Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
CNTNAP4Q9C0A0 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
CNTNAP4Q9C0A0 AC139795.1-202ENST00000500444 432 ntBASIC31.89■■■□□ 2.7
CNTNAP4Q9C0A0 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC31.89■■■□□ 2.7
CNTNAP4Q9C0A0 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
CNTNAP4Q9C0A0 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
CNTNAP4Q9C0A0 PVT1_1.1-201ENST00000615125 194 ntBASIC31.89■■■□□ 2.7
CNTNAP4Q9C0A0 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
CNTNAP4Q9C0A0 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC31.88■■■□□ 2.69
CNTNAP4Q9C0A0 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
CNTNAP4Q9C0A0 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
CNTNAP4Q9C0A0 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC31.88■■■□□ 2.69
CNTNAP4Q9C0A0 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC31.88■■■□□ 2.69
CNTNAP4Q9C0A0 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC31.87■■■□□ 2.69
CNTNAP4Q9C0A0 AL592295.1-201ENST00000400984 884 ntBASIC31.87■■■□□ 2.69
CNTNAP4Q9C0A0 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC31.87■■■□□ 2.69
CNTNAP4Q9C0A0 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
CNTNAP4Q9C0A0 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
CNTNAP4Q9C0A0 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
CNTNAP4Q9C0A0 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC31.85■■■□□ 2.69
CNTNAP4Q9C0A0 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC31.85■■■□□ 2.69
CNTNAP4Q9C0A0 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC31.85■■■□□ 2.69
CNTNAP4Q9C0A0 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC31.85■■■□□ 2.69
CNTNAP4Q9C0A0 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC31.85■■■□□ 2.69
CNTNAP4Q9C0A0 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC31.85■■■□□ 2.69
CNTNAP4Q9C0A0 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
CNTNAP4Q9C0A0 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC31.84■■■□□ 2.69
CNTNAP4Q9C0A0 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
CNTNAP4Q9C0A0 YBX1P4-201ENST00000392794 808 ntBASIC31.83■■■□□ 2.69
CNTNAP4Q9C0A0 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
CNTNAP4Q9C0A0 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC31.83■■■□□ 2.69
CNTNAP4Q9C0A0 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
CNTNAP4Q9C0A0 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC31.83■■■□□ 2.69
CNTNAP4Q9C0A0 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC31.82■■■□□ 2.68
CNTNAP4Q9C0A0 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
CNTNAP4Q9C0A0 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC31.82■■■□□ 2.68
CNTNAP4Q9C0A0 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
CNTNAP4Q9C0A0 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
CNTNAP4Q9C0A0 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
CNTNAP4Q9C0A0 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC31.81■■■□□ 2.68
CNTNAP4Q9C0A0 HYI-210ENST00000486909 905 ntTSL 5 BASIC31.81■■■□□ 2.68
CNTNAP4Q9C0A0 HES6-204ENST00000409182 863 ntTSL 2 BASIC31.8■■■□□ 2.68
CNTNAP4Q9C0A0 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC31.8■■■□□ 2.68
CNTNAP4Q9C0A0 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC31.8■■■□□ 2.68
CNTNAP4Q9C0A0 MIR4508-201ENST00000584178 70 ntBASIC31.8■■■□□ 2.68
CNTNAP4Q9C0A0 AC018755.3-202ENST00000596210 929 ntBASIC31.8■■■□□ 2.68
CNTNAP4Q9C0A0 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC31.8■■■□□ 2.68
CNTNAP4Q9C0A0 AP002414.2-202ENST00000590929 1450 ntBASIC31.78■■■□□ 2.68
CNTNAP4Q9C0A0 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
CNTNAP4Q9C0A0 GUSBP5-201ENST00000418136 578 ntBASIC31.77■■■□□ 2.68
CNTNAP4Q9C0A0 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC31.77■■■□□ 2.68
CNTNAP4Q9C0A0 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC31.77■■■□□ 2.68
CNTNAP4Q9C0A0 IDNK-203ENST00000405990 629 ntTSL 2 BASIC31.76■■■□□ 2.68
CNTNAP4Q9C0A0 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC31.76■■■□□ 2.68
CNTNAP4Q9C0A0 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC31.75■■■□□ 2.67
CNTNAP4Q9C0A0 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
CNTNAP4Q9C0A0 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC31.75■■■□□ 2.67
CNTNAP4Q9C0A0 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
CNTNAP4Q9C0A0 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
CNTNAP4Q9C0A0 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC31.74■■■□□ 2.67
CNTNAP4Q9C0A0 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC31.74■■■□□ 2.67
CNTNAP4Q9C0A0 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC31.74■■■□□ 2.67
CNTNAP4Q9C0A0 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC31.74■■■□□ 2.67
CNTNAP4Q9C0A0 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC31.73■■■□□ 2.67
CNTNAP4Q9C0A0 IDNK-201ENST00000376417 511 ntTSL 5 BASIC31.73■■■□□ 2.67
CNTNAP4Q9C0A0 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
CNTNAP4Q9C0A0 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC31.73■■■□□ 2.67
CNTNAP4Q9C0A0 OR2A1-AS1-204ENST00000470435 602 ntBASIC31.73■■■□□ 2.67
CNTNAP4Q9C0A0 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC31.72■■■□□ 2.67
CNTNAP4Q9C0A0 ABCB10P3-201ENST00000561950 2166 ntBASIC31.72■■■□□ 2.67
CNTNAP4Q9C0A0 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC31.71■■■□□ 2.67
CNTNAP4Q9C0A0 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
CNTNAP4Q9C0A0 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
CNTNAP4Q9C0A0 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
CNTNAP4Q9C0A0 AL139393.2-201ENST00000608721 2025 ntBASIC31.7■■■□□ 2.67
CNTNAP4Q9C0A0 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
CNTNAP4Q9C0A0 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC31.69■■■□□ 2.66
CNTNAP4Q9C0A0 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
CNTNAP4Q9C0A0 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC31.69■■■□□ 2.66
CNTNAP4Q9C0A0 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC31.68■■■□□ 2.66
CNTNAP4Q9C0A0 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC31.68■■■□□ 2.66
CNTNAP4Q9C0A0 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC31.68■■■□□ 2.66
CNTNAP4Q9C0A0 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC31.68■■■□□ 2.66
CNTNAP4Q9C0A0 AC103724.3-201ENST00000564481 992 ntBASIC31.68■■■□□ 2.66
CNTNAP4Q9C0A0 AC131212.1-201ENST00000613771 668 ntBASIC31.68■■■□□ 2.66
CNTNAP4Q9C0A0 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC31.68■■■□□ 2.66
CNTNAP4Q9C0A0 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
CNTNAP4Q9C0A0 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
CNTNAP4Q9C0A0 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC31.67■■■□□ 2.66
CNTNAP4Q9C0A0 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC31.67■■■□□ 2.66
CNTNAP4Q9C0A0 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
CNTNAP4Q9C0A0 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC31.66■■■□□ 2.66
CNTNAP4Q9C0A0 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC31.66■■■□□ 2.66
CNTNAP4Q9C0A0 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC31.66■■■□□ 2.66
CNTNAP4Q9C0A0 AL359504.2-201ENST00000605506 1601 ntBASIC31.65■■■□□ 2.66
CNTNAP4Q9C0A0 PRTG-204ENST00000561292 833 ntTSL 3 BASIC31.65■■■□□ 2.66
CNTNAP4Q9C0A0 THA1P-201ENST00000590384 1145 ntBASIC31.65■■■□□ 2.66
CNTNAP4Q9C0A0 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
CNTNAP4Q9C0A0 AC019069.1-201ENST00000610008 1333 ntBASIC31.64■■■□□ 2.66
CNTNAP4Q9C0A0 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC31.64■■■□□ 2.66
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms