4I9 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMDT1Q9H4I9 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SMDT1Q9H4I9 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SMDT1Q9H4I9 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMDT1Q9H4I9 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.4■□□□□ 0.7
SMDT1Q9H4I9 WASH5P-204ENST00000632292 975 ntBASIC19.4■□□□□ 0.7
SMDT1Q9H4I9 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SMDT1Q9H4I9 CLDN5-201ENST00000403084 2357 ntBASIC19.39■□□□□ 0.69
SMDT1Q9H4I9 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMDT1Q9H4I9 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMDT1Q9H4I9 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMDT1Q9H4I9 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMDT1Q9H4I9 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SMDT1Q9H4I9 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMDT1Q9H4I9 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMDT1Q9H4I9 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMDT1Q9H4I9 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMDT1Q9H4I9 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMDT1Q9H4I9 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMDT1Q9H4I9 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.37■□□□□ 0.69
SMDT1Q9H4I9 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SMDT1Q9H4I9 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SMDT1Q9H4I9 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
SMDT1Q9H4I9 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
SMDT1Q9H4I9 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.37■□□□□ 0.69
SMDT1Q9H4I9 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMDT1Q9H4I9 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMDT1Q9H4I9 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMDT1Q9H4I9 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SMDT1Q9H4I9 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMDT1Q9H4I9 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC19.36■□□□□ 0.69
SMDT1Q9H4I9 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
SMDT1Q9H4I9 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
SMDT1Q9H4I9 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SMDT1Q9H4I9 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMDT1Q9H4I9 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMDT1Q9H4I9 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMDT1Q9H4I9 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SMDT1Q9H4I9 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMDT1Q9H4I9 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.35■□□□□ 0.69
SMDT1Q9H4I9 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMDT1Q9H4I9 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SMDT1Q9H4I9 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMDT1Q9H4I9 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SMDT1Q9H4I9 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC19.35■□□□□ 0.69
SMDT1Q9H4I9 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SMDT1Q9H4I9 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMDT1Q9H4I9 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMDT1Q9H4I9 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.34■□□□□ 0.69
SMDT1Q9H4I9 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMDT1Q9H4I9 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMDT1Q9H4I9 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMDT1Q9H4I9 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SMDT1Q9H4I9 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SMDT1Q9H4I9 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
SMDT1Q9H4I9 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.33■□□□□ 0.69
SMDT1Q9H4I9 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
SMDT1Q9H4I9 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SMDT1Q9H4I9 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SMDT1Q9H4I9 WHAMMP3-201ENST00000611636 1609 ntBASIC19.33■□□□□ 0.68
SMDT1Q9H4I9 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SMDT1Q9H4I9 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SMDT1Q9H4I9 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMDT1Q9H4I9 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMDT1Q9H4I9 AC127502.1-201ENST00000399971 1502 ntBASIC19.31■□□□□ 0.68
SMDT1Q9H4I9 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMDT1Q9H4I9 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMDT1Q9H4I9 AP004609.3-201ENST00000610705 1884 ntBASIC19.31■□□□□ 0.68
SMDT1Q9H4I9 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SMDT1Q9H4I9 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
SMDT1Q9H4I9 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMDT1Q9H4I9 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
SMDT1Q9H4I9 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms