Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
SEC22CQ9BRL7 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SEC22CQ9BRL7 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SEC22CQ9BRL7 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.81■□□□□ 0.92
SEC22CQ9BRL7 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SEC22CQ9BRL7 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SEC22CQ9BRL7 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
SEC22CQ9BRL7 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.81■□□□□ 0.92
SEC22CQ9BRL7 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
SEC22CQ9BRL7 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
SEC22CQ9BRL7 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SEC22CQ9BRL7 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SEC22CQ9BRL7 AP004609.3-201ENST00000610705 1884 ntBASIC20.8■□□□□ 0.92
SEC22CQ9BRL7 AL133380.1-201ENST00000506013 324 ntBASIC20.8■□□□□ 0.92
SEC22CQ9BRL7 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
SEC22CQ9BRL7 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
SEC22CQ9BRL7 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.8■□□□□ 0.92
SEC22CQ9BRL7 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SEC22CQ9BRL7 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC20.79■□□□□ 0.92
SEC22CQ9BRL7 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.79■□□□□ 0.92
SEC22CQ9BRL7 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SEC22CQ9BRL7 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
SEC22CQ9BRL7 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SEC22CQ9BRL7 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SEC22CQ9BRL7 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SEC22CQ9BRL7 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SEC22CQ9BRL7 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SEC22CQ9BRL7 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SEC22CQ9BRL7 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
SEC22CQ9BRL7 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.76■□□□□ 0.91
SEC22CQ9BRL7 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SEC22CQ9BRL7 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SEC22CQ9BRL7 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
SEC22CQ9BRL7 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
SEC22CQ9BRL7 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
SEC22CQ9BRL7 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.75■□□□□ 0.91
SEC22CQ9BRL7 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.75■□□□□ 0.91
SEC22CQ9BRL7 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.74■□□□□ 0.91
SEC22CQ9BRL7 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SEC22CQ9BRL7 AC142381.3-201ENST00000568208 1670 ntBASIC20.74■□□□□ 0.91
SEC22CQ9BRL7 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SEC22CQ9BRL7 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SEC22CQ9BRL7 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SEC22CQ9BRL7 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SEC22CQ9BRL7 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SEC22CQ9BRL7 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
SEC22CQ9BRL7 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SEC22CQ9BRL7 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SEC22CQ9BRL7 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.73■□□□□ 0.91
SEC22CQ9BRL7 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
SEC22CQ9BRL7 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SEC22CQ9BRL7 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SEC22CQ9BRL7 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SEC22CQ9BRL7 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SEC22CQ9BRL7 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.73■□□□□ 0.91
SEC22CQ9BRL7 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.72■□□□□ 0.91
SEC22CQ9BRL7 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SEC22CQ9BRL7 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SEC22CQ9BRL7 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC20.72■□□□□ 0.91
SEC22CQ9BRL7 AL139125.2-201ENST00000623134 1869 ntBASIC20.72■□□□□ 0.91
SEC22CQ9BRL7 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SEC22CQ9BRL7 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SEC22CQ9BRL7 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SEC22CQ9BRL7 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SEC22CQ9BRL7 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
SEC22CQ9BRL7 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SEC22CQ9BRL7 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
SEC22CQ9BRL7 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SEC22CQ9BRL7 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
SEC22CQ9BRL7 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SEC22CQ9BRL7 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC20.71■□□□□ 0.91
SEC22CQ9BRL7 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SEC22CQ9BRL7 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
SEC22CQ9BRL7 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SEC22CQ9BRL7 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SEC22CQ9BRL7 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
SEC22CQ9BRL7 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
SEC22CQ9BRL7 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SEC22CQ9BRL7 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SEC22CQ9BRL7 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.7■□□□□ 0.9
SEC22CQ9BRL7 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SEC22CQ9BRL7 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SEC22CQ9BRL7 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
SEC22CQ9BRL7 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
SEC22CQ9BRL7 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.7■□□□□ 0.9
SEC22CQ9BRL7 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
SEC22CQ9BRL7 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SEC22CQ9BRL7 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SEC22CQ9BRL7 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
SEC22CQ9BRL7 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
SEC22CQ9BRL7 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SEC22CQ9BRL7 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
SEC22CQ9BRL7 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
SEC22CQ9BRL7 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SEC22CQ9BRL7 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
SEC22CQ9BRL7 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SEC22CQ9BRL7 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.68■□□□□ 0.9
SEC22CQ9BRL7 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SEC22CQ9BRL7 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SEC22CQ9BRL7 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms