Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
LCE3DQ9BYE3 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC6.65□□□□□ -1.34
LCE3DQ9BYE3 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC6.65□□□□□ -1.34
LCE3DQ9BYE3 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
LCE3DQ9BYE3 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC6.65□□□□□ -1.35
LCE3DQ9BYE3 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.35
LCE3DQ9BYE3 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.35
LCE3DQ9BYE3 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC6.65□□□□□ -1.35
LCE3DQ9BYE3 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC6.65□□□□□ -1.35
LCE3DQ9BYE3 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
LCE3DQ9BYE3 LTK-203ENST00000453182 2412 ntTSL 2 BASIC6.65□□□□□ -1.35
LCE3DQ9BYE3 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC6.64□□□□□ -1.35
LCE3DQ9BYE3 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
LCE3DQ9BYE3 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
LCE3DQ9BYE3 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC6.64□□□□□ -1.35
LCE3DQ9BYE3 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
LCE3DQ9BYE3 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
LCE3DQ9BYE3 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
LCE3DQ9BYE3 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
LCE3DQ9BYE3 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
LCE3DQ9BYE3 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
LCE3DQ9BYE3 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC6.64□□□□□ -1.35
LCE3DQ9BYE3 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
LCE3DQ9BYE3 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
LCE3DQ9BYE3 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
LCE3DQ9BYE3 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
LCE3DQ9BYE3 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
LCE3DQ9BYE3 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
LCE3DQ9BYE3 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
LCE3DQ9BYE3 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
LCE3DQ9BYE3 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
LCE3DQ9BYE3 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
LCE3DQ9BYE3 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
LCE3DQ9BYE3 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC6.63□□□□□ -1.35
LCE3DQ9BYE3 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
LCE3DQ9BYE3 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC6.63□□□□□ -1.35
LCE3DQ9BYE3 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
LCE3DQ9BYE3 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
LCE3DQ9BYE3 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
LCE3DQ9BYE3 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
LCE3DQ9BYE3 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
LCE3DQ9BYE3 DYNLL1-208ENST00000550178 581 ntBASIC6.63□□□□□ -1.35
LCE3DQ9BYE3 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
LCE3DQ9BYE3 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
LCE3DQ9BYE3 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
LCE3DQ9BYE3 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC6.63□□□□□ -1.35
LCE3DQ9BYE3 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
LCE3DQ9BYE3 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
LCE3DQ9BYE3 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
LCE3DQ9BYE3 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
LCE3DQ9BYE3 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
LCE3DQ9BYE3 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
LCE3DQ9BYE3 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
LCE3DQ9BYE3 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
LCE3DQ9BYE3 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC6.62□□□□□ -1.35
LCE3DQ9BYE3 DUSP8P4-201ENST00000399538 1761 ntBASIC6.62□□□□□ -1.35
LCE3DQ9BYE3 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
LCE3DQ9BYE3 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
LCE3DQ9BYE3 AP002414.2-202ENST00000590929 1450 ntBASIC6.62□□□□□ -1.35
LCE3DQ9BYE3 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
LCE3DQ9BYE3 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC6.62□□□□□ -1.35
LCE3DQ9BYE3 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
LCE3DQ9BYE3 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
LCE3DQ9BYE3 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
LCE3DQ9BYE3 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC6.62□□□□□ -1.35
LCE3DQ9BYE3 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
LCE3DQ9BYE3 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
LCE3DQ9BYE3 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
LCE3DQ9BYE3 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
LCE3DQ9BYE3 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
LCE3DQ9BYE3 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC6.62□□□□□ -1.35
LCE3DQ9BYE3 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC6.62□□□□□ -1.35
LCE3DQ9BYE3 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
LCE3DQ9BYE3 AC100797.4-201ENST00000631653 1827 ntBASIC6.62□□□□□ -1.35
LCE3DQ9BYE3 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
LCE3DQ9BYE3 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
LCE3DQ9BYE3 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC6.61□□□□□ -1.35
LCE3DQ9BYE3 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
LCE3DQ9BYE3 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
LCE3DQ9BYE3 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
LCE3DQ9BYE3 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
LCE3DQ9BYE3 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
LCE3DQ9BYE3 AC092803.2-201ENST00000564287 1899 ntBASIC6.61□□□□□ -1.35
LCE3DQ9BYE3 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
LCE3DQ9BYE3 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
LCE3DQ9BYE3 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
LCE3DQ9BYE3 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC6.61□□□□□ -1.35
LCE3DQ9BYE3 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
LCE3DQ9BYE3 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
LCE3DQ9BYE3 RARA-203ENST00000394086 2008 ntTSL 2 BASIC6.6□□□□□ -1.35
LCE3DQ9BYE3 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
LCE3DQ9BYE3 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
LCE3DQ9BYE3 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
LCE3DQ9BYE3 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
LCE3DQ9BYE3 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
LCE3DQ9BYE3 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC6.6□□□□□ -1.35
LCE3DQ9BYE3 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
LCE3DQ9BYE3 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
LCE3DQ9BYE3 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
LCE3DQ9BYE3 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms